cd9a


Basic Information

Item Value
gene id cd9a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 15310877 ~ 15317845 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808617.1
CAGGCGCGCACAGGACGGCGCGCGTATCAGCGCCGGCGCGTCTGCAAATAACCTCATTCTGCATAGCTGTTATTTAGAAGGTCTTCTATTCCACCGTGGGTTTGAGGTGATACCAGCAATAGTGAGATCTAAAGCTCAAGTACCGCCATGGCTGCACTGTCGGGAGGAGAGATGTGCATCAAATACCTGATGTTTGCCTTCAACCTGGTATTCTGGCTTGCAGGCACAGCTGTCTTTGCTATAGGCCTGTGGCTAAGATTAGACCCAAAGACCAAAGGTCTGTTTGAAGGACCAGACTCTCCATATGTGTTTTACACAGgtgtgtataTCCTGATAGGAGCTGGAGCACTGATGATGGTGGTGGGTTTCCTGGGATGTTGTGGGGCCATCCAGGAGTCCCCCTGTATGCTGGGACTGttcttctttttcctccttATCATATTTGCTATTGAGGTTGCGGCTGGAATCTGGGTATTTTCCAACCAAAGCAAGGTGGTGAATGACATCACAACATTCTACATGCAGACCTACAATAACTTCAAGACGACAGGAGATGAGCGCCTCAAAGAGACTCTGCGGGTGATTCAAACCGGGCTGAAGTGTTGCGGGCCAACTGGTAGTGTAGTAGATACTGCCAAAGACACATGTCCCCGGGGAGAGCCACTCGAGGAACTCATTACTAAGAGCTGCCCTGACGCCATTGATGAGGTGTTTGACTCCAAGCTACACATCATAGGAGGAGCGGGCATCACCGTCGGTGTTGTTATGGTGTTTGGGATGATTTTTAGCATGCTCCTGTGCTGCGCCATCAGGAAGTCTCGGGAGGTGGTGTGACACCCACCACCAAATCCTTGTTAATGTTGCATGATGTCATTCCTAGAGTCAGATGACTCTCCACTGCCAATATAAACACTGCTTGTTCAAGAGGGATAATCTAAGCTAGCCTGGGTGCAGATATTTCTGATTATTACATAACATTGGTTAGAACTGTGCTGCTGACTAGGCTCACCTTCCTGGACTAGATAGACGCGATGTGGTTATTAGGCCCAACTATAGAATATGTGTCATCTTTGCTTCAGTGGCAATGTAGTACAGAAATGTGTAATTTTGTGGTCATTTGATTGAAATTAGTGTTTGTGAACTGCTAATTATCTAAACAAAagatcatattattattatatattatagtatactGATCACATTTCTACTGATATTACTTGGGGTCACCTACCGACGAGAAGAGTCACGGATCAGGGACATAAAAATGGCACCCATCACCACTTCAGCACAATACAGCAGTAGCCAATGAATTTCTACAGTCCTTTTTCTTACAACACCGAAGTCAAACCATGGCGAATAGTAGCCAATTCAATGCCGAACTGTGAAATGCTGTGATTGAAGTTTTTTCCAGCTTGGTATTAGAGTAGCATCTCGGGTTCCTTCGTtgttacatttcatttgttCCTTCCTTTCTCCATCTCCTAACTTGCCCTTTCTAAAATCGCCTTTAATTTTTGGCACGTTTTGTAAATGTcttctatttttatttgtaacagATTTATACACTTAGGTGGTCGTACGGTACATGTGGTTTGATGATGTATTTTATaatgttcttttcattttacaGATTGGGTTGATTTATACCATATGCACTATGtttcactgagacaaaaaataatgacagccaaataaaccaaaatgtactGACTGA
>XM_039808618.1
CCCTCTGTGCTGCTACCTCCCAGTTCATAAAACCCTCTTTGCCGGCACAACCTGCAATGGAGGTCAGTTTTTCAGGTAACACAACTCTCTTGCCACTCCTTAACTGAATAATCAGGTGACTGAAGGCGTGGTAACAAAAACGCATTCTCTTTCCACCACCTTTTTCAACTGACACCATTATAATTCACTTCCTCTTGGGAAGAGGTTAGTTATTAAATACTCATAGCGGTGCATTGTGTAGACTGAATCCACATGGCTGTCGCTGGGGGAATCAAGTGTGTGAAATATCTCATGTTTGTTTTCAACTTTTTCTTCTGGCTTGCAGGCACAGCTGTCTTTGCTATAGGCCTGTGGCTAAGATTAGACCCAAAGACCAAAGGTCTGTTTGAAGGACCAGACTCTCCATATGTGTTTTACACAGgtgtgtataTCCTGATAGGAGCTGGAGCACTGATGATGGTGGTGGGTTTCCTGGGATGTTGTGGGGCCATCCAGGAGTCCCCCTGTATGCTGGGACTGttcttctttttcctccttATCATATTTGCTATTGAGGTTGCGGCTGGAATCTGGGTATTTTCCAACCAAAGCAAGGTGGTGAATGACATCACAACATTCTACATGCAGACCTACAATAACTTCAAGACGACAGGAGATGAGCGCCTCAAAGAGACTCTGCGGGTGATTCAAACCGGGCTGAAGTGTTGCGGGCCAACTGGTAGTGTAGTAGATACTGCCAAAGACACATGTCCCCGGGGAGAGCCACTCGAGGAACTCATTACTAAGAGCTGCCCTGACGCCATTGATGAGGTGTTTGACTCCAAGCTACACATCATAGGAGGAGCGGGCATCACCGTCGGTGTTGTTATGGTGTTTGGGATGATTTTTAGCATGCTCCTGTGCTGCGCCATCAGGAAGTCTCGGGAGGTGGTGTGACACCCACCACCAAATCCTTGTTAATGTTGCATGATGTCATTCCTAGAGTCAGATGACTCTCCACTGCCAATATAAACACTGCTTGTTCAAGAGGGATAATCTAAGCTAGCCTGGGTGCAGATATTTCTGATTATTACATAACATTGGTTAGAACTGTGCTGCTGACTAGGCTCACCTTCCTGGACTAGATAGACGCGATGTGGTTATTAGGCCCAACTATAGAATATGTGTCATCTTTGCTTCAGTGGCAATGTAGTACAGAAATGTGTAATTTTGTGGTCATTTGATTGAAATTAGTGTTTGTGAACTGCTAATTATCTAAACAAAagatcatattattattatatattatagtatactGATCACATTTCTACTGATATTACTTGGGGTCACCTACCGACGAGAAGAGTCACGGATCAGGGACATAAAAATGGCACCCATCACCACTTCAGCACAATACAGCAGTAGCCAATGAATTTCTACAGTCCTTTTTCTTACAACACCGAAGTCAAACCATGGCGAATAGTAGCCAATTCAATGCCGAACTGTGAAATGCTGTGATTGAAGTTTTTTCCAGCTTGGTATTAGAGTAGCATCTCGGGTTCCTTCGTtgttacatttcatttgttCCTTCCTTTCTCCATCTCCTAACTTGCCCTTTCTAAAATCGCCTTTAATTTTTGGCACGTTTTGTAAATGTcttctatttttatttgtaacagATTTATACACTTAGGTGGTCGTACGGTACATGTGGTTTGATGATGTATTTTATaatgttcttttcattttacaGATTGGGTTGATTTATACCATATGCACTATGtttcactgagacaaaaaataatgacagccaaataaaccaaaatgtactGACTGA

