LOC120564144 (LOC103374492)


Basic Information

Item Value
gene id LOC120564144
gene name LOC103374492
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 12965964 ~ 12974409 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808886.1
TGTGacgctgcagtcagcagcagGTGTGGACGTGCAgtgttatttctttattttggttTGCTTGCTGCAGCTCGCAGGCTCATGCCACTCCGTGTGGTTAAACTGAAGCGGAttcaggtccaggtccaggtccgGGTGTAAACCCTGTCTGTGTGGTTCACTGTCGAGATGTCGTCGGCCCAACATGACGGAACCTTGAGTCAGCTCAATACGTTTGAGAAACTGTCGTGGAGGCCCTCCATCCGCGAATCAGGCTCCAAGAAGCGGGCACGGTGGCTTCAGGCTCGGCGCATCTTCTCCCCTTCCTGCCCCAACCTGCGGATCCCCAACAGGTTTCTGAGAGAAGGACACTGTGTACCCCCTGCTCGGAGCGGACACCGGTGTGTTGCAGACAGCTCCAACCTGTATGTGTTTGGAGGCTACAACCCAGACTTTGAGGAGGCAGGCGGGTCAGAGAATGAAGACTACCCTCTTTTCAGGGAGCTTTGGCGGTTTCATTTTGCCACAGCCACCTGGCAGCAGGTCCGCACAGAGGGTTACATGCCCACAGAGCTGGCCTCTATGTCAGctgtttTACACGGCAACAACCTGCTTGTATTTGGTGGCACTGGGATTCCATTTGGTGAGAACAACGGCAATGACGTCCATGTTTGCAATGTACAGTACAAACGATGGAACCTGCTCAACTGCAGAGGGAAGAAACCCAACAAGATCTACGGACAGGCGATGGTCATCATAAATGGCTACCTCTATGTGTTTGGCGGGACAACGGGCTACCTTTACAGCACCGATCTGCACCGGCTGGACCTGACCACCAGAGAGTGGACCCACCTCAAACCCAACAACGCACCATCAGACCTACCTGAGGAGAGGTACAGACACGAACTAGCTCATGATGGACAGAGAATATACATTTTAGGAGGTGGGACGTCCTGGACCTCATATACCCTGGAAAAGATTCACGCATATAACTTGGAGACAAATTACTGGGAGGAAATGGTCACCAAACCCCATGAAAAAATAGGATATCCTGCTGCCCGCCGTTGTCACAGCTGTGTGCAGGTCAAAGATGAGGTGTTTATATGTGGGGGTTATAATGGAGAGCTGATCCTATCCGACCTGTGGAAGATCAACCTGCAGACTTTTCAGTGGACCAAGCTGCCTGCCGCCATGCCAGAACCAGCATACTTTCACTCTGCTGCCGTCACTCCAGCTGGCTGCATGTACGTCCACGGCGGCGTCGTCAACATGTCTGGGAACAAAAGGACTGGCTCTTTGTACAAAGTGTGGTTGGTGGTGCCCAGCCTGCTGGAACTGACCTGGGAGAAACTGCTGAAAACTTTCCCTCACTTAGCCCAGCTGTCCACCCTTCAGCTGCTCAGCATGGGACTGACACACGCACTAATTCAGCGGCTCAAATAGACGGAGCACAGAGACTGAAGGACGTGCTATGTGATGGAACGGCACTGCCTCTAAAATATAACTGATGACTCGGCAAAAAAGTTcttgaaaaggaaaaaagtctGATGTCAgatgattatttaaaaaaactttgaatgccttttaactttagttttatgtaaatgtaggtgcttttttttttttttttaaatgcaaagtgCAATGTTTTATGTTTCTCTGTATGTGAATGTATCAGATTTGAGTTTGCATGCATCCATCAGAAGCCATGCATCAGCATGGACACCAGAATCACTGTTTCTTGTGCTTTTGTACTCAAAAGTTTTGGGTCCATTATGTCATGCATTTcccagttgttgttttttcacacATCACTGTCACAGAAACTTGTAGAGCAGGAATAGTTCAATGTTCCAAAGATCACTTATTGAAAGGCAAAATGAATGTTGCTTCTGCGAATGTCATTTTAGATTCAATTCAGAGATCAGTTTGTTTCACTGTAGCTGAAATTCTCCGCACACTGTTTGCAATCTTTGCCACATGTTCAGTCCCCACTGTGACATAGGTTAGATCAGAAATGACTGCCCCAACCCATGGTGATATAAACTTAAATGTCCATTTAGTTAGTTAGAAATCAGCCAGATGATCTGAAAAGACACTGCTGATAAATCATGGACACGTGAAACTGGGATACCTAAAAGACTAATTAGGTTAATTATTTAAGGCGTCATGTTTTAGCCTCAAGGGCTTTCTGttcaaatttgaaaatgttCCCCTCACTGGAACACATTAGGCCTTATGATCAGATGAAAACACAAAAGCCTTTTTAAAACCGCTGCGACATGGCATCACTGTGAAACTTCTAGTGCCTCTTTGGTTattcttcctttttgttttaggAAAAATTAAGCTTAATAAGTTAGAAATGATTTTATTAAACTGCAGCTCCACAGTGATTCTCAAGCCTTTTTCATTTCTACATTCGGTGCCTTCTGAATTTCCAATATGTCCCACACATTGTTTTTACATCTCTGTAGAagattttgatttgtttattacTCTCTGAGCTGTGCACATGCAGCCTTTTTCCCCATTGCTTTACCGGGTGTTCTCCACATGAGCCTTTTGTTGCTAAAATAATCAGGAGATGCCACTTGCAGCTAAAGATTTTTCTTTGTGCTGCTGTTTGATTTTATGacaaaactttctttttttttaattatagcaAAATGTGCAGCTACATTCTTTTACACTTAAATGGTCATTTCAGTTCCCAATGTATGCCTAAACTTCATTTTAACCTTTTATACTGCataaggctgttttttttttaactttagtcTCGTTTTTCCAGAGAACTTTGTGCTAGGGTACTTTGAAAAATAAGTGGCAggggacttttttttaactagtATTAACTAGTAACAAGGTATTTAAGGTGTACTCAGGATGTGAAATACTGTGTTCAGACTCCGTCTGTAGAGCATCACCATCGCCAAAATGTCAACTGGCTGTCATTTTTGGGACAGAAATATGTACAAGATGACTCATGAAAACTAATCTTTCGTGGCTACTGTGGACTGTAACTCTTAAATACTTTAACATTTCAGCTGCTTGTATTAAGTCACACTTTTGCCTCTTTCTTTCACCTATTTTGTCAAACTCTACCTTAAATACTTTATCTCATGTTCACTTTAATTGTTGGTACAATACTAAGCTAACTCATCTAAAACATTGTCTCATAAtgctcattttcacattcaaaaCTCCACctcatttacattttgtttgacATGTTGCAGCGTTATTTATATCCTATTATGAAGCAACAGCTTCACTTTGTGCTTGGACTTGGTAAATGTACTGCCTTGGTTAAGATTGAGATGTTTATATTTGCATAACTTTTTTATGTTAATGAAAGTTAAATTATCTCTTTTGCATGTCAGTATGGTGTGCATGTCACTTTACATAAACTCTCAGGAGAAAAGGTGAATGTCTCCTCAAAAGCAAATATGGCTGTAATGTACATTATGTTTTGTAATTCCTGTCCGtgcaaacaataaaaacacaggcagcca

