LOC120564200


Basic Information

Item Value
gene id LOC120564200
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 19549062 ~ 19557179 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809017.1
TTACTTTATAACTAGTGTTTTAAAAACTGAGTTTAACATTTTCCAACCCTTGATATTTCGGAGATGTATGGATCCTCCCATACACACTTCAGTAGTGTCTGAGGATCTCGACGCGCTGCTGATTTAAGTTTCACACAGATAAACATGATAGTCTGGATGGTGATTGTAGCTGTGGTTTTTCTCGCCCTTTTATTCCGCCATCCGCACTTTTTCCAGGATGTCCAATACGTGCGGGATAAAATACAAGCGAGGCGTCGTGTCTTAAAATACAAGCAGACTAATTACTCCATCCTGGACCGGTTTTTAGAAGTGGTGAAGGCGCAGCCACACAAGCCGTTCATCCTTTTTAACGGTGAAACTTTCACCTACCAGGATGCGGATGAGCTCAGTAACAAAGCTGCACGAGTTTTTCTGCACAATGGACTTGTTAAAGAAGGAGACACGGTTGCGCTGTTCCTCAGAAATGAGCCGATGTTCCTGTGGTTGTGGTTAGGTTTGGTAAAGATCGGATGTAACGCTGCTTTTCTCAACTACAACATCCGATCCAAGTCCCTGTTCCACTGCTTCAGCAGAAGCGGAGCCAAGACTCTGGTGGCAGCTGAAGAGTTACACAATGCTGTAGAGGAGCTTCTGCCCAGTCTGCTGGAGCAGCAGGTCACGGTTTTCATCCTGGCTGACCGATGCAGAACTGCAAATATGGAGAGCTTCAAAGACAAAATGAGCCAGGCCTCCTCTAAGCCTCTGTCCAATGATTTAAGGTCCCATTTAACCTTACAGAGTCCTGCAGCCTACATATATACATCAGGGACAACAGGTCTCCCTAAAGCAGCAATAATCTCTCATGCCAAACTGTGGACCCTAGCTTGCAGTATGTCTATGGCAGGAGTGACCTCCCAAGATGTGCTTTTTATTAGTCTCCCTCTCTATCACACCACGGGTTTCCTCGGATTCATTTCGGTCATTGAGAGGGGTAACACATTGGCTTTGAGGAGTAAATTTTCTGCATCTCAGTTCTGGGACGACTGCAGAAAATATAACGTCACGGTCATAATGTTTATAGGTGAAATGATGCGTTACCTCTGCAACACACCAAAAAAACCTAATGATCAAAGCCACAAAGTGAGACTTGCGATAGGCAGCGGGTTAAGAGCCGATGTTTGGAGGTACTTCATAAGCAGGTTTGGGAACGTTCAAATCAAAGAGTTTTATGGAGCAACTGAAGGGAATTTTTCTCTGCTGAATTACACCGGCAAGATTGGAGCTGTTGGCCGAGACACCTTcctcaacaaaTGGGTTTTTCCATATGCTGTGATCAAATTCGACGCAGAAAAAGGAACACCTCTGAGGGATTCTTCTGGTCTCTGCATAGAGGCTGCCAAAGGTGAACCTGGACTTCTGGTATCTGAAATATCAACAAGGGCTCCTTTCGCTGGATACGTGAGAGACCTGCAGCAAAATGAGAAGAAGAGGCTGCATGACGTCTTCAAGAAAGGAGACTTGTACTTCAACACTGGTGACCTGCTGTGCATTGATGAAGATAATTTCATTTACTTTAAGGATCGAGTCGGAGACACTTTCAGATGGAAAGGCGAGAACGTGGCTACAACTGAAGTGGCTGACATCATCACACTGCTTGACTGCATCAAAGAAGCCAACGTTTATGGAGTCGAAGTGCCAGGTCAGGAGGGGAGAGCTGGAATGGCTACCGTCACTTTAAGTGAAACGCAGAGATTTGACCCTGCAGATGTTTTTAAACATGTTGTAAGCTTCCTGCCGGCCTACGCAAGGCCATGTTTTCTTAGGATTCAGAGCTCCTTGGACGTTACAAGCACGTTCAAGCATATGAAGGTGAAGCTGGCGGAGGAGGGTTTCAACCCAAATCAAATAACCGACCCGCTCTACTTTctggatgaaaaaaacaaaaattacgTCCAGCTTACGGTGGACATATTCAACTCAGTTACATCAGGAAAGATCAGAATTTAAAGTGGCTTTTGTTGCCTATCCTGCTTGCACTGTAAAACATCAGCCACCTGTGATGTTCAGTACATTTAAGGAGTTGTTTTGTGATGAAGTCTTGTAATTTTATCTTCATCTGTTTACTTTtttgtacttctacttcagCAGTAATTTAATGTGCACTGAGATTTTAGAGAAAATCCTGCACACTGActattacgcaagcaataatttatttagaagaaaaatacaatgtttcggtctcagaccttcatcaggtaaatgtGCACTGAGATGTAATAGCTTCACTTAGAGCAAGAAAGCAAGTTTTTTTCTAGTAgagaaaactgacagctgtacgCTCCTTATTCAAACAGTGAGGTGTCACTTCTTACCATTCTGATCTATTGAGGCTATTGTGATTATGGTTGTTGAATGTTTGTTGGCAAGTCCCTTCCCTTTCTTTGGAGCTTAAGGATTTTAGGATAATAATTTAGATTTAGAATGATTattttagatttcttttttttttctggtcctTGTTATATATAATTTCAACTCCTGGCCTTTATTTGTGCTCTACATAGTTTTAAACAATGATTTgaaaattgattttatttttaactggTTATGAAACTCAATTTAATTCGGATGCCTCTTTATGACTTACATAAGCAAATGAGACCATCAGTGAGAAGATTGCCTATTTTTTATATGTTATTCTTAATGCCTGTCTTAAAATAATCACATGACTGGTTTGTCACATAATGGGTGACGTGTAACAACCTGTTTCCTCCTTCCTACCTTTTAAATAAATCTTCATCTGGGTTCTTTTAAAGCACAGCAAAGTCTTTCTGATC
>XM_039809018.1
ATGTTACTTTATAACTAGTGTTTTAAAAACTGAGTTTAACATTTTCCAACCCTTGATATTTCGGAGATGTATGGATCCTCCCATACACACTTCAGTAGTGTCTGAGGATCTCGACGCGCTGCTGATTTAAGTTTCACACAGATAAACATGATAGTCTGGATGGTGATTGTAGCTGTGGTTTTTCTCGCCCTTTTATTCCGCCATCCGCACTTTTTCCAGGATGTCCAATACGTGCGGGATAAAATACAAGCGAGGCGTCGTGTCTTAAAATACAAGCAGACTAATTACTCCATCCTGGACCGGTTTTTAGAAGTGGTGAAGGCGCAGCCACACAAGCCGTTCATCCTTTTTAACGGTGAAACTTTCACCTACCAGGATGCGGATGAGCTCAGTAACAAAGCTGCACGAGTTTTTCTGCACAATGGACTTGTTAAAGAAGGAGACACGGTTGCGCTGTTCCTCAGAAATGAGCCGATGTTCCTGTGGTTGTGGTTAGGTTTGGTAAAGATCGGATGTAACGCTGCTTTTCTCAACTACAACATCCGATCCAAGTCCCTGTTCCACTGCTTCAGCAGAAGCGGAGCCAAGACTCTGGTGGCAGCTGAAGAGTTACACAATGCTGTAGAGGAGCTTCTGCCCAGTCTGCTGGAGCAGCAGGTCACGGTTTTCATCCTGGCTGACCGATGCAGAACTGCAAATATGGAGAGCTTCAAAGACAAAATGAGCCAGGCCTCCTCTAAGCCTCTGTCCAATGATTTAAGGTCCCATTTAACCTTACAGAGTCCTGCAGCCTACATATATACATCAGGGACAACAGGTCTCCCTAAAGCAGCAATAATCTCTCATGCCAAACTGTGGACCCTAGCTTGCAGTATGTCTATGGCAGGAGTGACCTCCCAAGATGTGCTTTTTATTAGTCTCCCTCTCTATCACACCACGGGTTTCCTCGGATTCATTTCGGTCATTGAGAGGGGTAACACATTGGCTTTGAGGAGTAAATTTTCTGCATCTCAGTTCTGGGACGACTGCAGAAAATATAACGTCACGGTCATAATGTTTATAGGTGAAATGATGCGTTACCTCTGCAACACACCAAAAAAACCTAATGATCAAAGCCACAAAGTGAGACTTGCGATAGGCAGCGGGTTAAGAGCCGATGTTTGGAGGTACTTCATAAGCAGGTTTGGGAACGTTCAAATCAAAGAGTTTTATGGAGCAACTGAAGGGAATTTTTCTCTGCTGAATTACACCGGCAAGATTGGAGCTGTTGGCCGAGACACCTTcctcaacaaaTGGGTTTTTCCATATGCTGTGATCAAATTCGACGCAGAAAAAGGAACACCTCTGAGGGATTCTTCTGGTCTCTGCATAGAGGCTGCCAAAGGTGAACCTGGACTTCTGGTATCTGAAATATCAACAAGGGCTCCTTTCGCTGGATACGTGAGAGACCTGCAGCAAAATGAGAAGAAGAGGCTGCATGACGTCTTCAAGAAAGGAGACTTGTACTTCAACACTGGTGACCTGCTGTGCATTGATGAAGATAATTTCATTTACTTTAAGGATCGAGTCGGAGACACTTTCAGATGGAAAGGCGAGAACGTGGCTACAACTGAAGTGGCTGACATCATCACACTGCTTGACTGCATCAAAGAAGCCAACGTTTATGGAGTCGAAGTGCCAGGTCAGGAGGGGAGAGCTGGAATGGCTACCGTCACTTTAAGTGAAACGCAGAGATTTGACCCTGCAGATGTTTTTAAACATGTTAGCTCCTTGGACGTTACAAGCACGTTCAAGCATATGAAGGTGAAGCTGGCGGAGGAGGGTTTCAACCCAAATCAAATAACCGACCCGCTCTACTTTctggatgaaaaaaacaaaaattacgTCCAGCTTACGGTGGACATATTCAACTCAGTTACATCAGGAAAGATCAGAATTTAAAGTGGCTTTTGTTGCCTATCCTGCTTGCACTGTAAAACATCAGCCACCTGTGATGTTCAGTACATTTAAGGAGTTGTTTTGTGATGAAGTCTTGTAATTTTATCTTCATCTGTTTACTTTtttgtacttctacttcagCAGTAATTTAATGTGCACTGAGATTTTAGAGAAAATCCTGCACACTGActattacgcaagcaataatttatttagaagaaaaatacaatgtttcggtctcagaccttcatcaggtaaatgtGCACTGAGATGTAATAGCTTCACTTAGAGCAAGAAAGCAAGTTTTTTTCTAGTAgagaaaactgacagctgtacgCTCCTTATTCAAACAGTGAGGTGTCACTTCTTACCATTCTGATCTATTGAGGCTATTGTGATTATGGTTGTTGAATGTTTGTTGGCAAGTCCCTTCCCTTTCTTTGGAGCTTAAGGATTTTAGGATAATAATTTAGATTTAGAATGATTattttagatttcttttttttttctggtcctTGTTATATATAATTTCAACTCCTGGCCTTTATTTGTGCTCTACATAGTTTTAAACAATGATTTgaaaattgattttatttttaactggTTATGAAACTCAATTTAATTCGGATGCCTCTTTATGACTTACATAAGCAAATGAGACCATCAGTGAGAAGATTGCCTATTTTTTATATGTTATTCTTAATGCCTGTCTTAAAATAATCACATGACTGGTTTGTCACATAATGGGTGACGTGTAACAACCTGTTTCCTCCTTCCTACCTTTTAAATAAATCTTCATCTGGGTTCTTTTAAAGCACAGCAAAGTCTTTCTGATC
>XM_039809019.1
ATGTTACTTTATAACTAGTGTTTTAAAAACTGAGTTTAACATTTTCCAACCCTTGATATTTCGGAGATGTATGGATCCTCCCATACACACTTCAGTAGTGTCTGAGGATCTCGACGCGCTGCTGATTTAAGTTTCACACAGATAAACATGATAGTCTGGATGGTGATTGTAGCTGTGGTTTTTCTCGCCCTTTTATTCCGCCATCCGCACTTTTTCCAGGATGTCCAATACGTGCGGGATAAAATACAAGCGAGGCGTCGTGTCTTAAAATACAAGCAGACTAATTACTCCATCCTGGACCGGTTTTTAGAAGTGGTGAAGGCGCAGCCACACAAGCCGTTCATCCTTTTTAACGGTGAAACTTTCACCTACCAGGATGCGGATGAGCTCAGTAACAAAGCTGCACGAGTTTTTCTGCACAATGGACTTGTTAAAGAAGGAGACACGGTTGCGCTGTTCCTCAGAAATGAGCCGATGTTCCTGTGGTTGTGGTTAGGTTTGGTAAAGATCGGATGTAACGCTGCTTTTCTCAACTACAACATCCGATCCAAGTCCCTGTTCCACTGCTTCAGCAGAAGCGGAGCCAAGACTCTGGTGGCAGCTGAAGAGTTACACAATGCTGTAGAGGAGCTTCTGCCCAGTCTGCTGGAGCAGCAGGTCACGGTTTTCATCCTGGCTGACCGATGCAGAACTGCAAATATGGAGAGCTTCAAAGACAAAATGAGCCAGGCCTCCTCTAAGCCTCTGTCCAATGATTTAAGGTCCCATTTAACCTTACAGAGTCCTGCAGCCTACATATATACATCAGGGACAACAGGTCTCCCTAAAGCAGCAATAATCTCTCATGCCAAACTGTGGACCCTAGCTTGCAGTATGTCTATGGCAGGAGTGACCTCCCAAGATGTGCTTTTTATTAGTCTCCCTCTCTATCACACCACGGGTTTCCTCGGATTCATTTCGGTCATTGAGAGGGGTAACACATTGGCTTTGAGGAGTAAATTTTCTGCATCTCAGTTCTGGGACGACTGCAGAAAATATAACGTCACGGTCATAATGTTTATAGGTGAAATGATGCGTTACCTCTGCAACACACCAAAAAAACCTAATGATCAAAGCCACAAAGTGAGACTTGCGATAGGCAGCGGGTTAAGAGCCGATGTTTGGAGGTACTTCATAAGCAGGTTTGGGAACGTTCAAATCAAAGAGTTTTATGGAGCAACTGAAGGGAATTTTTCTCTGCTGAATTACACCGGCAAGATTGGAGCTGTTGGCCGAGACACCTTcctcaacaaaTGGGTTTTTCCATATGCTGTGATCAAATTCGACGCAGAAAAAGGAACACCTCTGAGGGATTCTTCTGGTCTCTGCATAGAGGCTGCCAAAGGTGAACCTGGACTTCTGGTATCTGAAATATCAACAAGGGCTCCTTTCGCTGGATACGTGAGAGACCTGCAGCAAAATGAGAAGAAGAGGCTGCATGACGTCTTCAAGAAAGGAGACTTGTACTTCAACACTGGTGACCTGCTGTGCATTGATGAAGATAATTTCATTTACTTTAAGGATCGAGTCGGAGACACTTTCAGATGGAAAGGCGAGAACGTGGCTACAACTGAAGTGGCTGACATCATCACACTGCTTGACTGCATCAAAGAAGCCAACGTTTATGGAGTCGAAGTGCCAGAGCTCCTTGGACGTTACAAGCACGTTCAAGCATATGAAGGTGAAGCTGGCGGAGGAGGGTTTCAACCCAAATCAAATAACCGACCCGCTCTACTTTctggatgaaaaaaacaaaaattacgTCCAGCTTACGGTGGACATATTCAACTCAGTTACATCAGGAAAGATCAGAATTTAAAGTGGCTTTTGTTGCCTATCCTGCTTGCACTGTAAAACATCAGCCACCTGTGATGTTCAGTACATTTAAGGAGTTGTTTTGTGATGAAGTCTTGTAATTTTATCTTCATCTGTTTACTTTtttgtacttctacttcagCAGTAATTTAATGTGCACTGAGATTTTAGAGAAAATCCTGCACACTGActattacgcaagcaataatttatttagaagaaaaatacaatgtttcggtctcagaccttcatcaggtaaatgtGCACTGAGATGTAATAGCTTCACTTAGAGCAAGAAAGCAAGTTTTTTTCTAGTAgagaaaactgacagctgtacgCTCCTTATTCAAACAGTGAGGTGTCACTTCTTACCATTCTGATCTATTGAGGCTATTGTGATTATGGTTGTTGAATGTTTGTTGGCAAGTCCCTTCCCTTTCTTTGGAGCTTAAGGATTTTAGGATAATAATTTAGATTTAGAATGATTattttagatttcttttttttttctggtcctTGTTATATATAATTTCAACTCCTGGCCTTTATTTGTGCTCTACATAGTTTTAAACAATGATTTgaaaattgattttatttttaactggTTATGAAACTCAATTTAATTCGGATGCCTCTTTATGACTTACATAAGCAAATGAGACCATCAGTGAGAAGATTGCCTATTTTTTATATGTTATTCTTAATGCCTGTCTTAAAATAATCACATGACTGGTTTGTCACATAATGGGTGACGTGTAACAACCTGTTTCCTCCTTCCTACCTTTTAAATAAATCTTCATCTGGGTTCTTTTAAAGCACAGCAAAGTCTTTCTGATC

