arsa (arsa,LOC101072550)


Basic Information

Item Value
gene id arsa
gene name arsa,LOC101072550
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 13781377 ~ 13785751 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808549.1
CTTTCCGCAAGTGAACACGTGACGTTTTGTTTTGGTTCCTCTCTCCTTTCTACGGACCTGACGGCTATCTTACTCTATGCTATCTTCACATGCAGGACGACGCAGAATGGACAACATCGGCTTCttctttttaaacacttttcttttttgcaccTGCTTGGCTTCCCCGCCGAATTTCGTCCTCCTCTTCGCAGATGATTTAGGTTTCGGGGACTTAGGTTGTTATGGACACCCCAGCTCACTCACTCCCAACCTGGACCGCCTGGCAGCGGGAGGACTCCGGTTTACAGATTTCTACTGCACCAGCCCCGTCTGCTCCCCGTCCAGGGCCTCATTGTTGACGGGGCGCTATCAGACCCGCTCAGGTATCTACCCGGGAGTGTTGTACCCAGGCTCTAGAGGTGGTCTTCCTCTGAACGAGACCACAATTGCGGAAGTGTTGAAACCTATGGGCTATGCTACTGCTGCCATAGGGAAGTGGCACTTAGGAGTAGGGGCCAATGGGATGTTTCTTCCAACCAGGCAGGGGTTTGACCAGTACCTGGGGATCCCCTACTCCCACGACATGGGCCCTTGTTGGAACCTGACTTGTTTCCCTCCAGATGTTAAGTGTTTTGGATTGTGTGACGTTGGCACTGTTACTGTCCCACTAATGCTCAATGAGGTCATCAAGCAGCAGCCAGTCAACTTCCTCGATCTGGAAAGGGCTTACACTGATTTTGCAACCAATTTCATTACCACATCAGCCAAGAAAAAACAACCTTTCTTTCTCTACTACCCTTCCCATCACACCCACTACCCCCAGTATGCAGGTCAAGGGGCAGCCGGGCGCACTTTAAGGGGCCCATTTGGAGATGCTCTGTTTGAGTTTGACAACACAATAGGGAACCTACTAACAACCCTTGAGAAGACAGGAGTGACCAACAACACACTGGTCTTCTTCACTTCTGACAATGGGCCTGAACTGATGCGTTTGTCTCGTGGAGGTAACGCTGGCCCTCTGAAATGTGGAAAAGGCACCACGTATGAGGGGGGCATGAGAGAGCCAGCCATCGCCTTTTGGCCAGGGACCATCAGGCCAGGTGTGACTCATGAGATGGCCAGCACTCTAGATATCCTCCCCACCATCGCAAGTCTGGCAGGAGCCAAACTACCCCAGGTGATGCTGGATGGGGTCGATATGACAGAAATCCTTGTCAACCAAGGAAAGAGTAAAAGGGAGACAATGGTGTTCTATCCCACAGATCCCGATGAGAAGTATGGCCTGTTTGCTCTCAGGCTAGGGAAGTACAAGGCCCACTTCTATACGCGAGGTGCTACCCACAGCGGTACTACCCCGGACCAAGACTGCCCAGTATTTGCAGTCCTCAAGGCCCACGACCCCCCTCTTATTTTCGACCTGGAGGCTGACCCCTCGGAGCACTACCCTCTCCCCCTGACGGGAAAACCCGACCTCCAAGCCCTGCTGGAGAGGATCAAGAAAGCCAAGGAGCAGTTTGAAGCCTCCATGGTATTTGGAGAGAGCCAGATATCAAAAGGAACAGACCCCGACCTGGAGCCTTGCTGCAATCCTCAGTGTATCCCCAAGCCCAGCTGCTGCAAGTGTTGATGGGACAAACTCCCACAATCGCTGAGAGACAATGTGGGAAAGCCTGGAGCTTACTGCACTGATTTTTGCCTCAAGATTGCTTTGCACAAGATGTGATGCTGATTTTGTAATTCCCTGATAATGCATGGCCACTTGCTTGTGTTACTGAAAAGTAACATTGTAAACACTCCTCAATGAGGAGATGATTTTCTTAATTTTGATATTGACTACTTTTAGAACTAATGTATcacaatgtactgtatttttccTGACTATTTGAACACGTTTTATTCATTGATTTATGATTTCATTTTCCACTCAACATTCTTTATAATCATAAGATTTGGACTTTATGTGAAAACGCTTTGCAACATATTtcaatcaaacaaacaatcaaGAGTAGAGCTCAACAATAAAGACAACAATAAAGGTTTCGGACATCAAGCATATATTTTATTCATAAGACCAAACCCATGACAAGTCAGATtgatttttttgtcaatttttttttcctttgtttttccctggaattttaattcattttacaagtcctttgtttttaaagatacaAGATAGGATATGTTTGTTCTGTCACATACTGTTTTGCTCTAGGTATACAGTGAAGAATCTTGTTGATGTAATAAAGTCAAAAGTTTGGTTTAACTGTTAA
