LOC120564320


Basic Information

Item Value
gene id LOC120564320
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 1816911 ~ 1820520 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809170.1
cctgtactgtatgactCACCTGACAAACAGTGTAATGAACTGAACTGAGACAAACCAGGAAACCGGTTTTTATTGTGCCTCTCTGAgacgacgcacacacacacacacagggagagaccGACGATAAGATTCACTTTCAGACCATAACCACCACATCCATTGAGAGAGGACATCTACAGGAGGGATTACTGGGAATACTGGAAAACCAGCTGCTGAATCCACAAACCGAATGAGAGTTTTACAGGGAATTATAACTTTCAGGAAACGGAGTGACTGAGCTGTCGGCCTGCTGTGTTTCCTGCTTCACTCAGAGACAAAATGGCTTCCAGATTAGAGAAAGATCTCAGCTGTCCGATCTGCCATGAAGTCTTTAAAGATCCTGTTGTTCTGTCATGTACCCACAACTTCTGTAAAGACTGTCTGCAGGGctggtggagagagaaagaagcacGTGAGTGTCCAGTTTGTAATGCAATATCTTCAAAGTCAAAACCACCTTTAAACCGGTTGTTAAAGAACCTGTGTGAGAGTTTCTTAGAGGAGAGAGATCCGAGAGCTTCAGAGGCTCGctgcagtctgcactctgagaaactcaaactcttctgtctggaccatGAGCAGCCAGTGTGTGTCGTCTGCAGAGATTCAGAAACACACTCCAACCACAGATTCAGACCCATCGGTGAAGCTGCAAAACAATGCAAGAAGGAACTTCAGGAAACTCTGGAGCCCGTAAAGAGAAGGCTACAGAGTTTTGAACAAGTTAAAGTGAAGTTTGATCAAACTGCAAAACACATAAATGTCCAGGCCCGACGCACAGAGATGCAGATTAAGCATCAGTTTAAGAAGCTTCACCAGTTTCTAGAAAAGGAAGAGGAGGCCAGGGTGGCTgcactgagggaggaagagaagcagaagagtcagaggatgaaggagaagatggaggctctgaacagagagatagcagctctttcagacacagtcagagacacagaggagcagctgagagctgaagacgtctcattcctgatcaactacaagactgcagtggaaagagtccagcagCGCCCCCTACTGgatgatccacagctgctcccaggagctctgatagatgaggccaaacacctgggcaacctgagcttcaacatctggaacaaaatGAAGGACATGGTCTCCTACTCCCCTCTGgttctggacccaaacactgctgGTAAATATCTCATCCTGTCTGAAGATCTGACCAGTGTTAAACTTGGAGAGAAACAGCAGCTTCCTGATAACCCAGAGAGGATTGATAATCACTTCTCAgtcctgggctctgagggctttCACTCAGGGACCCACAGCTGGGATGTCGAGGTGGGAGACAGTGAACGCTGGGACCtgggtgtgttagcagagtctgTCCAGAGGAATAGCGTCATAGTGTCTGGATtatggacaataaagttatgtGAAACTAAATACTCAGCTGCCTCCACATCACATCCACCCACTGATCTCATATTGCAGACGAAGCCCCAGAGGATCCGAGTGACTCTGGACTGTAACAGAGGAAAGCTGTCGTTCTCTGATCCTGATAcgaacatgcacatacacaccttcacacacactttcactaaAGGGATGTTTCCATATATAAGCACTGTAAATGTTCTCCCAATGAAGGTTGTACCAGCGAAGGTCTCTGTGACTATAGAACAAAAGAAACAGATAGTGCTCATGGTGATGATGGTTATGGTGGTGACGGTGATGGCGATGACGATGCTGCTGATTCTCTTTGGGTAACATGTCACCATGTTGTCCTGATGTTgctggtaaaaaaataatatatattcatCTGGATATGGTAGGACACAGATTATCTGCAAACTATCTCTAGGCAACTAAAATGTTTCAGTTAACTTtgctgaagtgaaaacacacagttagAGGGTCAAAGTGTGAGATGAAAAACACGGACAACAGCCAAGAACAAgttgaggtctattttaatgtccacggtgttagcatggttaccatcgctaagcctctgtccttaTTGGTCCTATAGCTTCCCCTGCGTTATCTATTTATCATCTGCTTTAGAAGATGGGACCATCATTTACTAAAggaacatcatgctgtgttgaagaTGACTGGAAACTagtgattgagaccataaactcattatgaaaaggTTTACTGAAGTAATAAATCAAGAGAGAAGTAGAGaagctcattttctcatagactgcagaaacagacttctttttggagccggtggagtctccccctgctggaagttagagagaatgcagctttaaggagcttcagcaatggcttcacttttcagacccggaAGCTTTGTTCATTATTTTAACATTCTAACATCTATTAGTCAAAGATGTTAAAACAACAGATACATTTATatgttaacaattatttaaattattataaacTAACAAAAATCAGAGGAAAGTTTTCGTTCATATCAAAATCAATTCTTGTTAACATTTAttgagtttataaaatacaaatatattcagttatACTTAAATTcctttaaatggttttaaattgAACTTGGAGCAGAAACCAGGtttacggctgtgtttacaCAACTTATTGACGTAACATCATCAGAATGAATCACTCGTGTTTCTGTATTACTTATTAAGACTTGTCAATGAGCTTGTGATTGTGGTGGTGGGAGGGGCTACCCTTTGGTTTAACATTAGATCATTGATTATATTTTTGAagttaagtttgtgtgtgtgtgtgggggggggggggggggctggagAGCATCCTCCTTGCTAATTGAAAAAAAGACACCCATCTGTATGTTGACTGTGTGAAGTTTGATGAATCAGACGAATACAGTAAGTTCATTTttgttgtgcttttattttggtaaccctgagatctctctctctctgagggaGTGTTTTCATGGAGTGAAcactaatgctgcgttccagacacaatttttagtcCGTAAGTTacaacttcaagtcacgactcacgacttggtagcatAAACACAACCTATTTCTcttttctatttctcaccgttaatcaccggTGCCTTTACAGCATCAAcatcgccattgttgtttatgtgtgtgttatgtcaaaaactgtaaccGGGAGTACAACCATCTAGTACGAGTTCACGGGTAGTAAGTTATGGtctgactgccgttccagggcactttcacgggtagaaggttgtgaaaacacgggttacgggttgcctgTAACGCAGCATAAAATTGACCTTGTTTGGCTGAACCAAGTAGtcagaaaaagagaggggggagtGGGTAGAGTTAGATTTAAAGGTTGGCTTTTGTGTGGTGATTCTTCAGTTTATTTAGTCTGTATGGTGTTATAGTCATTTGTATTCTGTATATGAGAAATATTGGTGAGGTTAAATTGtcagtatatattttaaagttattgtgttattgtttCAGTGCTCCTCGCTATATAATAGTGTTGGTGGAGAGCGTAAGTATGTATGCTTCTGCTGTCCATCAGCCTTATACATGTTTGGGGAGAGTTTTGGAACTTTGTGCAACTTGTTTATGGTCACGAATAAAAATCAGAGCTCTGGGGAAAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809170.1 True 3610 mRNA 0.43 1 1816911 1820520

