parp16 (parp16)


Basic Information

Item Value
gene id parp16
gene name parp16
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 19623665 ~ 19629890 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809049.1
TACGCTTTTTCTACAGCACTGGCTTGAACGCAGCAGTTCGttcagctagcattagctcttgctGCAGTGCTATGAGTTGAGCACGACTGAAGTGCTGGGAATGCAGCCACCGCTCCCACCTGAGGCAGTCAGAGAGCTGGTGTGCTCCTGTCTGCACAGAGACCCAGTAGCAGCAGACCTCCGCTGCAGCCTGTTTGTTGCCGCTGCACAGAACTACAAGAGGGACTCTTTGCTCAGACCCTTTCCCCCTCGATACATAAGTGGTGACAATAAGGACTTTGAGGAGCTgTTGGCAGATGTGCACTCTTTGCCTGGTGTGAGAGAGCTGGTGAGACTACGACCCAGAGAGGGAGATCATCATCTGGCTCTCACACACTGGATTCTCTCTTCAAAGAGCTTTGCTGTGAAGACATTACAGAAAGATGAGTATGCCAAACTTTGTAACCTGACGGAAAATGAAGGGATTTCTGCACCTGTGCCAGACTTCCTGTTTGCGCTGGAGTACTGTGATCAGATGAACGCCAGGTTTGAGAAGATGAGGGAAGGTAGAGACGTCTTCTATGCATTCCACGGGAGCCGCCTGGAAAACTTCCACTCAATCATTCACAATGGGCTGCATTGTCACCTCAATAAGAACTCAGTGTTTGGAGAGGGGACCTACCTCACCAGTGACCTCAGCATGGCTGTCCTCTACAGTCCCCACAGCAGCGGCTGGCGAGAGAGTCTCCTGGGTCCACTGCTCAGCTGTGTTGCCTTGTGCGAAGTCATTGATCACCCAGATGTGAAGTGCCAGGTGAAGAAAAAAGATTCTGAAACCATTGACCGTCAGCGCTCAAGAGCAAAGAACAGCGAAGGAGGGGACGTACCGGAGAAGTACTTTGTAGTCACCAACAATCAGCTTTTGCGAGTCAAGTACCTGCTTGTTTACTCTCAGAGGAGGCACCTGTCCAGacGTTCCCGCAGCACATCCTGGCTCCTCAGGCACCATTTTGCCATCATGATGAGTCTCTACCTTCTGCTGCTCATATTCATCGGTGCCTTTAACTCCAACACCTTTGTATCCTTTTGGAACAGACTGTTCAGGTGACAAGACAACAGAAGAGACGGCCTGGATGTTTGTTATCCCCCGTGCCTTCCTGATCACAGACTGACTGGAGGCTTGAGCAAAGATAAAGTTTTATGCACCTTTTATACTGTTTTCTCTCTACAATTGTTCTGTgtttgtacaaatgaaatgggtAATAAGACAATGCTGCATTTTGAAATTGTTATGCAATTTTTCATCTGTAATTTGTTTGGTTTATTAAACACTGTTTTGTCCCTGATAATATCTAATGTGGGTTTAGTCCTGAGAAAACACAGTCCTACTAACCAAAcggttaaaagtaaaaaaacatcaTGTTGTTGAAATAAGTGTACAGCGAAGGGTCAAGCATtaagttgtcttttttttgtttgtttgttaggtCTTAAGTTCGGAGACATATTAGCACATTAACTGATCGCATTGACTCGTTAGCACCAGTGACTCCTGATCTGTTGATCAGGCACTAATGACAATGTGTCCCAGTTTAAATTCTTACTTTGTAATGTTATGATTTTGTGCGACTCAGTTATGGGTAGGGACCTTTTATAACCCATTATTTAAGTGTAACTTTAAGGTATTGAATATAATGGTAAGGTTTAATAAAGGAAAAATATGAGGTTATAAATACATGCATTTGGATCACAAAAAGGCTAATGATAACCTCATTTATAATAATTTCAGATATGcttttaataaactgtatattCGCTTAGGCAA
>XM_039809050.1
CTACGCTTTTTCTACAGCACTGGCTTGAACGCAGCAGTTCGttcagctagcattagctcttgctGCAGTGCTATGAGTTGAGCACGACTGAAGTGCTGGGAATGCAGCCACCGCTCCCACCTGAGGCAGTCAGAGAGCTGGTGTGCTCCTGTCTGCACAGAGACCCAGTAGCAGCAGACCTCCGCTGCAGCCTGTTTGTTGCCGCTGCACAGAACTACAAGAGGGACTCTTTGCTCAGACCCTTTCCCCCTCGATACATAAGTGGTGACAATAAGGACTTTGAGGAGCTgTTGGCAGATGTGCACTCTTTGCCTGGTGTGAGAGAGCTGGTGAGACTACGACCCAGAGAGGGAGATCATCATCTGGCTCTCACACACTGGATTCTCTCTTCAAAGAGCTTTGCTGTGAAGACATTACAGAAAGATGAGTATGCCAAACTTTGTAACCTGACGGAAAATGAAGGGATTTCTGCACCTGTGCCAGACTTCCTGTTTGCGCTGGAGTACTGTGATCAGATGAACGCCAGGTTTGAGAAGATGAGGGAAGGTAGAGACGTCTTCTATGCATTCCACGGGAGCCGCCTGGAAAACTTCCACTCAATCATTCACAATGGGCTGCATTGTCACCTCAATAAGAACTCAGTGTTTGGAGAGGGGACCTACCTCACCAGTGACCTCAGCATGGCTGTCCTCTACAGTCCCCACAGCAGCGGCTGGCGAGAGAGTCTCCTGGGTCCACTGCTCAGCTGTGTTGCCTTGTGCGAAGTCATTGATCACCCAGATGTGAAGTGCCAGGTGAAGAAAAAAGATTCTGAAACCATTGACCGTCAGCGCTCAAGAGCAAAGAACAGCGAAGGAGGGGACGTACCGGAGAAGTACTTTGTAGTCACCAACAATCAGCTTTTGCGAGTCAAGTACCTGCTTGTTTACTCTCAGAGGAGGCACCTGTCCAGACTGTTCAGGTGACAAGACAACAGAAGAGACGGCCTGGATGTTTGTTATCCCCCGTGCCTTCCTGATCACAGACTGACTGGAGGCTTGAGCAAAGATAAAGTTTTATGCACCTTTTATACTGTTTTCTCTCTACAATTGTTCTGTgtttgtacaaatgaaatgggtAATAAGACAATGCTGCATTTTGAAATTGTTATGCAATTTTTCATCTGTAATTTGTTTGGTTTATTAAACACTGTTTTGTCCCTGATAATATCTAATGTGGGTTTAGTCCTGAGAAAACACAGTCCTACTAACCAAAcggttaaaagtaaaaaaacatcaTGTTGTTGAAATAAGTGTACAGCGAAGGGTCAAGCATtaagttgtcttttttttgtttgtttgttaggtCTTAAGTTCGGAGACATATTAGCACATTAACTGATCGCATTGACTCGTTAGCACCAGTGACTCCTGATCTGTTGATCAGGCACTAATGACAATGTGTCCCAGTTTAAATTCTTACTTTGTAATGTTATGATTTTGTGCGACTCAGTTATGGGTAGGGACCTTTTATAACCCATTATTTAAGTGTAACTTTAAGGTATTGAATATAATGGTAAGGTTTAATAAAGGAAAAATATGAGGTTATAAATACATGCATTTGGATCACAAAAAGGCTAATGATAACCTCATTTATAATAATTTCAGATATGcttttaataaactgtatattCGCTTAGGCAA

