tmem276a (LOC104964516,LOC104932831,LOC103363105,LOC103156503,LOC100692521,LOC103466466)


Basic Information

Item Value
gene id tmem276a
gene name LOC104964516,LOC104932831,LOC103363105,LOC103156503,LOC100692521,LOC103466466
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 19213383 ~ 19216305 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808755.1
ATGGCTGCTATGAGGACTTTAACCGCGGCAGGTCTCTTTTTGGCATTTTGCGCTTTGGGACTGATAGCAGTAGCGATCAGCACTGACAACTGGTACGAGACTGACGCCAGGAGGCACCGGGAACGCTGCAAGAATTATTCAAACAAAAGAAACGACCCCGGCTACATTTACATCTCCAACAACAACCTTCCACTTCGCATGTTGCCAAAGGAGAGAAATGTGGAGAGGAGGAGCGACGAAATGCTGTTTCGGTCTAAGCGGCACTTCTTGCCTCCTGCCCCGGCAATGGAGTCCCTTTGCAGTCGGCAATTCAACTCCACCATCACCGGACTGTGGAAAAAGTGCCACCGTGGGGGATTTGACTTGGAGATAGAGGATTTGATCTTTAAAGGATTGGTTCCGCGCTGCACACCAATTAAATACTACTACTCATCATCAGCGCTGCCCAGAAATCTGCCAATCAATCTGACAAAGACAATAAGGCAGGACGAGTGGCACGCGCTCCACCTCCAGAGGATGACTGCCAGTTTTGTAGGCATGGCCATATCCATCATCCTGTTCGGTTGGATCATAGGCGTGCTGGGCTGCTGCAAGGAGCATGATCTAATGCAGTATGTGGCTGGACTTCTCTTCCTCATGGGAGGGACATGCTGCATTATCTCCCTCTGCACATGTGTGGCTGGGATCAACTTTGAACTGTCTCGCTATCCTCGCTACATGTTTGGAATACCAGAGGACATCAGTCACGGTTATGGCTGGTCCATGTTTTGTGCTTGGGGTGGACTGGGCCTGACGTTGCTGGCTGGCTTCCTGTGTACACTCGCTCCTTCCCTCTACCCTCCACACACACCAGTGGTGCACAAGCCCAGGCAGGAGAACGGCTGTGTGTGACAGGCAGCCGCACATCTAACAGACACCTGTCTCATCCTGAAACAGTGACGAGCCCTGCTGCACAGACAGTTACTGTATACCCAGGGACTCAGAGCAGAGAGAGCCTTCAAACAGCTTGGCACAGAGAAAGCACAGGACACTGGCTCTCGCTCACATGAAGATGAAAAAGAGGTGACATTTGGCATAGATGATTTCAGTTCCTCTGGTGCTTTTGGTTCCGTCCCTCTTCATGAATGAACTGTTCAGTGTTAATTGCTTGCTCTTCAAGAGGAAAAATAGTTATACAaatttttttcctgtaaaaccTGCTAGTTtaaggagaaaaaagagaaaaagaaacactgGCAGACGATCAACAGCACAACTTTTAAATCTGTATTTACGATCAAACTATGGATGTGAACCGTCACATTTCAAAGGGCAACTGTGTGTCATTATGTACCCATTCAAAACAAGATATGTACATGTACTTTTTGAATTGTATGCGGATGCATTTGTGTTTATTCAAGAAAAAATATGAGCATTAAGACCATACTATGTTTGAGGGAAATGTTTTGTTGTTCTTAAGGTCTTACCCCCatcaaaatatttttgaaaaataaaacagcctTGCAAAACTATTATTTCTTCCCATgtaacacaccgaacagacctCATATAAACTTCTTTGTGGTCGTCTTTTCTCTTGCATTATGACATGAGTCCACTGGTATGTCAGCAGACACAGAGGTCTGCTAATGGGGTCAAAACTTCAACAGCATGATTTTTAAACAGCAGCTGTTTTATTTCTGTTAGTGATACAAGGAGTCTGTTTTATTCAACCACTTCTGAACACTTTAATGTGCAAATGTCAGCGAGTCAGTGACCAAAACATAGCAACAGAActgatgaaaaacaaacaattgaACAATAAAATAGAACAGAAAAAGTGAAGTAATTGTCTGTTGTGCATTACAGTGAAAGAAAAGCTCATTTAATGAACATTAATTATGAAGTAAGAAATTGTTGTAAATCCAGACTACAACATTAACTCTGACAAATTTGTATTATGATTGAATacgtttttttcttccattgaCAACATGCATTCCAGGGACTGTTagctttaattacttttccACATTTATTAGAAACTAAATCTTTCTCACCTCTAATATCATCACTCATTTTCTTTGGTTTCTCTGCTATTTAGCATCTCCTCTTTACTTGTGTTACTCAGATTATATGTATTATCTTCATGGAGTTATTATGTGCAGCTGCAACTTTGAATGAAACCCCAGTTGTTGGTTAAAACCATGTTGGCCACTGGAGACTTGTAAGTAAATAATTATACAATCATGATAGAATAAATGATGTGCTGTATATCATAAATGCGGAGAATTATCTGCATGTTGTGACAAGC

