LOC120564089


Basic Information

Item Value
gene id LOC120564089
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 12252584 ~ 12258264 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808778.1
CGTCATTTTGTCTTTGAGTTTCCTCCCCGCAGAACCCAGCAGTCGCAGTCAACTCAGAGACGTCCACCATGCAGATCCGCGCAAAACAAACTTTCTTCCTTCTAACGTCTGTGTTATTTCTGGTTGTTGCTGCAGCAGACCTACTTGCTCCTGAAGTCCACACAAAGCTGGGCAGCCTGAGCGGTCAGTATGTGAGTGTAAAGGGGAAGGAGCCTGGGGTCCATGCCTACCTGGGTGTACCGTTTGCCAAGCCACCCATAGGCCCCGCTCTGAGACTGGCTGCACCCCAGCCTGTAGAGGGATGGGAAGGAGTGAGAGATGCCACCCAGCAGCCATCCATgtGTGTTCAACATAAACAGTTCTCTTTAGATCTGTTTGATAAACTTGGTCTCATGTTGGTAGATCTCCCAGACATTTCAGAGGACTGCCTTTACCTCAACATTTACACTCCTGCAAACAGAGCTCACGATGCCAAGCTCCCAGTCATGGTCTGGATCCATGGTGGAGGGTTTTCTATGGGGGCAGCTTCAATGTATGATGGCTCCGCCCTGGCTGCTTACCAGGATATGGTTGTGGTTCTGATCCAGTACCGCTTGGGACTTCTGGGCTTTctcagCACTGGAGATGAGCACATGCCAGGGAACGTTGGCCTGTTGGACCAGGTACAAGCTCTGAGGTGGATTCAGCAGCACATTCACAACTTTGGAGGGGACCCAGATTTAGTTACCATATTTGGGGAGTCTGCTGGCGGAGTGAGCGTATCCCTCCTGCTTCTCTCGCCATTGTCTGTTGGCCTGTTCCACCACGCTATTGCTGAGAGTGGCACTGCTGCGATGGATATACTCATTTCAAAGGATCCTCTATCAGTGATGCAGGTGGTGGCAAATGTATCTGGCTGTAGCCTCGAAAGCACAGAGAAGATGGCAGATTGCATGAGAAATCTCAATATTAACACTATTGTGGCTATTGCGCAGGATGAACGATTGAGAATTTCTGTAAATATTGATGGACACTTCCTGAGAAAACCTGTGGATGAGCTGTTCCATACACGTGAACTTCTAGTGGTACCATTTATGACTGGTGTTAATAATGATGAAGGGGGCTGGTTACTTAACAATTTCTTTGCTCCTGCAAACTGGACAGAGGGATTAGACCGGGAGCAGCTGTTGAACATGCTGTCCCTGTTCTACCCTGATCCCAAAGATGCATTCTTCAGAGATTTGTTTGTAGATGAATATATTGGAACCGGTGAAGATCGAGAGAAAAATAGAGATGTGTTCACTGACTTGCTTGGAGATATGTTGTTCACCATCCCAGCCATCAAAACCGCTAATGCCCACCGAGATGCAGGTGCCCCTGTATACCTGTACGAGTACCAGCATCCACCCAAATTCCTGCAGGCAAAAAGGCCAAGCTTTGTTGGGAGTGACCATGGCGATGAAATTTTTACAGTATTAGGATTTTGCTTCACAACTACCCATATCAAATTAGCCGAATCATGCGATGAAGACGAGGAAGAGTTGAGCAGAACCATGATGAACTACTGGGGGAACTTTGCTCGCACAGGGTCTCCTAATGGAGGCGGCCTTGTCCACTGGCCAAAGTATGGAGCAGAAGAAGACTACTTGTTAATTGATGTAAAGGAGCAGGTAACTGGTCAGCACCTGAAGAAGGAGCGCTTCGTCTTCATGACCCAGACTCTCCCGGAGAAGATCCGACAACACAAAGAGAAAACGGAGCGCAGCGAACTGTAGAACATACACCTCTTCTTTCTCCCTTCCatcattttctttccttttattgaTTCCATCTTTAACCAGAAATAAGTCTGTTGACAATGCATAAGACATATTGAGACATTTGTTAAACTAATGTGATGGTAATAATATTTTAACAAAGTTCTTGTGTAGCCTATACAAATGAATTGTATGAAATTTGAAAAGGAAATTTTCTAAGCTCACAATTGAACTTAAAAAGCTGTGTGATGTTGTAGTAGCATGTGAAAAATTAAGGTTGGGTGAATAATTTTTATAGCCACTGTGTATATTGAACATCAGTTTGAATCCAAGGTAAATAGCTTCAGGGAATACCTCTTTAAAATCCAAAAGCCCAACAGGAAATATGTAACAGAACAGCACCGCAAGTCTTGGATGCCCCTACCGTGTCTGACCACATATTTAATATCTCCTTCATAATCTGGATtccaatataaaataaaaatctaaatgttttaCCATTCA