>XM_039808550.1
CTTTCCGCAAGTGAACACGTGACGTTTTGTTTTGGTTCCTCTCTCCTTTCTACGGACCTGACGGCTATCTTACTCTATGCTATCTTCACATGCAGGACGACGCAGAATGGACAACATCGGCTTCttctttttaaacacttttcttttttgcaccTGCTTGGCTTCCCCGCCGAATTTCGTCCTCCTCTTCGCAGATGATTTAGGTTTCGGGGACTTAGGTTGTTATGGACACCCCAGCTCACTCACTCCCAACCTGGACCGCCTGGCAGCGGGAGGACTCCGGTTTACAGATTTCTACTGCACCAGCCCCGTCTGCTCCCCGTCCAGGGCCTCATTGTTGACGGGGCGCTATCAGACCCGCTCAGGTATCTACCCGGGAGTGTTGTACCCAGGCTCTAGAGGTGGTCTTCCTCTGAACGAGACCACAATTGCGGAAGTGTTGAAACCTATGGGCTATGCTACTGCTGCCATAGGGAAGTGGCACTTAGGAGTAGGGGCCAATGGGATGTTTCTTCCAACCAGGCAGGGGTTTGACCAGTACCTGGGGATCCCCTACTCCCACGACATGCACACCCACTACCCCCAGTATGCAGGTCAAGGGGCAGCCGGGCGCACTTTAAGGGGCCCATTTGGAGATGCTCTGTTTGAGTTTGACAACACAATAGGGAACCTACTAACAACCCTTGAGAAGACAGGAGTGACCAACAACACACTGGTCTTCTTCACTTCTGACAATGGGCCTGAACTGATGCGTTTGTCTCGTGGAGGTAACGCTGGCCCTCTGAAATGTGGAAAAGGCACCACGTATGAGGGGGGCATGAGAGAGCCAGCCATCGCCTTTTGGCCAGGGACCATCAGGCCAGGTGTGACTCATGAGATGGCCAGCACTCTAGATATCCTCCCCACCATCGCAAGTCTGGCAGGAGCCAAACTACCCCAGGTGATGCTGGATGGGGTCGATATGACAGAAATCCTTGTCAACCAAGGAAAGAGTAAAAGGGAGACAATGGTGTTCTATCCCACAGATCCCGATGAGAAGTATGGCCTGTTTGCTCTCAGGCTAGGGAAGTACAAGGCCCACTTCTATACGCGAGGTGCTACCCACAGCGGTACTACCCCGGACCAAGACTGCCCAGTATTTGCAGTCCTCAAGGCCCACGACCCCCCTCTTATTTTCGACCTGGAGGCTGACCCCTCGGAGCACTACCCTCTCCCCCTGACGGGAAAACCCGACCTCCAAGCCCTGCTGGAGAGGATCAAGAAAGCCAAGGAGCAGTTTGAAGCCTCCATGGTATTTGGAGAGAGCCAGATATCAAAAGGAACAGACCCCGACCTGGAGCCTTGCTGCAATCCTCAGTGTATCCCCAAGCCCAGCTGCTGCAAGTGTTGATGGGACAAACTCCCACAATCGCTGAGAGACAATGTGGGAAAGCCTGGAGCTTACTGCACTGATTTTTGCCTCAAGATTGCTTTGCACAAGATGTGATGCTGATTTTGTAATTCCCTGATAATGCATGGCCACTTGCTTGTGTTACTGAAAAGTAACATTGTAAACACTCCTCAATGAGGAGATGATTTTCTTAATTTTGATATTGACTACTTTTAGAACTAATGTATcacaatgtactgtatttttccTGACTATTTGAACACGTTTTATTCATTGATTTATGATTTCATTTTCCACTCAACATTCTTTATAATCATAAGATTTGGACTTTATGTGAAAACGCTTTGCAACATATTtcaatcaaacaaacaatcaaGAGTAGAGCTCAACAATAAAGACAACAATAAAGGTTTCGGACATCAAGCATATATTTTATTCATAAGACCAAACCCATGACAAGTCAGATtgatttttttgtcaatttttttttcctttgtttttccctggaattttaattcattttacaagtcctttgtttttaaagatacaAGATAGGATATGTTTGTTCTGTCACATACTGTTTTGCTCTAGGTATACAGTGAAGAATCTTGTTGATGTAATAAAGTCAAAAGTTTGGTTTAACTGTTAA