Function

NR:

description
PREDICTED: transmembrane protein 178B-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808755.1 True 2293 mRNA 0.42 4 19213383 19216305

Neighbor

gene id symbol gene type direction distance location
fancf NA coding downstream 74218 19136971 ~ 19139165 (-)
LOC120564059 ano9 coding downstream 120003 19082128 ~ 19093380 (-)
sigirr LOC107101974 coding downstream 132498 19069872 ~ 19080885 (-)
kcnc1b kcnc1 coding downstream 176220 19023692 ~ 19037163 (-)
LOC120563796 LOC104965208 coding downstream 231601 18967291 ~ 18981782 (-)
LOC120564071 NA coding upstream 13921 19230226 ~ 19232712 (-)
clpxb clpx coding upstream 16905 19233210 ~ 19247380 (-)
LOC120564055 NA coding upstream 33693 19249998 ~ 19264364 (-)
ap4e1 ap4e1 coding upstream 53443 19269748 ~ 19280198 (-)
gnb5a gnb5,LOC103380486 coding upstream 64812 19281117 ~ 19285297 (-)
G86253 NA non-coding downstream 81217 19131851 ~ 19132166 (-)
G86195 tph1 non-coding downstream 201302 19010925 ~ 19012081 (-)
G86072 NA non-coding downstream 444245 18767495 ~ 18769138 (-)
G86064 NA non-coding downstream 452307 18757052 ~ 18761076 (-)
LOC120564122 NA non-coding downstream 535398 18675263 ~ 18677985 (-)
G86337 pfcyp19b-tstr non-coding upstream 51906 19268211 ~ 19268437 (-)
G86394 NA non-coding upstream 152454 19368759 ~ 19369056 (-)
G86395 NA non-coding upstream 154702 19371007 ~ 19374939 (-)
G86400 LOC101161482 non-coding upstream 167314 19383619 ~ 19384007 (-)
G86430 NA non-coding upstream 309382 19525687 ~ 19527137 (-)
LOC120564082 svip other downstream 52896 19156758 ~ 19160487 (-)
G86194 tph1 other downstream 202467 19007196 ~ 19010916 (-)
syt7a LOC102215913,LOC101470916,LOC102782335,LOC103466506,LOC103141308,LOC107388681,LOC100690092 other downstream 517285 18614588 ~ 18696098 (-)
tmem258 NA other downstream 710517 18499319 ~ 18502866 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other downstream 1165543 18041628 ~ 18047840 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other upstream 99080 19315385 ~ 19317478 (-)
G86402 LOC103363837 other upstream 171517 19387822 ~ 19388575 (-)
cep152 cep152,LOC104960117 other upstream 341147 19557452 ~ 19573688 (-)
G86638 NA other upstream 1036334 20252639 ~ 20259259 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 1590577 20806882 ~ 20829235 (-)

Expression


Co-expression Network