cd82b (LOC103355222)


Basic Information

Item Value
gene id cd82b
gene name LOC103355222
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 19987783 ~ 20012310 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808992.1
cacacacacacacacacacacacacattcacacacacacattcacaagtCTTACTTCTCACCCGTTAACGTTAGACTTTAGTCACCCAGCTAGCACGGCAGAAGACGGTCGACCCTCAGCCAACTGTTGCCACCTTTTGGAGAAGAAATCAAAAAGCACAGCCATGGGGAAAGGATGCATTACAGTCACCAAGTACTTTCTATTCCTTTTCAACCTCCTCTTCTTTATCTTCGGAGCAGTGATCATGGGCTTTGGCCTGTGGGTCCTCTTTGATAACCAGAGCTTCATTGCTGTTCTACAGGAATCCTCAGACACGGTGAAAGTGGCTGCCTACATCCTCATCGGAGTGGGTTCCTTGTCAATGGCCATGGGCTTCTTTGGCTGCATAGGAGCCATCTACGAAATTCGTTGTCTGCTGGGTCTGTACTTCACCTGCCTCCTGCTCATCCTCATCGCCCAGGTCACTGCTGGAGTTCTCATCTACTTCCAAAGAGATCGGTTGAAATATGAGATGTCCAACATCATTAAAGGCATGCTAATCAACTACACTGGTCAGAACAGCACCACAGAGCACACCTGGGACTACATTCAGAGGACGATGAAGTGCTGTGGATGGACGGGTCGAGGCAACTGGTCTGAGAACATTTTGATCAAGAACAGCTCTCAGAACCTCTACTCCTGTTCCTGTCGCAATGAGTCCCTGCCTGGCACGGAAATCAAGGACGTAGGCCTGTGTGAGCACCTATCCACAGAACTACCCATCTATGAAATGGGCTGTGCAACCAGCGTGGAGAAATGGCTCATGGACAACTGTGGAGTTATTCTGGGAATCTGTGTCGGTGTGGCAGTCATTGAGCTCCTTGGGATGAtcctctccatgtgtctgtgCAAGAGTGTTGTCGTGGAGGATTATACCAAAGTACCGAAGTACTGAGCTGAAGACAGAGCCAGcttcacaccacacacagatgGATGGACtcttttcatctctctctctctcctctctctctctctctctctctctctctctctctctctctctctctctccttgtctcacATTcttatgaacacacacaaataagacagcTGTCTCCACCATTTGAGCTTCTCCTGCCTTGACAGCTGTGCAAATTTCTCacggcccacacacacacacacacacacacacacacacacacacacacacacacctctcaatCAAGCTATGACACTTGTTGGAAATGCCTCCACAAGTAACCATTGTTGTCTTATGATTTTGTCAAAAGGAGacttttttgatgttttggTAATAGTTTTTGGTGGAGGCCTGAGAAATTTGCGGTGTGATACTATGCAAATGTTCatttatgtgttgttttgttttccttggCTGACCTCAATGAAGCGCTTAACATAGTAGTAGAGAGAGCACTTTAGTGACATTTGCTGAGCTGAGAGCCGGAGCATCTTCTGACTCTAGGGCATGGAGATGAGAGGGAGACTGAAGGGTGTGGGTGGGTGCGAGGTCGACGCACTCAAGGATTAGTCCCACTTTGTGATCGTGCAGCTGGTATTTTTGGTGCAGAGGGTGGAGGAGAGGCCCAAGGCTGAGCCTGGGCAGGGCTGCTGTGGTGGAGGTTTGGGCTTCTGTCATCAGATACAGTTTACACccaccgcctcctcctcccccctccctccctcctgctATCCATTATCTGTTAGAGTCTCTAAATCACGTCTCTGTCCTCTCAAGTGTGTCTGACTGGTAAATAGTAGCTTTCCAAAATGACTAGTTTTGCATgaagtaagtgtgtgtatgaTGTGTTGAGTgagtattttatttcttattttatatTCTCATgtcatctctgtttttttttacaactgtgtatatatatatgactggTAAGGGATCATGGCACTTCAGTGCTTGGTCAGCGTTTTATATGGGAAAGCTGTCAGCCACATGCTGTTGTTGTAAGAGTGCTATTGTTCTTTGTTTCCTTTCTTTTGTTCTTGATGTACAGAATGTGGCTGCCACAGCAGCTCGTCAGCACTATTTTGGTCTGAATCAGAGAAATTGGAACCCTTAGAGTGAATCTGTCATCACTAAAGCtatattttaatttctttataaCAGCATGAGTTTGTGAACTGATAACATACCATAGCGCCTGCCCCAAACATCTTTATTTAAGCTCCTCACACCTGCCTTCATTTATAAAAATCTTGTTTTCATCATCATAGCAGTAACGTGAAAATGGCAGCTGTGTGACCACAAAGTATTTTCCCTTCTCTGCATGATAGTTTGTTTTCCCAGAAGTATTTCAGAGGCCG

