LOC120564221


Basic Information

Item Value
gene id LOC120564221
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 5722864 ~ 5726731 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809057.1
CATCACATTTCctgaaataaaattatttcCTGAAGTCTATATCCTGATTCTCCCCAAAGACAACATTCAACTGAATCCAGCAGCTTTTTGTCAACAGCAGCATTTCTGCCAAACACTGAGTGTCGAAATGTCTGCTGCCAGCTGTCTGCTGActgaagatcagtttctgtgctccatctgtctggatgtgttcactgatccAGTCAGCACACCATGTGGACACAACTTCTGTAAAAACTGCATCACTGAACACTGGAATATTAATGTCCCCAATCAGTGTCCTAACTGTAAAGAGGTTTTCTACACCAGACCTGAGCTACGGGTCAATACTTTTATCTCTGAGATGGCTGCTCAGTTCAGACAGTCAGCTCAACCAAAATTCATCATCAGCAGTTTAGAGCAAGGGTCGAAACCAGCAGAAGTTCCCTGTGACGTCTGCACTGGAACCAAACTGATggccctgaagtcctgcctggtgtgtctggtcTCCTACTGTGAGACTCATCTGGAGCCTCATCTGACAATGTCAGGtctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAAGGCAGGATGTGTACGAAGCACGATAAACTGCTGGAGCTATTCTGTAAGACCGACcagatgtgtgtctgcatgctctgcACCATTTCAGACCACGTGCTACATGATGTTGTTCATTTGAAAGAAGAATATGAAGAAAAGAAGGCCAAGCTGGGGAAGACAGAGGCTGAAATTCagcagatgatccagaagagacaACTGAAGATTCAGGAGATCAAACACTCAGTGGAGctcagtgaggaagatgcagacagagagatagcaggaggtgttcaggtcttcacCGCTCTAAAGGAGTCTGTTGAGAGAAGCCAGGCTGAGCTCATCAACAcgatcaaagagaagcagagaaagagagagaaacaggctgAAGGCTTcatcaaagagctggaacaggaaatctcagagctgaagaagagaagcactgaggtggagcagctcTCACAGTCTGAAGACCACTTCCACGTCCTCCAGAGCTTTGCCTTCCTCAACACTGCTCCACCCACGAAGGACTGGACAGAAGTCAAAGTCCATCCACCAATTAAGGGAACTGTGGTGAGAGCTGTGAATCAGCTGGAGAATATGCTCAGTAAAcagatgaagaagctgctcGGCGAGGCCGAGCTGAAGATGGTCCAGCGGTCTGCAGTGGATGTGACActtgatcctgatacagcaCATCCCAAACTCATCTTGTCTGATGATGGAAAACAAGTTCAACATGGTGATGTAAAGAAGAATCTCTCAGACAATCCAGAAAGATTTGATACTGGTCCAAATGTTTTAGCAAAGCAGAGTTTCTCTTCAGGAAGATTTTATTACGAGGTTCAGGTTAAAGGGAAGACTCACTGGTATTTGGGAGTGGCCAGAGAGTCGATCAACAGGAAAGGAAGCATCACACCAAGCCCTCAGATTGGCTACTGGTTAATATGTTTGAGGAATGCAAACGAGTACAAATCTTGTGCTGACCACGTAATCAGTCTCTCTCTGAAGTCTCGTCCTgagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgacgttgatgctgcagctcttatctactcctttactggctgctccttcacAGAAAAACTCTACCCACTCTTTTGTCCTTGTAATAACAATGGTGGTAAAAACTCTGCCTCTCTAATCATCTCTCCTGTCAATCGCACTGAGTAGAACAAAAAGATTCACTATGATTTAATCAAATACATGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809057.1 True 1806 mRNA 0.46 2 5722864 5726731

Neighbor

gene id symbol gene type direction distance location
LOC120564220 NA coding downstream 6199 5713068 ~ 5716665 (-)
LOC120564218 NA coding downstream 15211 5702659 ~ 5707653 (-)
LOC120564013 NA coding downstream 248425 5468964 ~ 5474439 (-)
LOC120564012 NA coding downstream 257707 5447955 ~ 5465157 (-)
tmed6 NA coding downstream 275030 5444424 ~ 5447834 (-)
aass aass coding upstream 165102 5891833 ~ 5935799 (-)
fezf1 fezf1,LOC100711330 coding upstream 216309 5943040 ~ 5953680 (-)
cadps2 NA coding upstream 247154 5973885 ~ 6242209 (-)
slc13a1 slc13a1,LOC102214463 coding upstream 520884 6247615 ~ 6264698 (-)
iqub NA coding upstream 539733 6266464 ~ 6289451 (-)
G82689 NA non-coding downstream 31844 5655014 ~ 5691020 (-)
G82687 NA non-coding downstream 78128 5641797 ~ 5644736 (-)
G82616 NA non-coding downstream 96617 5210749 ~ 5626247 (-)
G82749 NA non-coding upstream 56740 5783471 ~ 5829244 (-)
G82750 NA non-coding upstream 65495 5792226 ~ 5829326 (-)
G82755 NA non-coding upstream 110473 5837204 ~ 5837798 (-)
G82766 NA non-coding upstream 154243 5880974 ~ 5887595 (-)
G82772 NA non-coding upstream 212287 5939018 ~ 5939741 (-)
faap24 LOC102781697 other downstream 239331 5477224 ~ 5483533 (-)
urahb NA other downstream 710923 5004392 ~ 5011941 (-)
G82246 NA other downstream 1444505 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 1555078 4076378 ~ 4167786 (-)
G82147 NA other downstream 2144480 3494391 ~ 3578384 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 1447291 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 1561164 7287895 ~ 7291427 (-)
met met other upstream 2012183 7738914 ~ 7832871 (-)
cav1 cav1 other upstream 2121334 7848065 ~ 7861228 (-)
LOC120564711 NA other upstream 3815939 9542670 ~ 9551419 (-)

Expression


Co-expression Network