Function

symbol description
arsa Predicted to enable arylsulfatase activity. Human ortholog(s) of this gene implicated in metachromatic leukodystrophy. Orthologous to human ARSA (arylsulfatase A).

NR:

description
arylsulfatase A

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008484 sulfuric ester hydrolase activity molecular_function

KEGG:

id description
K01134 ARSA; arylsulfatase A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808549.1 True 2258 mRNA 0.47 8 13781377 13785751
XM_039808550.1 False 2039 mRNA 0.47 7 13781377 13785751

Neighbor

gene id symbol gene type direction distance location
LOC120563982 pgc coding downstream 20044 13758290 ~ 13761333 (-)
chkb chkb,LOC100699097,LOC106532760,LOC102775816 coding downstream 41277 13727188 ~ 13740100 (-)
LOC120563649 LOC103364023,LOC104941359 coding downstream 55018 13722783 ~ 13726359 (-)
cpt1b cpt1b coding downstream 58989 13709986 ~ 13722388 (-)
prpf18 prpf18 coding downstream 88045 13686198 ~ 13693332 (-)
rabl2 rabl2b,rabl2a,LOC102798136 coding upstream 236296 14022047 ~ 14027064 (-)
odf3b NA coding upstream 242147 14027898 ~ 14030995 (-)
LOC120563866 LOC100700167,LOC108229827,LOC102796952,LOC103368207,LOC106520317 coding upstream 253678 14039429 ~ 14046318 (-)
neto2b LOC103368211,LOC104965107 coding upstream 268201 14053952 ~ 14062743 (-)
terb1 terb1 coding upstream 293425 14079176 ~ 14090593 (-)
G84597 NA non-coding downstream 95908 13683824 ~ 13685469 (-)
G84592 NA non-coding downstream 136529 13644417 ~ 13644848 (-)
G84585 NA non-coding downstream 336765 13434739 ~ 13444612 (-)
G84536 NA non-coding downstream 456119 13322182 ~ 13325258 (-)
G84528 NA non-coding downstream 508848 13271252 ~ 13272529 (-)
G84719 NA non-coding upstream 286882 14072633 ~ 14072948 (-)
G84751 LOC103368197 non-coding upstream 451831 14237582 ~ 14238451 (-)
G84752 LOC101063650,LOC106561215,LOC104965117 non-coding upstream 454770 14240521 ~ 14241054 (-)
G84760 NA non-coding upstream 476952 14262703 ~ 14263115 (-)
G84761 NA non-coding upstream 477665 14263416 ~ 14263741 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other downstream 162591 13573831 ~ 13618786 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other downstream 396172 13325973 ~ 13385205 (-)
prr5a prr5,LOC103371545 other downstream 525284 13246828 ~ 13256093 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other downstream 550282 13230617 ~ 13231095 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 1636831 12141523 ~ 12144546 (-)
zgc:77752 NA other upstream 245353 14031104 ~ 14037716 (-)
LOC120564470 NA other upstream 437446 14223197 ~ 14236952 (-)
LOC120563775 cacna2d1,LOC104952157 other upstream 716145 14501896 ~ 14558228 (-)
si:ch1073-390k14.1 LOC103375950 other upstream 1176109 14961860 ~ 14967783 (-)
G85014 ppp6r2,LOC103370604 other upstream 1280288 15066039 ~ 15073350 (-)

Expression


Co-expression Network