LOC120563982 (pgc)


Basic Information

Item Value
gene id LOC120563982
gene name pgc
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 13758290 ~ 13761333 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808551.1
ATGAAGTGTCTTGTTGCTGTTTTGGTCTTTGTGGTGCTCGCAGAGGGACTTAAAGTAAAGATCCCTCTGCAGAAGCACAAATCCATGCGTGAGACCCTGGGAGAGAAAGGGATCAAGATACCTTACCAGGATCCGGCTCTCAAGTACTACCCCGAACAGTTCGCCGGCTCTGCCAGCATGTACATCAATAACTACGCTGATACCACCTACTTTGGCGCCATCAGTATTGGAACACCCCCCCAGTCCCTCCAAGTGCTGTTTGACACCGGCTCTTCCAACCTGTGGGTGGACTCCACCTACTGTAACACTCAGGCCTGCAacgcacacacaaagtTCGACCCCCAGCAGTCGTCTACCTTCTCTGCCAATGGACAGAGTGTCTACCTACCCTATGGAGCTGGAAGCCTCTATGGACAGCTGGGATATGACACTGTCAATGTAGGCGGCATTGTGGTCACAAACCAGGAGATCGGTCTGAGCACACAGGAGCCTAGTAACCCCTTTCTGGCTGCCAAGTTTGATGGCATCCTCGGCCTGGCCTATCCAGGCATCTCAGCTGGAGGACAGACTCCTGTCATGGACAACATGATTTCTCAAGACCTGCTGAATGACGACTTATTTGCTTTCTACCTGTCCAGGGGAGGGCAGCAGGGCAGTGAGCTCTCTTTTGGAGGAGTGGACAACAGCATGTACCAGGGCCAGATCTACTGGACCCCTGTCACCTCTGAGACCTACTGGCAGATCGGCGTTCAAGGATTCCAGATCAATGGCCAAGAGACCAGCTGGTGCTCTCAGGGCTGCCAGTCCATTGTGGACACTGGAACCTCATCGCTGACCGCCCCAAGCCAGTTTATGGGTAACATCATGCAGGCCATTGGAGCTCAACAGAGTCAATATGGAATGTACATGGTGGACTGCAGCCAAATCAACAACCTGCCAACTCTCAGCTTTGTTATCAGCGGAACTGCCTTCCCTCTGCCTCCTTCTGCTTACATCGAACAGCAAAACCAGAATGGATACCAGTTCTGTTCAGTGAACATCAACCCCACCTACCTGCCCTCTCAGAATGGCCAGCCCCTGTGGATCTTTGGAGACGTGTTCCTCAGAGAGTACTACTCTGTCTATGACCGCACCAACAACCAAGTCGGCTTTGCATCAGCTGTCTAACTGTCGTCAGTGTAACCTAACCTGACCATAAACCTAATCAGATAAGATTTAAAAGTCTGTGTCCACTCAAACACATATATTGTCAAATAATATTGTTCTACATTTATTGTACATCCTCAAATTGGTAGATTCAATTggatttgaatattaaaaacgGAAAAATGTGTCCATAAAATTGCATCATCCTCAAGCAGAATAAATTTAAAATGCTCAC

Function

symbol description
pgc Enables aspartic-type endopeptidase activity. Involved in positive regulation of antibacterial peptide production. Located in extracellular space.

NR:

description
PREDICTED: gastricsin

GO: NA

KEGG:

id description
K01377 PGC; gastricsin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808551.1 True 1381 mRNA 0.49 9 13758290 13761333

Neighbor

gene id symbol gene type direction distance location
chkb chkb,LOC100699097,LOC106532760,LOC102775816 coding downstream 18190 13727188 ~ 13740100 (-)
LOC120563649 LOC103364023,LOC104941359 coding downstream 31931 13722783 ~ 13726359 (-)
cpt1b cpt1b coding downstream 35902 13709986 ~ 13722388 (-)
prpf18 prpf18 coding downstream 64958 13686198 ~ 13693332 (-)
si:dkey-234i14.6 LOC104941367,LOC101483377,LOC102290229,LOC105938209 coding downstream 76053 13671956 ~ 13682237 (-)
arsa arsa,LOC101072550 coding upstream 20044 13781377 ~ 13785751 (-)
rabl2 rabl2b,rabl2a,LOC102798136 coding upstream 260714 14022047 ~ 14027064 (-)
odf3b NA coding upstream 266565 14027898 ~ 14030995 (-)
LOC120563866 LOC100700167,LOC108229827,LOC102796952,LOC103368207,LOC106520317 coding upstream 278096 14039429 ~ 14046318 (-)
neto2b LOC103368211,LOC104965107 coding upstream 292619 14053952 ~ 14062743 (-)
G84597 NA non-coding downstream 72821 13683824 ~ 13685469 (-)
G84592 NA non-coding downstream 113442 13644417 ~ 13644848 (-)
G84585 NA non-coding downstream 313678 13434739 ~ 13444612 (-)
G84536 NA non-coding downstream 433032 13322182 ~ 13325258 (-)
G84528 NA non-coding downstream 485761 13271252 ~ 13272529 (-)
G84719 NA non-coding upstream 311300 14072633 ~ 14072948 (-)
G84751 LOC103368197 non-coding upstream 476249 14237582 ~ 14238451 (-)
G84752 LOC101063650,LOC106561215,LOC104965117 non-coding upstream 479188 14240521 ~ 14241054 (-)
G84760 NA non-coding upstream 501370 14262703 ~ 14263115 (-)
G84761 NA non-coding upstream 502083 14263416 ~ 14263741 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other downstream 139504 13573831 ~ 13618786 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other downstream 373085 13325973 ~ 13385205 (-)
prr5a prr5,LOC103371545 other downstream 502197 13246828 ~ 13256093 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other downstream 527195 13230617 ~ 13231095 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 1613744 12141523 ~ 12144546 (-)
zgc:77752 NA other upstream 269771 14031104 ~ 14037716 (-)
LOC120564470 NA other upstream 461864 14223197 ~ 14236952 (-)
LOC120563775 cacna2d1,LOC104952157 other upstream 740563 14501896 ~ 14558228 (-)
si:ch1073-390k14.1 LOC103375950 other upstream 1200527 14961860 ~ 14967783 (-)
G85014 ppp6r2,LOC103370604 other upstream 1304706 15066039 ~ 15073350 (-)

Expression


Co-expression Network