LOC120564250


Basic Information

Item Value
gene id LOC120564250
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 4125627 ~ 4127757 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809099.1
TcgaaacttttattttgaagaagtGCCACCGGAAGCCCTTTTACTTACCGTGTCTAACTTGAGCAGTGCGGAGTCTGGTTGAAGAGGTTTCTTACCGCATCTTTGTTGTAGTAAACCGTTTCCCCCGCGTGAGTCCTGCTCTTTCCGCCACGTAGCTCATCAGATACAACCGAGGTGAACCACCAGAACCCGGATGTTTGGATAAACTTGTTCAAGTGGACGTTATAACCTCAGACTCATCTCCGTTAGCCAAGAATGCTAACTGAAGTTAGCATAGCGTGCTAGCTGGAAATAGACCTCGGCCACACAGCGCTAGTAGGAGAGACTATTGGATAGAGACCAAACTGTATGTTTCATGGACCCGGACGTAACTTACCAACCCAGCGCAAGTATCCGAGGGAGCGAACAGGTTTTAGCGGAGTCTGTCTGGAGGAAAAGTTTCTCAGATTTAGTAAAAATGACTAAAGTCCAAATGCTGAGAGCTTTTGTGAACcagcgactaactgcggctgctgaagagatatttgggctgtttgaaagaacgatagcagagtacgaggaggaacttGAGTTCAGTTTAAAAGAGAATCACCGACAACAGAAACTACTGGACGCTGTTTTAAACCCTGAAGTCCAGATACACAGAGCAGACGTCCAGCAGCTGTCGGTGGTGAAAGcagaggttccccctgagcagcaggagtggcactccagtctggaccaggaggacccagagccccccccacacattaaagaggaacaggaggaactctgGATCAGTCAGGAGgaagagcagcttcaagggctggaggaggctgatatcaagTTCCTGTTCACTTCTGTCAAGagtgaagaagatgatgaagagaaagctcagtcctcacagcttcatgaAAGCCAAACTGAGGagaacagagaggcagagagagcagaagctgatggagaggactgtgaaggaccagaaccagccaggaactcagaTCCAGATAGTCCTTTACAACCAGCTACTCATGACAAGACTGCAGACTCGTCTGAATCTCACACTAATGACAGTGCAGACTGGGAGGAGACTAGGGAACCTCAGTCAGGTTTAAACCCTCTGCAAAACAATGAAGTAGCTGTAAGTGATGTGGAATGTAATACTGGAAACACATCAGTTAGCTCCTCTGAATGTGCTGGAAGCTTTGGCCCCAAGAAACCTCTGCAGAACCACTCTGGAGTCCAAACAGGAGGGAAACCATTTTGTTGTTCAGTTTGTGGTAAAAGCTTCTCGCTGAATAAGACCTTAACGAATCACATGAGACTTCACTCAGAAGAAAAACGTTTCACCTGCTCATTTTGTGAATCACATTTCTCTTTCAGTAGCGAATTGATtagacacatgagaatccacacggGGGAaaaaccatttagttgtttgttttgtagtAAAAGATTTGCACACAAGCAACATCTGAAACGACACTTGGTCCTCCACACAGGGGAGAAATCTTTTAGTTGTTCAGTTTGTAGTAAAAGATTTGCTAGATCTGAAACTCTGAAACAACACATGGCCGTCCACATGGGGGAGAAATAATTAtttgttaaaggtgcaatatgtaatactgacagccagcgtttaaaatggttactgcagtccaaattcagAATACTGGAGAGAGctggcccctcctccccagactcaaagTTTCCAGGGTTTCCAGGTTGAGAACGCTGAACCCAGTGTCCCATAatcagtatgtttacatgcacttataccatggtctgggtgaatactcgattctgattggctgcagggtgtccattaaaaagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809099.1 True 1814 mRNA 0.46 2 4125627 4127757

Neighbor

gene id symbol gene type direction distance location
slc7a10b LOC103357197,LOC102205281 coding downstream 65385 4019094 ~ 4060242 (-)
dus2 dus2 coding downstream 115345 3981710 ~ 4010282 (-)
LOC120564132 NA coding downstream 155841 3911044 ~ 3969786 (-)
lrrn3a lrrn3,LOC104963257 coding downstream 300036 3799577 ~ 3825591 (-)
znf277 znf277 coding downstream 494812 3610411 ~ 3630815 (-)
prr33 NA coding upstream 490569 4618326 ~ 4629983 (-)
LOC120564256 myod1,LOC104930627 coding upstream 540725 4668482 ~ 4677370 (-)
zgc:172145 NA coding upstream 553593 4681350 ~ 4690529 (-)
LOC120564251 LOC103357242 coding upstream 784536 4912293 ~ 4925306 (-)
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding upstream 856923 4984680 ~ 5004204 (-)
G82229 NA non-coding downstream 68328 4056974 ~ 4057299 (-)
G82225 NA non-coding downstream 82772 4033244 ~ 4042855 (-)
G82210 NA non-coding downstream 117198 3980005 ~ 4008429 (-)
G82220 NA non-coding downstream 125990 3997225 ~ 3999637 (-)
G82213 NA non-coding downstream 151989 3973186 ~ 3973638 (-)
G82233 NA non-coding upstream 9519 4137276 ~ 4229086 (-)
G82232 NA non-coding upstream 22522 4150279 ~ 4152067 (-)
LOC120564271 NA non-coding upstream 62298 4190055 ~ 4191181 (-)
G82280 NA non-coding upstream 134378 4262135 ~ 4316293 (-)
G82281 NA non-coding upstream 140117 4267874 ~ 4355562 (-)
G82147 NA other downstream 547243 3494391 ~ 3578384 (-)
G82122 NA other downstream 745099 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 1057706 3056539 ~ 3067921 (-)
G81832 NA other downstream 1187637 2937752 ~ 2937990 (-)
LOC120563733 NA other downstream 1306214 2752238 ~ 2819413 (-)
G82246 NA other upstream 149063 4276820 ~ 4278359 (-)
urahb NA other upstream 876635 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 1349467 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 3046265 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 3160138 7287895 ~ 7291427 (-)

Expression


Co-expression Network