LOC120564220


Basic Information

Item Value
gene id LOC120564220
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 5713068 ~ 5716665 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809056.1
tgcagtggatgtgacacTTGATCCTGATATAGTACATCCCAAACCCACTCGGCCTAATGATAGAGAACAGAGTGTCGATATGTCTCTTGCCAGCTGTCTGCTGActgaagatcagtttctgtgctccatctgtctggatgtgttcaGTGATCCAGTCACCATACCATGTGGACACAACTTCTGTAAAACCTGCATCACTAAACACTGGGATAGTAATGTCCGATGTCAGTGTCCCACCTGTAAAAAGGTTTTCAACACCAGACCTGAGCTGCAAGTCAATACTTTCATCTCTGAGATGGCTGCACAGTTCAGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagggtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggactcctactgtgagactcacctggagcctcatctgaCAAGATCAGGCctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAAGGCAGGATGTGTACGAAGCACGATAAACTGctggagctgttctgtaagacTGACCAGATGTGTATCTGCATGCTCTGTACCTACTCAGACCACAAGACACATGATGTTGTTCCTCTGAAAGACGGATATGAAGGAAAGAAGGCAGAGCTGGGGAAGACAGAGCCTGAAATCCagcagatgatccagaagagacgaATGAAGATTCAGGAGATCAAACAGTCAGTGGAGctcagtgaggaagatgcagacagagagatagcagaaggtgttcTTGTCTTCAGCGctctgaaggagtctgttgaGAGAAGCCAGGCCGAGCTCATCGACACaatcaaagagaagcagaaaaagacagagaaacaggCTGAAGGCTTcatcaaagagctggaacaggaaatctctgagctgaagaagagaggcactgaggtggagcagctcTCACAGTCTGAAGACCACCTCCACATCCTCCAGAGCTTTACTTCCCTGAATGCTGCTCCACCCACCAAGGACTGGACAAACATCAGCGTCCGTCCACCTAAATACGAGGGGACTATGGTGAGAGCTGTGTATCAGCTCGAGGAGACGCTCAGTGAACAGATGAAGAAGCTTTTTGAGGCCGAGCTGAAGAGGGTCCAGCGTtatgcagtggatgtgacacTTGATCCTGATATAGTACATCCCAAACCCACTCGGCCTAATGATAGAGAACAGGTAAATCAGGGTAACGAGTGTAGATGTGTCTTATCAAAGCAGGCTTTCACTTCAGGGAAGTTTTATTTCCAGGTTCATCTTAAGAAGTGGTCAGATTGGACTTTAGGAGTGGCCAGGAAGTTGACCAACATGAAGGAAAAAACCATACTGAGCCCGTCAAATGGTTACTGGACTGTATGTCATAAGCAGCAAATGTTGGGTACCAGTGGGTACTATGCTCCTTctactactatactatactatccTTCAGTCCGTCTCTCTCTGAAGACAAAACCTCAGAaagtgggggtgtttgtggattatgaggaAGGTCTGGTCTCATTTTATGACATTGATACTGCAGCTCTTATCTATTCCTTTACTGGCTGCTctttcactgagaaactctacCCATTCTTCAGTCCCTGCCCAAATGATGGTGTTAAAATACACAGCCCTAATGAGAGTTGTGTATTACAATGAAAAGGGAAGCAATTTTTCTGGATAAATCCAGAATTTTAAGCCCTAACTACCATTGTTATATCACCTCTGCATGGGACATAATGCCAGTCAGGGAAGGACTGTTGATTAAATATCCGAGCCTGGTCCGACAGCCTAGCTCTAGCAGGGATGATTCTTCATAATGATTAGCCACAATTCACTTTTGACAATGGACAGTTTAAGAAAGATATATTTGCCTCAGAGTAGATTAATttgattaaattattatttggaatgattgtttaaattatgtaagggataatgcCTGATGATGTGTCCATTATCAGGAATCCTGCTCATACCATGGCCTCTTGCCAAAGAAAAGAATTTAAGACTATACATTTATATGTGTTTTGCAATCAAAATCCAAACTAATACTAGAACAATCATTACCATCCCATAAGGTTATTGAGAGATCCAGCTAAGTGGAAAACAACCAAAGCTAACCCCTTAAAGGCTTCTGATgtttttgatcttttttttaaaatctattttGTAAACACAATATAttcatgtcactgtcaaaaaatatgtaaattggaattgggggtgtgatgaacagtggcaattatagtcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809056.1 True 2298 mRNA 0.44 2 5713068 5716665

Neighbor

gene id symbol gene type direction distance location
LOC120564218 NA coding downstream 5415 5702659 ~ 5707653 (-)
LOC120564013 NA coding downstream 238629 5468964 ~ 5474439 (-)
LOC120564012 NA coding downstream 247911 5447955 ~ 5465157 (-)
tmed6 NA coding downstream 265234 5444424 ~ 5447834 (-)
LOC120564748 NA coding downstream 284844 5424656 ~ 5428224 (-)
LOC120564221 NA coding upstream 6199 5722864 ~ 5726731 (-)
aass aass coding upstream 175168 5891833 ~ 5935799 (-)
fezf1 fezf1,LOC100711330 coding upstream 226375 5943040 ~ 5953680 (-)
cadps2 NA coding upstream 257220 5973885 ~ 6242209 (-)
slc13a1 slc13a1,LOC102214463 coding upstream 530950 6247615 ~ 6264698 (-)
G82689 NA non-coding downstream 22048 5655014 ~ 5691020 (-)
G82687 NA non-coding downstream 68332 5641797 ~ 5644736 (-)
G82616 NA non-coding downstream 86821 5210749 ~ 5626247 (-)
G82749 NA non-coding upstream 66806 5783471 ~ 5829244 (-)
G82750 NA non-coding upstream 75561 5792226 ~ 5829326 (-)
G82755 NA non-coding upstream 120539 5837204 ~ 5837798 (-)
G82766 NA non-coding upstream 164309 5880974 ~ 5887595 (-)
G82772 NA non-coding upstream 222353 5939018 ~ 5939741 (-)
faap24 LOC102781697 other downstream 229535 5477224 ~ 5483533 (-)
urahb NA other downstream 701127 5004392 ~ 5011941 (-)
G82246 NA other downstream 1434709 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 1545282 4076378 ~ 4167786 (-)
G82147 NA other downstream 2134684 3494391 ~ 3578384 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 1457357 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 1571230 7287895 ~ 7291427 (-)
met met other upstream 2022249 7738914 ~ 7832871 (-)
cav1 cav1 other upstream 2131400 7848065 ~ 7861228 (-)
LOC120564711 NA other upstream 3826005 9542670 ~ 9551419 (-)

Expression


Co-expression Network