Function

GO: NA

KEGG:

id description
K03929 pnbA; para-nitrobenzyl esterase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808778.1 True 2240 mRNA 0.45 13 12252584 12258264

Neighbor

gene id symbol gene type direction distance location
cspg4 cspg4 coding downstream 910215 11265168 ~ 11342369 (-)
snupn snupn coding downstream 1037091 11205454 ~ 11215493 (-)
sin3aa sin3a coding downstream 1082661 11146670 ~ 11169923 (-)
wdr61 wdr61 coding downstream 1142276 11101049 ~ 11110308 (-)
ireb2 ireb2 coding downstream 1171279 11062695 ~ 11081305 (-)
kras kras,LOC105900436,LOC103038241,LOC107595236 coding upstream 295219 12553483 ~ 12563371 (-)
bhlhe41 bhlhe41,LOC102793158 coding upstream 327047 12585311 ~ 12587491 (-)
itpr2 itpr2 coding upstream 342117 12600381 ~ 12660168 (-)
eea1 eea1 coding upstream 431429 12689693 ~ 12712352 (-)
nudt4a nudt4,LOC100689726,LOC101064765,LOC102791978 coding upstream 454189 12712453 ~ 12727343 (-)
G84130 NA non-coding downstream 47053 12205241 ~ 12205531 (-)
G84129 LOC104959604 non-coding downstream 51749 12177943 ~ 12200835 (-)
G84127 NA non-coding downstream 82389 12169668 ~ 12170195 (-)
G84118 NA non-coding downstream 82937 12160379 ~ 12169647 (-)
G84115 NA non-coding downstream 89564 12157250 ~ 12163020 (-)
G84236 NA non-coding upstream 322339 12580603 ~ 12613276 (-)
G84244 NA non-coding upstream 428770 12687034 ~ 12687287 (-)
G84243 NA non-coding upstream 429219 12687483 ~ 12688635 (-)
G84294 NA non-coding upstream 572092 12830356 ~ 12834571 (-)
G84320 rfx4 non-coding upstream 627399 12885663 ~ 12885917 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 108038 12141523 ~ 12144546 (-)
G84083 NA other downstream 364186 11888027 ~ 11888398 (-)
ptpn9a ptpn9 other downstream 991623 11173553 ~ 11260961 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other downstream 1339367 10823286 ~ 10913217 (-)
LOC120564603 NA other downstream 1537739 10706219 ~ 10714845 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other upstream 972353 13230617 ~ 13231095 (-)
prr5a prr5,LOC103371545 other upstream 988564 13246828 ~ 13256093 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other upstream 1067709 13325973 ~ 13385205 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other upstream 1315567 13573831 ~ 13618786 (-)
zgc:77752 NA other upstream 1772840 14031104 ~ 14037716 (-)

Expression


Co-expression Network