LOC120564251 (LOC103357242)


Basic Information

Item Value
gene id LOC120564251
gene name LOC103357242
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 4912293 ~ 4925306 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809100.1
GTATTAGCGTCTGTATAGTTCGGTACAGTCCTGGAAAGAAATACTAgacattacatatatatactacTCTCTCATccaaagtctctctctctctctctctctctctctctctctccctctctctctctctccctctctctctccattcagAGCTCAGCCTGCAGCTGCAACACTCTGCTGTTACTATTTCTGTCAAACTGCTTTAATGCACATTACACGCTCAGTACAACACATttactctctctcttacacacacacacacacacacaccattagcAGCAGCATGTAGCTTCCctagctctctctttctctctctctcttaaacacacacagaagctgGCTCGGCCTCAGTCGGGCGGCTGGGTGTGCGTCGGACGGAGCTCAGAGACCACGGGACAGAGCTGAGGATAGCAGCGATGTggacgaagaggaggaagacgacGACGTTGAATCCGGAGTAAAACTCCTAATCCAGCTTCTGGTTTCTGGTTTCAACAGACGCTTTGAGATTCTGGGTTTCGACGAGGAATCGAAGCTGctggcattttttttgttttttgttttaaatccgAGACCAGTTTCTGTCCTTCGAAGACAAAGTCTGGTTTCTGGGCTTTTCAGATTTGTTTTTAGGTTTTTATCTTCTCTTCTGAACGCTGCAGATGAAGCAGAAGAACagtttctgtcttctttctctgtttGGAGGCTGAAGCAGCAGAGCCGATGGACGCTGTCCACAGCTGGAcgttggtgtgaactggcagagTGCGGAGACAGCTGGATGAGAGTCTGAAGTTACAGTAGAGTCAATGTGACAGACATGAAGAACCCAGACCAGTATGGAGGAAGTCACCTGGAGAGTCTGGCGTGTGCAGCGCTGTCCAGTCTGGTGTTGGTTCTCCTGGGACTGCTGGGCTCGGTCCACGGCTGTCCTGGTGTCTGCACATGCTACGGTAACACCACGGACTGCTCCGCTGTGGGccttctctctctgaagtcCATCCTGGGACTGCTGGACCAGGACTCTCTGATCCTCCGCCTACCCCACAACAACCTTTCGTCCCTGGGCACGGCCGACCTGTCCAACCTCAGCAGCCTGGACCTCCTGGATCTCTCCCAGAATCACTTTTCCACCCTGCAGCCCGGGGCTTTCTCGGGCCTGAGCGGCCTGCGATGCCTCAATCTCTCTGCCAACTACCTCGGGGTTCGCCTGGTGACCCCTGACCCCAACAACGGCACAGAAGTCCTCCAGGATGGAAGTCAAGGGAGCGTTGGCCTGAGCAGGGACGTTTTCAGGGGGCTGTGGCGGCTGCGGGGGCTCGACCTGTCCTCCAACGGCCTCCTGTGGCTGCCAAAAGGCATGCTGGACGGGCTGCAGAGACTCGCCTGGCTGTCCTTGGCCAGCAACCGGCTGGCGGCCCTGGACAGAGTCACCTTCGAGCCCCTGGTGGGACTACAGCAGCTCCGCCTGGCGGGAAACCCCTGGGAGTGCGACTGCAAGCTGAGAGACTTCAAGCACTGGATGGAGTGGATGATTTACAGGGATGGGCAGGTAGATGCGATGCAGTGCAGTCTCCCGGGGGATCTGAAGGGCAGGGACATCCGCAGCGTGCCAGCAGAGATGTTCAGCTACTGCCTGCCGACTGTGACCAAAGAGGGCGCGCCGGGCTACGCCACGCGGCCTCCGTGCCCGCCCGGCCGCATCAGCAGCAACGACGAGTGCATCCGCCAGCGCTACCGGCCCGTCAGCGTCCGCCGAGCGCACGGCACGCAAATAGTCGCGGGCGTGATTTGCGGCACGGTGTGCGTCATGATGGTGGTCGCGGCGACGTACGGCTGCGTCTATGCCTCCCTGATGGCGCGCTACCAGAGGGAGATGAACAGCCGCGGGCAGCCGCTGATGGCCGAGTCCGGAGGAGACACGGACCTGGAGGACGGGGAGGTGTCATCGCCGACGTCTCCGCAGGAGTCGCCGCCCAAAGAGGGCTGCGGCATCGTGCACGGGTATCGAATCAGCAGCTTCTGACACGAGCTTTCGCATCCATCCAGGACGCCCTGGCTGCTTCTGCTCCTCAGCTCTCATCGGTGATGAGACGACATCCGCGGGGAGAAGCCCTGCAGCTCTGTGATTGTGCTGAGAAGCCTC

Function

NR:

description
PREDICTED: leucine-rich repeat and transmembrane domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809100.1 True 2146 mRNA 0.58 4 4912293 4925306

Neighbor

gene id symbol gene type direction distance location
zgc:172145 NA coding downstream 221764 4681350 ~ 4690529 (-)
LOC120564256 myod1,LOC104930627 coding downstream 234923 4668482 ~ 4677370 (-)
prr33 NA coding downstream 282310 4618326 ~ 4629983 (-)
LOC120564250 NA coding downstream 784536 4125627 ~ 4127757 (-)
slc7a10b LOC103357197,LOC102205281 coding downstream 852051 4019094 ~ 4060242 (-)
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding upstream 59374 4984680 ~ 5004204 (-)
LOC120564005 NA coding upstream 243180 5168486 ~ 5222677 (-)
rfwd3 rfwd3 coding upstream 306238 5231544 ~ 5258261 (-)
LOC120564558 NA coding upstream 338163 5263469 ~ 5283349 (-)
LOC120564561 NA coding upstream 367474 5292780 ~ 5307882 (-)
G82572 NA non-coding downstream 52353 4859256 ~ 4859940 (-)
G82560 NA non-coding downstream 123830 4788259 ~ 4788463 (-)
G82554 NA non-coding downstream 146624 4758149 ~ 4765669 (-)
G82378 NA non-coding downstream 202813 4709143 ~ 4709480 (-)
G82377 NA non-coding downstream 205690 4706279 ~ 4706603 (-)
G82593 NA non-coding upstream 87487 5012793 ~ 5013762 (-)
G82592 NA non-coding upstream 89084 5014390 ~ 5047680 (-)
G82595 NA non-coding upstream 162156 5087462 ~ 5087728 (-)
G82599 NA non-coding upstream 205469 5130775 ~ 5131097 (-)
G82600 NA non-coding upstream 205890 5131196 ~ 5132217 (-)
G82246 NA other downstream 633934 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 744507 4076378 ~ 4167786 (-)
G82147 NA other downstream 1333909 3494391 ~ 3578384 (-)
G82122 NA other downstream 1531765 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 1844372 3056539 ~ 3067921 (-)
urahb NA other upstream 79086 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 551918 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 2248716 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 2362589 7287895 ~ 7291427 (-)
met met other upstream 2813608 7738914 ~ 7832871 (-)

Expression


Co-expression Network