tango6 (tango6)


Basic Information

Item Value
gene id tango6
gene name tango6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 29024277 ~ 29067687 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809140.1
ATTTCAGCGCCATTTTGAGATGTTTTTAGCatgtagctagcgttagcactgCCACAGCATGACCAGCATGACCAGAAACAAGTGCTGAAAACGTATCCAGATTTGTACATGACTGTGAAGTTAGTTGTCTATGTGATGGCGAGATGACTCTAGCTATCATCTCAGCGATAAATATCCTTACAAAACCTCTTGGTGAGGCGTCTGTGCAAGATGCTCAGTCCTCACCCCAAGAGGCTCTCCTGGCAGTGCTTCGGGCCAACACAGCCCTCCTCCAGGAgcagctacagagtgagagcAGCTTCGAGGAGGTGAGGAGgttgagggaggaggagatggcgGCGGCAGACTGGTTCTCCAGCGATACAGAAGACGCCACGTGGTGCTTTGTCCAGGAGTGTCTCCTACTGCTCCTCACCTTGGCACGACACCTGTCCGTTGAACTCGAACGTTTCAAGCAGAACCCCGCTCCATCTGCAGCTAAACAACGCACCCCTGAGGCAGCTCCACCTTTACCTCCTGATGTCCTCAGTGTCACCCAGCAGAAGACGCTTGTAGCAGCTCTTCAGTTTGTGGTTTCTCTGGGGCTCTGCCCATACTTGGCCCCTGGAGTGGGTGTGTCGCTGGGTCGCAGGTCAGCATTTGGATCCATGGTAGAAAAACTTGTCCGCAGTGGGCCGGTGCCAGCACTGGGACGCCGCCTTCTTACCACCACGAATGTCCTATTGCAGTTGGCGGAGCTGTCATCCCTCGCCACATTGGTTTACACACGGCATCTGGGGGATGTGATGGCAGCACTGTGCCAGCTTGGCTACCAGCCAAACCGGGCAGAGAGAAGCGGCACAGAAGAGGAGAAGATACAGGAGCTCAGTGCTGAGGAACGTCAAACTTGCAAGAAGGCCCTCGGAGGCCTTTTAGGAAAAGTCTACCAGCCAATCGTTATCAAGGAGCTGCTGATCCTCCAAGGTGGACCCAAACAGTCTGCTGCAGTGGGAAGCTCCAGCGGTTCCAGCAGCGGGGCAGCTCTGGGATCAGCTCCCACCTGGCTGAGGCGTCTGTGTGGTCAGCTGCTGTCTGAGCGCCTGATGCAGCCTAACGGTGTCCAGGCTGTAGTCAGAGCCATCTTGGAGGGAGGAACAGGGGGCGACTCAGACTGGAGGAAATGTGACGGTGTGGCCAGGATCCTGGTGACCTGCCCGCAACAGTCTGCCTCAGCAGACAACTACTACAGACAAgtctgtcatcagATCCTTGACCTCCTGCACTTCAGGGACAAGCTGACAGCCCAGCAGTTTCAGCGTGTGGCCACCAGGGCGGTGCTCTTCACGGTGCAGGAGAAGCCCAGCTTTGCCCAGCAGTATTTGCTCACTCCTCTGCTCACACCTCTCCACCGCTGTACCACTGCTTCCAATGAGGGGCATTTCCAAGCTGCTGTGGAGGAGTGGGAGCTGACACGTTGTGTGAATGATGTATATAAGATCTGGGTGGTTGGAAACAGTCCGTCAGCTTCTCTTCTCAAAGCCCTAGAACAAGTTCTTCCTGTTATCTTCACACTCTTCTGTTTCACCAAGCAGAATGTCTCCCATCTACGTGAAGAGGACGATGCTCTGTATGAGAAGCTGTCAGGAGAGCAGTGGAGGCTGGAGTGTCTGATGCAGCTGCTGGCTGAACTCAAAGACTCTGACCTGCCCGGAGACTTCTTCCTGGACCTGCTGGAGGAGCTGGCCAGCTGGGCAGCTGCAGCAGACGAAGAGAAGAAAGATGAGCAGGAGTTGGACGTGTCAGCCATGACACTCCTGGAGGTGGAGCAGCAGCTGTTGGGCCCAGCTGCGAGGCAGGGCCAGAGACTCTCTTTGCTTCAGGTGTTGGCTATGATGGTTGAGTCCGTGCAGCATACTGTGCTGCTGAGAAAAACCTCACAGGTGGTGGACTTCATGGTGTCCCTGCTTAAAAGGGCCTGTGTGGGTCTGGATCCGGCCACTGGTCCAAATCGTGGGAACCCCGTAGAGAGCCAGACGCTGAGCATGGGGATGGGCGTAGTGGCCACTCTGCTGTCTGGACCTCAGCTTAGTGCAGAGGACTACTCTTCAATGGCAAGACTGCTCCCACCACTGGAGACGCTGTCTCAGAAGCACCCCGAGGTGGTCATCCAGGAGTTGGCATCCAACCTCAGAGCTATCATTGCCACTCACGGTGCCTACTGGCCTGAAAACCTCACCGATGTTGCTCAGCCCTCCAGAAACCCAGAAACGACAGCAATGAACAACAGTGTGCCTTTTGGGAAAAAACAAACCACGCAAACTGAAACAAGCGACACACAGACTAGTCCTCATTCATCTCCCCCGGACAGTAATTCACCTAGCAACACCCACATCAGACACCCAGCCTCCTCTGGAAGGTCTGCAGCAGGAAAAAGTCCAAAAGGGGGAGGAAGGACCTCTAGTACCAGTAACCTTTGCCCTCCTACTAAGCccttttctgattggctgctagAAGCATGTGACCCGGACGTGCCGACCAGAGCGTTCGCCCTTAGGGTCCTGACCCAGATGATGCGAAAGGAAAACCCAGAGGCTGTCCAGGCACAGGAGAAAGTCCTCATGCTCTTCTTAGAAAACCTGGAGCATGAAGACTCCTTCATCTACCTGTCAGCCATTCAAGGTCTGGCTGCACTGGCTGATTCCTACCCAGAGAGGATTCTGGAAAGGCTCCTAAAAGACTTTCAACATGGTCCCTCCCTCCCTACATCCAACAAGGAGCACTCCCTGGAAACCCGCCTGAAAGTGGGAGAAGTCCTGATGAGGGCGAGCAGGGCTATGGGGGAACTTGCGCCCCACCTTGGCCGTCCTCTAGTCGGCGTCTTCCTGCAAGGAACCAGGGACCCTGACCAAAGCGTCCGAGCCAGCAGTCTGTCCAACCTGGGGGAACTTTGCCAGAGACTGGACTATGCCCTAGGAACAGTGGCTCAAGAGctCAGCTCCTGTCTGACTGCTCTGATAAAGACAGAGAAGGAAGCAGAGGTAAGGAGAGCTGCTGTCCATGTTATCACCCTGCTGCTCCGAGGCCTCAGTGGAAAAACCACCCAGGTTCTCAGTGATGTGTTGTTGGACCTGTACCGAGCTCTAAAGTGGGTGGTTCGCTCAGACCCGGATGATGTTGCAGTGCTCCATGCCCAGCTGGCTCTGGAGGAGCTTGATGACGTCATGAGGAGGTTCATCTTCCCTGAGCAGAAGCTGGAGAAGAAGATTGTTGTTCTGCCATAGAGCTCACATTTTATTTCCATAGGGTTTTAACCCCTCCATAGTTTGGACTGATAGAGGACTTTATTTTTATATGCTCGACTTATAGGCAGCACTAGTTCTGCCTCCATGTGATGTGGATTTTATGGTCAGGCCACCCGTCTGTAACAGCAGCAGCTAAGTCTTGCATGCCTGCATACCAAGTCTTTCCTTTAAGAAAAGTTACAGTGACCCTATACCATCGTGTTCTAATGTACTACCAACAGTCCACTTCcaaaataaagttttaaaaacaTA