Function

NR:

description
PREDICTED: CD82 antigen-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K06509 KAI1, CD82, TSPAN27; CD82 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808992.1 True 2318 mRNA 0.46 9 19987783 20012310

Neighbor

gene id symbol gene type direction distance location
tspan18b tspan18 coding downstream 32968 19885911 ~ 19954815 (-)
caprin1b caprin1 coding downstream 174910 19799132 ~ 19812873 (-)
nat10 nat10 coding downstream 189645 19788711 ~ 19798138 (-)
LOC120563329 NA coding downstream 225873 19753404 ~ 19761910 (-)
LOC120563845 LOC103375932,LOC108230170,LOC106526839 coding downstream 280656 19700154 ~ 19707127 (-)
LOC120564329 tp53i11 coding upstream 3859 20016169 ~ 20059123 (-)
si:dkey-29p10.4 NA coding upstream 63181 20075491 ~ 20083600 (-)
LOC120564471 LOC104960979,LOC103355225,LOC103150264,LOC103466396,LOC106915861 coding upstream 75818 20088128 ~ 20115384 (-)
bncr NA coding upstream 240489 20252799 ~ 20255338 (-)
LOC120563520 NA coding upstream 243056 20255366 ~ 20256420 (-)
G86575 lmo2 non-coding downstream 164410 19821540 ~ 19823373 (-)
G86566 NA non-coding downstream 210740 19774307 ~ 19777043 (-)
G86549 NA non-coding downstream 262590 19723973 ~ 19725193 (-)
G86543 LOC104950121,LOC106908881,LOC103380454 non-coding downstream 291968 19694995 ~ 19695815 (-)
G86540 LOC103375930 non-coding downstream 308694 19674923 ~ 19679089 (-)
G86605 NA non-coding upstream 2028 20014338 ~ 20015812 (-)
G86652 reln non-coding upstream 229123 20241433 ~ 20241850 (-)
G86660 NA non-coding upstream 238580 20250890 ~ 20264206 (-)
G86686 NA non-coding upstream 390434 20402744 ~ 20461823 (-)
G86761 NA non-coding upstream 686505 20698815 ~ 20699637 (-)
cep152 cep152,LOC104960117 other downstream 414095 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 599208 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 670305 19315385 ~ 19317478 (-)
LOC120564082 svip other downstream 827296 19156758 ~ 19160487 (-)
G86194 tph1 other downstream 976867 19007196 ~ 19010916 (-)
G86638 NA other upstream 240329 20252639 ~ 20259259 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 794572 20806882 ~ 20829235 (-)
LOC120563850 NA other upstream 865358 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 1357221 21369531 ~ 21372509 (-)
G87140 NA other upstream 1700732 21713042 ~ 21713554 (-)

Expression


Co-expression Network