fancf


Basic Information

Item Value
gene id fancf
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 19136971 ~ 19139165 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808752.1
AAATTGGCCAAAATTTAGCACTCAAGAACGCATGCGCAGTGGTAACAGCGGCAGGCGGaccagagaaaagaaaacaagacaaTGAGCGGCCACCACCGGCGCTCAGAGGCTGAACTGTGAACGCAGAGAGCGCCACATGGAGGCGGTGCTGAAAAACTTGACGAGCACGGCGGAGCTTCTGGCCGTGGCGGCGCAGAGCGGTGTGGTGGAGCAGTGGGATAAACAAACTCTGTCCAGAGCTTTTCACTGGGCACGGTACTGCGAACACCTCTTTTCCAGGTTTCACAATAACCCTGTCATAAGGAAGACTATGGAGAAGCAGCTGCAGCTCACAAATCAAAGTTTGCGAGCTGTTTTCCCTGAATACACAGAAGTCTCTTTCTCGGACATCTCCCGGTGTCAGCACTTGTTGCTTGTTGGGCTGTTGAAAAATCCTGAGCTGCCCATCTCCATCATGAAGATACTCTTTGACACTACCAAGCAGAGTGAGTATCAGGATGTTTCTGGCTTCTGCAGCCACATTATTCAATGCAAATCTGCTTGTAAAGTCCTAAGTCCTCTCACAGACTTGTCAGCTATTGGTGCTGATGCTGAGGTGCAGGGGGTGATGCTGATGGAGAGGTTGGGTGCTCTGCTGAGCCAAGGCACTGAAGCCTGCCAGACAGAGCATATTGTAGACTCTGTCCTCCAGGGATGTGAAGGAGCAGCAGGACATTTCTGTCTGATCATCGCGGCGGCTCTGCTGACAACGAAAAACTCTGCTGCACAAACTGCTTCACAGGATTTTCTTTTGGACTGGCTGCAGAAAGAGCACAATGTTCTGCAGCACATGTGTTCTGCATTGCCTACTACACTTATTAAAGACCTGGCCAAAGAACACCTGAAATTTAGAGATGCATACTGCGATGTGCTGAAAAAGTGGGCCTCTGATATGGAATACAGCATAAGTGAGGGTGAATGGGCTCAAACTAGCACAAACCAAACTGTGTCCTTCCAGAGACTGACTGAGCACTTTCTGGCCATGTTTGAGGCCTGTCCCTCTCTGAGGGAGGATGTAGAAAAAGAGCTAAATGCTTTGAAAGTTTCTGATGGGGACTTTGATGTCAGAGGTCTGAGTGTGTGGGGAGACCTCCTGTCAGCATTAAACAAGTGACTGTCAGTCATGTGCTTTCTTTGGAGATGGAAGAAATGCTGAAATGTAGCCGATTGTAATGCAATATATAAACAAATGTAGTCTGTTTTATATCTATATGCAATGCTTTACCGGGGGTAGGTATTAAACCTCAAAACTTTTTCATACCAAACAAAATTTGACGATATCACAAATTATTGGAAGCTGTCAATGACTAAAAGCTGGCATCAGATGCTCGCTCAGATTCACATTTACTTCTAATCAGACAGTTTCAGTTCAGTTTCcaattttgtttatattttgatTAGGCAAAATTGTTGTGTGAAATGAAAAGTACTGTCGGTACCAAAACTCAGGAATCATAAGTATTTGTATCGCAAAAACTGTCTTTTCAGTGCAAAGTACACATAAAAAGCACACAACTCTTAAATATTAGCCAGTCGTtcagagagttttttttcttttgttatttaaatTATTGACTCTTTATGTTGCATTTGTTTCAACTTGTGAAATATAATGAGAATCAAAAGCAGAACATACTGGATACATTTACAGGATGGAAATATGATTAAAAAATGTGTGTCAATATTCTAAAATGCTCACTTTAGTGGATCTGGAAGCCTTAAAATACATTGCACTACCCTGTCTCTTTCACAGTATAgcttaaatattttttgtattccATGTACTTTGTAATAATGGAAttaatagataaaaaaaatctcaataCAA

Function

NR:

description
PREDICTED: Fanconi anemia group F protein

GO: NA

KEGG:

id description
K10893 FANCF; fanconi anemia group F protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808752.1 True 1867 mRNA 0.43 2 19136971 19139165

Neighbor

gene id symbol gene type direction distance location
LOC120564059 ano9 coding downstream 43591 19082128 ~ 19093380 (-)
sigirr LOC107101974 coding downstream 56086 19069872 ~ 19080885 (-)
kcnc1b kcnc1 coding downstream 99808 19023692 ~ 19037163 (-)
LOC120563796 LOC104965208 coding downstream 155189 18967291 ~ 18981782 (-)
LOC120564058 LOC104965497 coding downstream 174153 18957869 ~ 18962818 (-)
tmem276a LOC104964516,LOC104932831,LOC103363105,LOC103156503,LOC100692521,LOC103466466 coding upstream 74218 19213383 ~ 19216305 (-)
LOC120564071 NA coding upstream 91061 19230226 ~ 19232712 (-)
clpxb clpx coding upstream 94045 19233210 ~ 19247380 (-)
LOC120564055 NA coding upstream 110833 19249998 ~ 19264364 (-)
ap4e1 ap4e1 coding upstream 130583 19269748 ~ 19280198 (-)
G86253 NA non-coding downstream 4805 19131851 ~ 19132166 (-)
G86195 tph1 non-coding downstream 124890 19010925 ~ 19012081 (-)
G86072 NA non-coding downstream 367833 18767495 ~ 18769138 (-)
G86064 NA non-coding downstream 375895 18757052 ~ 18761076 (-)
LOC120564122 NA non-coding downstream 458986 18675263 ~ 18677985 (-)
G86337 pfcyp19b-tstr non-coding upstream 129046 19268211 ~ 19268437 (-)
G86394 NA non-coding upstream 229594 19368759 ~ 19369056 (-)
G86395 NA non-coding upstream 231842 19371007 ~ 19374939 (-)
G86400 LOC101161482 non-coding upstream 244454 19383619 ~ 19384007 (-)
G86430 NA non-coding upstream 386522 19525687 ~ 19527137 (-)
G86194 tph1 other downstream 126055 19007196 ~ 19010916 (-)
syt7a LOC102215913,LOC101470916,LOC102782335,LOC103466506,LOC103141308,LOC107388681,LOC100690092 other downstream 440873 18614588 ~ 18696098 (-)
tmem258 NA other downstream 634105 18499319 ~ 18502866 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other downstream 1089131 18041628 ~ 18047840 (-)
G85813 rpl4 other downstream 1100695 18031008 ~ 18036276 (-)
LOC120564082 svip other upstream 17593 19156758 ~ 19160487 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other upstream 176220 19315385 ~ 19317478 (-)
G86402 LOC103363837 other upstream 248657 19387822 ~ 19388575 (-)
cep152 cep152,LOC104960117 other upstream 418287 19557452 ~ 19573688 (-)
G86638 NA other upstream 1113474 20252639 ~ 20259259 (-)

Expression


Co-expression Network