Function

NR:

description
PREDICTED: kelch domain-containing protein 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808886.1 True 3497 mRNA 0.43 10 12965964 12974409

Neighbor

gene id symbol gene type direction distance location
LOC120564143 NA coding downstream 21728 12940996 ~ 12944236 (-)
si:dkey-103i16.6 LOC103374744,LOC101471570 coding downstream 34752 12914638 ~ 12931212 (-)
slc17a8 slc17a8 coding downstream 191709 12760632 ~ 12774255 (-)
nr1h4 nr1h4 coding downstream 207173 12742142 ~ 12758791 (-)
ube2na ube2n coding downstream 229283 12730355 ~ 12736681 (-)
LOC120563354 LOC104941983,LOC103374494 coding upstream 27711 13002120 ~ 13014975 (-)
LOC120564327 LOC104941984,LOC100534567,LOC102302869 coding upstream 42156 13016565 ~ 13026368 (-)
LOC120563727 LOC104940840,LOC103375251,LOC104940445 coding upstream 173438 13147847 ~ 13152704 (-)
kxd1 kxd1 coding upstream 181002 13155411 ~ 13158096 (-)
sinhcaf fam60a,LOC107388928,LOC103376222,LOC104940447 coding upstream 184904 13159313 ~ 13166108 (-)
G84370 NA non-coding downstream 17041 12948661 ~ 12948923 (-)
G84369 NA non-coding downstream 17355 12948274 ~ 12948609 (-)
G84350 NA non-coding downstream 26547 12938044 ~ 12939417 (-)
G84338 NA non-coding downstream 56018 12908967 ~ 12909946 (-)
G84326 rfx4 non-coding downstream 67407 12897059 ~ 12898557 (-)
G84378 NA non-coding upstream 3553 12977962 ~ 13046029 (-)
G84384 NA non-coding upstream 16618 12991027 ~ 13040446 (-)
G84446 NA non-coding upstream 218860 13193269 ~ 13193706 (-)
LOC120563976 NA non-coding upstream 226534 13200943 ~ 13201663 (-)
G84532 NA non-coding upstream 260764 13235173 ~ 13235410 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 821418 12141523 ~ 12144546 (-)
G84083 NA other downstream 1077566 11888027 ~ 11888398 (-)
ptpn9a ptpn9 other downstream 1705003 11173553 ~ 11260961 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other downstream 2052747 10823286 ~ 10913217 (-)
LOC120564603 NA other downstream 2251119 10706219 ~ 10714845 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other upstream 256208 13230617 ~ 13231095 (-)
prr5a prr5,LOC103371545 other upstream 272419 13246828 ~ 13256093 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other upstream 351564 13325973 ~ 13385205 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other upstream 599422 13573831 ~ 13618786 (-)
zgc:77752 NA other upstream 1056695 14031104 ~ 14037716 (-)

Expression


Co-expression Network