Function

symbol description
tango6 Predicted to be involved in protein secretion. Orthologous to human TANGO6 (transport and golgi organization 6 homolog).

NR:

description
transport and Golgi organization protein 6 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809140.1 True 3533 mRNA 0.54 17 29024277 29067687

Neighbor

gene id symbol gene type direction distance location
has3 has3 coding downstream 5528 28988955 ~ 29018749 (-)
utp4 utp4 coding downstream 49488 28959390 ~ 28974789 (-)
cracr2aa LOC103365762 coding downstream 481026 28519058 ~ 28543251 (-)
tspan33b LOC104940279,LOC100694777,LOC101482493,LOC106573176,LOC105926564 coding downstream 831617 28176802 ~ 28192660 (-)
tbxas1 tbxas1 coding downstream 1213197 27799006 ~ 27811080 (-)
c8h11orf49 LOC104936424,LOC102313439 coding upstream 218029 29285716 ~ 29295960 (-)
LOC120564361 LOC103374757 coding upstream 287627 29355314 ~ 29363745 (-)
dnaaf4 NA coding upstream 340473 29408160 ~ 29431798 (-)
LOC120563826 LOC107090429,LOC106527956 coding upstream 498615 29566302 ~ 29710212 (-)
rep15 rep15 coding upstream 775789 29843476 ~ 29844910 (-)
G88625 zc3h18,LOC102790709 non-coding downstream 84048 28857471 ~ 28940229 (-)
G88636 NA non-coding downstream 134593 28888004 ~ 28889684 (-)
G88613 NA non-coding downstream 231293 28792712 ~ 28792984 (-)
G88596 NA non-coding downstream 500860 28518156 ~ 28523417 (-)
G88513 NA non-coding downstream 1041983 27975965 ~ 27982294 (-)
G88706 NA non-coding upstream 23343 29091030 ~ 29093595 (-)
G88709 NA non-coding upstream 30582 29098269 ~ 29098610 (-)
G88711 NA non-coding upstream 35701 29103388 ~ 29103736 (-)
G88712 NA non-coding upstream 36268 29103955 ~ 29106814 (-)
G88715 NA non-coding upstream 68526 29136213 ~ 29136422 (-)
tspan9a tspan9,LOC103365760,LOC106534164,LOC101481610,LOC108237543 other downstream 641562 28139286 ~ 28382715 (-)
LOC120564781 NA other downstream 1199316 27812245 ~ 27824961 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other downstream 1374215 27623990 ~ 27650062 (-)
G88379 panx2 other downstream 1668501 27354972 ~ 27355776 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other downstream 1794905 27223962 ~ 27229372 (-)
G89085 NA other upstream 1654421 30722108 ~ 30722503 (-)
G89241 NA other upstream 2175481 31243168 ~ 31268469 (-)
G89365 NA other upstream 3038936 32106623 ~ 32108066 (-)
fa2h fa2h,LOC106937201,LOC102797665,LOC107674969,LOC107707436,LOC107589178,LOC104955910,LOC107714073 other upstream 3719111 32786798 ~ 32851495 (-)
znf319b znf319,LOC102797175 other upstream 3838318 32906005 ~ 32913030 (-)

Expression


Co-expression Network