Function

symbol description
parp16 Predicted to enable NAD+ ADP-ribosyltransferase activity; kinase binding activity; and protein serine/threonine kinase activator activity. Predicted to be involved in endoplasmic reticulum unfolded protein response and protein ADP-ribosylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum tubular network and nuclear envelope. Is expressed in several structures, including liver; median fin fold; presumptive ectoderm; vasculature; and ventral mesoderm. Orthologous to human PARP16 (poly(ADP-ribose) polymerase family member 16).

NR:

description
PREDICTED: mono [ADP-ribose] polymerase PARP16

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG:

id description
K00774 PARP16; poly [ADP-ribose] polymerase 16

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809049.1 True 1804 mRNA 0.44 7 19623665 19629889
XM_039809050.1 False 1682 mRNA 0.44 7 19623665 19629890

Neighbor

gene id symbol gene type direction distance location
atp8b4 atp8b4 coding downstream 25303 19581787 ~ 19598362 (-)
LOC120564200 NA coding downstream 66486 19549062 ~ 19557179 (-)
zgc:101540 LOC100694233,LOC102305394,LOC102779799,LOC101472508,LOC102208223 coding downstream 76482 19537502 ~ 19547183 (-)
duox2 duoxa2 coding downstream 187009 19434249 ~ 19436656 (-)
fan1 fan1 coding downstream 200443 19417626 ~ 19423222 (-)
trnap-agg_7 NA coding upstream 52956 19682846 ~ 19682917 (-)
LOC120563845 LOC103375932,LOC108230170,LOC106526839 coding upstream 70264 19700154 ~ 19707127 (-)
LOC120563329 NA coding upstream 123514 19753404 ~ 19761910 (-)
nat10 nat10 coding upstream 158821 19788711 ~ 19798138 (-)
caprin1b caprin1 coding upstream 169242 19799132 ~ 19812873 (-)
G86517 NA non-coding downstream 5619 19609405 ~ 19618046 (-)
G86529 sqrdl non-coding downstream 20422 19601481 ~ 19603243 (-)
G86519 NA non-coding downstream 74704 19548160 ~ 19548961 (-)
G86432 NA non-coding downstream 92043 19530576 ~ 19531622 (-)
G86430 NA non-coding downstream 96528 19525687 ~ 19527137 (-)
G86540 LOC103375930 non-coding upstream 45033 19674923 ~ 19679089 (-)
G86543 LOC104950121,LOC106908881,LOC103380454 non-coding upstream 65105 19694995 ~ 19695815 (-)
G86549 NA non-coding upstream 94083 19723973 ~ 19725193 (-)
G86566 NA non-coding upstream 144417 19774307 ~ 19777043 (-)
G86575 lmo2 non-coding upstream 191650 19821540 ~ 19823373 (-)
cep152 cep152,LOC104960117 other downstream 49977 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 235090 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 306187 19315385 ~ 19317478 (-)
LOC120564082 svip other downstream 463178 19156758 ~ 19160487 (-)
G86194 tph1 other downstream 612749 19007196 ~ 19010916 (-)
G86638 NA other upstream 622749 20252639 ~ 20259259 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 1176992 20806882 ~ 20829235 (-)
LOC120563850 NA other upstream 1247778 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 1739641 21369531 ~ 21372509 (-)
G87140 NA other upstream 2083152 21713042 ~ 21713554 (-)

Expression


Co-expression Network