Function

GO: NA

KEGG:

id description
ko00130 Ubiquinone and other terpenoid-quinone biosynthesis
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809017.1 True 2819 mRNA 0.42 10 19549062 19557176
XM_039809018.1 False 2774 mRNA 0.42 10 19549062 19557179
XM_039809019.1 False 2691 mRNA 0.42 9 19549062 19557179

Neighbor

gene id symbol gene type direction distance location
zgc:101540 LOC100694233,LOC102305394,LOC102779799,LOC101472508,LOC102208223 coding downstream 1879 19537502 ~ 19547183 (-)
duox2 duoxa2 coding downstream 112406 19434249 ~ 19436656 (-)
fan1 fan1 coding downstream 125840 19417626 ~ 19423222 (-)
LOC120564004 LOC103363835,LOC104931412,LOC104960084 coding downstream 133125 19397238 ~ 19415937 (-)
LOC120564015 rfx7,LOC100694937 coding downstream 190818 19341610 ~ 19358244 (-)
atp8b4 atp8b4 coding upstream 24608 19581787 ~ 19598362 (-)
parp16 parp16 coding upstream 66486 19623665 ~ 19629890 (-)
trnap-agg_7 NA coding upstream 125667 19682846 ~ 19682917 (-)
LOC120563845 LOC103375932,LOC108230170,LOC106526839 coding upstream 142975 19700154 ~ 19707127 (-)
LOC120563329 NA coding upstream 196225 19753404 ~ 19761910 (-)
G86519 NA non-coding downstream 101 19548160 ~ 19548961 (-)
G86432 NA non-coding downstream 17440 19530576 ~ 19531622 (-)
G86430 NA non-coding downstream 21925 19525687 ~ 19527137 (-)
G86400 LOC101161482 non-coding downstream 165055 19383619 ~ 19384007 (-)
G86395 NA non-coding downstream 174123 19371007 ~ 19374939 (-)
G86529 sqrdl non-coding upstream 44302 19601481 ~ 19603243 (-)
G86517 NA non-coding upstream 52226 19609405 ~ 19618046 (-)
G86540 LOC103375930 non-coding upstream 117744 19674923 ~ 19679089 (-)
G86543 LOC104950121,LOC106908881,LOC103380454 non-coding upstream 137816 19694995 ~ 19695815 (-)
G86549 NA non-coding upstream 166794 19723973 ~ 19725193 (-)
G86402 LOC103363837 other downstream 160487 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 231584 19315385 ~ 19317478 (-)
LOC120564082 svip other downstream 388575 19156758 ~ 19160487 (-)
G86194 tph1 other downstream 538146 19007196 ~ 19010916 (-)
syt7a LOC102215913,LOC101470916,LOC102782335,LOC103466506,LOC103141308,LOC107388681,LOC100690092 other downstream 852964 18614588 ~ 18696098 (-)
cep152 cep152,LOC104960117 other upstream 273 19557452 ~ 19573688 (-)
G86638 NA other upstream 695460 20252639 ~ 20259259 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 1249703 20806882 ~ 20829235 (-)
LOC120563850 NA other upstream 1320489 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 1812352 21369531 ~ 21372509 (-)

Expression


Co-expression Network