Function

NR:

description
CD9 antigen-like isoform X2

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K06460 CD9, TSPAN29; CD9 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808617.1 False 1714 mRNA 0.44 8 15310877 15317845
XM_039808618.1 True 1816 mRNA 0.43 8 15310877 15316386

Neighbor

gene id symbol gene type direction distance location
syt1b syt1,LOC100710649,LOC102779835,LOC103358504 coding downstream 6597 15298687 ~ 15304280 (-)
otogl otogl,LOC102779350 coding downstream 18915 15262486 ~ 15291962 (-)
ptprq ptprq,LOC107705767 coding downstream 49064 15219750 ~ 15261813 (-)
LOC120563965 ptprq coding downstream 73261 15234332 ~ 15237616 (-)
wash1 wash1,LOC102303465,LOC101485180 coding downstream 120891 15182609 ~ 15189986 (-)
pgpep1l LOC103364746 coding upstream 138962 15456807 ~ 15463714 (-)
nr2f2 nr2f2,LOC107388818,LOC100705923,LOC108230091,LOC102227842,LOC104957255,LOC106930729,LOC105023478,LOC106573769 coding upstream 484579 15802424 ~ 15811999 (-)
slco3a1 slco3a1 coding upstream 895930 16213775 ~ 16254088 (-)
LOC120563512 LOC104964038,LOC103375536,LOC102794895 coding upstream 1063098 16380943 ~ 16409443 (-)
zgc:162879 LOC104964034,LOC103368560,LOC100692867 coding upstream 1134188 16452033 ~ 16461232 (-)
G85027 NA non-coding downstream 131704 15178340 ~ 15179173 (-)
G85011 ppp6r2 non-coding downstream 247740 15062611 ~ 15063137 (-)
G85007 NA non-coding downstream 252948 15057725 ~ 15057929 (-)
G84948 NA non-coding downstream 355470 14954128 ~ 14955407 (-)
G84971 NA non-coding downstream 458854 14851720 ~ 14852023 (-)
G85084 NA non-coding upstream 43992 15361837 ~ 15363425 (-)
LOC120563611 NA non-coding upstream 135364 15453209 ~ 15455514 (-)
G85121 LOC103364747,LOC103358513 non-coding upstream 137810 15455655 ~ 15458913 (-)
LOC120563610 NA non-coding upstream 137995 15455840 ~ 15456554 (-)
G85125 NA non-coding upstream 148737 15466582 ~ 15472857 (-)
G85014 ppp6r2,LOC103370604 other downstream 237527 15066039 ~ 15073350 (-)
si:ch1073-390k14.1 LOC103375950 other downstream 343094 14961860 ~ 14967783 (-)
LOC120563775 cacna2d1,LOC104952157 other downstream 752649 14501896 ~ 14558228 (-)
LOC120564470 NA other downstream 1073925 14223197 ~ 14236952 (-)
zgc:77752 NA other downstream 1273161 14031104 ~ 14037716 (-)
ttc23 LOC104957250 other upstream 155089 15472934 ~ 15484145 (-)
G85133 mef2a,mef2aa,LOC107553916 other upstream 196933 15514778 ~ 15544082 (-)
chd2 chd2 other upstream 838139 16155984 ~ 16187336 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other upstream 871008 16188853 ~ 16209186 (-)
G85321 NA other upstream 1121529 16439374 ~ 16440965 (-)

Expression


Co-expression Network