gnb5a (gnb5,LOC103380486)


Basic Information

Item Value
gene id gnb5a
gene name gnb5,LOC103380486
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 19281117 ~ 19285297 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808751.1
CCAGCACCACCACCAggatcctcctcctcctccatctggAAACTGGAGGAGCATCTTCTCCCTCTGACGTCATGTCAGCAGCATCAGCTGTTAGCTCTGTTTTTAAGCCTTTTCGCTGCCGATCGCTGCCTGCATAAAGGAAATATATGAGATCCCCTTTAATCCCTGAAATGGCGACACAGGAGGTACAGCTGAATGAGACTCTGACCCATCTCAAAACGGAGTCGGAGACGCTGAAGTCGAAGCTGGAGGATGAGAGAGCGAAGCTGCACGATGTCGAGCtacatcaggtGGCAGAGAAGGTGGAGGGGCTTGGTCAGTTTGTCATGAAGACCCGAAGAACTCTGAAGGGACATGGCAACAAAGTTCTGTGTATGGACTGGTGTAAGGACAAGAGGAGGATCGTCAGCTCCTCACAGGATGGAAAGGTGATTGTGTGGGATGCTTTCACCACCAATAAGGAGCATGCTGTGACAATGCCTTGCACCTGGGTGATGGCCTGTGCCTACGCCCCCTCCGGCTGTGCTGTAGCTTGTGGGGGCCTGGATAATAAATGCTCAGTGTATCCTCTGTCTCTGGACAAGAATGAGAACTTGGCTGCGAAGAAGAAGTCAGTGGCCATGCACACAAACTACCTGTCAGCCTGCAGCTTCACCAACTCGGATATGCAGATCCTGACTTCCAGCGGGGATGGAACATGTGCATTATGGGATGTTGAGAGTGGGCAGCTGTTGCAGAGTTTCCATGGACATGCAGCGGATGTGCTCTGTCTGGACCTGGCTCCCTCCGAGACTGGAAACACATTTGTTTCAGGGGGCTGTGATAAGAAGGCCAATGTGTGGGACATGCGTTCAGGACAGTGTATTCAGTCCTTTGAAACTCATGAATCAGACATAAATAGtgtgcgCTACTACCCCAGTGGAGATGCATTTGCATCGGGCTCAGATGATGCTACATGCCGCCTGTATGACTTAAGGGCAGACAGAGAAGTGGCTATTTATTCCAAAGAAAGCATTATATTTGGGGTCTCCAGTGTTGATTTCTCTCTCAGTGGACGGCTATTGTTTGGCGGCTACAACGACTACACCATAAATGTTTGGGATGTTCTCAAAGGAACACGGGTCTCTATTCTGTTTGGACACGAGAACCGTGTCAGTACGCTGCGTGTTTCCCCAGATGGGACGGCCTTCTGCACAGGTTCCTGGGACCACACTCTTCGGatCTGGGCTTAAGGATGAAGGCACCGAGAATGAAATGGTACACAGACCTACTTGAAGATACACCAACATTTCTGTTTGCTAGAGAACAATCACAGAGATAAAGGCTCAGTTTTGGTTGTACATAGGTCATATCAATAGCATTGTATATACTCCAGTCTCAAGGTCATGGTAGATTTACATATTTCAGAGAGTAATTAAACCAAATGATATGCGCTTGTATTACAATACGATTAAAGGAAAATGGTATGGAGGTACTTATGGTTACAACTTAAGATGTTAAATGTATATTGCAGAAAATAACATTGGTAGTGACTAGATCAGTCTAAGGTAGAAGTGACACAATAAAGTGATGTATTGTATGTGCCCACATAAAGGACATTACttgta

Function

symbol description
gnb5 Enables G-protein gamma-subunit binding activity and chaperone binding activity. Contributes to GTPase activator activity. Involved in dopamine receptor signaling pathway; negative regulation of voltage-gated calcium channel activity; and positive regulation of GTPase activity. Located in cytosol.

NR:

description
PREDICTED: guanine nucleotide-binding protein subunit beta-5-like

GO: NA

KEGG:

id description
K04539 GNB5; guanine nucleotide-binding protein subunit beta-5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808751.1 True 1607 mRNA 0.47 11 19281117 19285297

Neighbor

gene id symbol gene type direction distance location
ap4e1 ap4e1 coding downstream 919 19269748 ~ 19280198 (-)
LOC120564055 NA coding downstream 16753 19249998 ~ 19264364 (-)
clpxb clpx coding downstream 33737 19233210 ~ 19247380 (-)
LOC120564071 NA coding downstream 48405 19230226 ~ 19232712 (-)
tmem276a LOC104964516,LOC104932831,LOC103363105,LOC103156503,LOC100692521,LOC103466466 coding downstream 64812 19213383 ~ 19216305 (-)
myo5c myo5c coding upstream 175 19285472 ~ 19296087 (-)
LOC120564048 LOC103363116,LOC100694407,LOC102201394 coding upstream 11696 19296993 ~ 19313663 (-)
rsl24d1 rsl24d1 coding upstream 33590 19318887 ~ 19322671 (-)
LOC120564050 LOC104931415,LOC103363123,LOC104960120 coding upstream 38502 19323799 ~ 19339115 (-)
LOC120564015 rfx7,LOC100694937 coding upstream 56313 19341610 ~ 19358244 (-)
G86337 pfcyp19b-tstr non-coding downstream 12680 19268211 ~ 19268437 (-)
G86253 NA non-coding downstream 148951 19131851 ~ 19132166 (-)
G86195 tph1 non-coding downstream 269036 19010925 ~ 19012081 (-)
G86072 NA non-coding downstream 511979 18767495 ~ 18769138 (-)
G86064 NA non-coding downstream 520041 18757052 ~ 18761076 (-)
G86394 NA non-coding upstream 83462 19368759 ~ 19369056 (-)
G86395 NA non-coding upstream 85710 19371007 ~ 19374939 (-)
G86400 LOC101161482 non-coding upstream 98322 19383619 ~ 19384007 (-)
G86430 NA non-coding upstream 240390 19525687 ~ 19527137 (-)
G86432 NA non-coding upstream 245279 19530576 ~ 19531622 (-)
LOC120564082 svip other downstream 120630 19156758 ~ 19160487 (-)
G86194 tph1 other downstream 270201 19007196 ~ 19010916 (-)
syt7a LOC102215913,LOC101470916,LOC102782335,LOC103466506,LOC103141308,LOC107388681,LOC100690092 other downstream 585019 18614588 ~ 18696098 (-)
tmem258 NA other downstream 778251 18499319 ~ 18502866 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other downstream 1233277 18041628 ~ 18047840 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other upstream 30088 19315385 ~ 19317478 (-)
G86402 LOC103363837 other upstream 102525 19387822 ~ 19388575 (-)
cep152 cep152,LOC104960117 other upstream 272155 19557452 ~ 19573688 (-)
G86638 NA other upstream 967342 20252639 ~ 20259259 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 1521585 20806882 ~ 20829235 (-)

Expression


Co-expression Network