Neighbor

gene id symbol gene type direction distance location
LOC120564319 NA coding downstream 22159 1791630 ~ 1794752 (-)
chrm4b NA coding downstream 113497 1691369 ~ 1703414 (-)
LOC120563569 NA coding downstream 364631 1443627 ~ 1452280 (-)
zgc:101783 NA coding downstream 552857 1249797 ~ 1264054 (-)
sycp3 sycp3 coding downstream 613539 1195923 ~ 1203372 (-)
LOC120564321 NA coding upstream 3570 1824090 ~ 1826931 (-)
rpgrip1l NA coding upstream 45148 1865668 ~ 1905302 (-)
LOC120563719 NA coding upstream 115568 1936088 ~ 1980407 (-)
LOC120563551 NA coding upstream 194776 2015296 ~ 2019324 (-)
LOC120563554 NA coding upstream 200484 2021004 ~ 2028583 (-)
G81592 NA non-coding downstream 99665 1708041 ~ 1717246 (-)
G81581 NA non-coding downstream 100320 1640720 ~ 1716591 (-)
G81586 NA non-coding downstream 133930 1680821 ~ 1682981 (-)
G81580 NA non-coding downstream 175717 1640631 ~ 1641194 (-)
G81569 NA non-coding downstream 247456 1535338 ~ 1569455 (-)
G81609 NA non-coding upstream 41979 1862499 ~ 1862980 (-)
G81627 NA non-coding upstream 114467 1934987 ~ 1935976 (-)
G81643 NA non-coding upstream 219089 2039609 ~ 2040563 (-)
G81651 NA non-coding upstream 286454 2106974 ~ 2168454 (-)
G81652 NA non-coding upstream 286579 2107099 ~ 2107676 (-)
ambra1b ambra1 other downstream 48001 1246936 ~ 1768910 (-)
G81576 NA other downstream 152019 1613394 ~ 1664892 (-)
trnae-uuc_58 NA other downstream 256186 1560654 ~ 1560725 (-)
trnae-uuc_57 NA other downstream 256822 1560018 ~ 1560089 (-)
kcnj11l LOC103374924,LOC108251025,LOC106531031,LOC103466804,LOC106904500,LOC103148617,LOC102236473,LOC100711429,LOC101469628,LOC102296518,LOC102199411 other downstream 268727 1538139 ~ 1548184 (-)
G81655 NA other upstream 290101 2110621 ~ 2112849 (-)
G81726 LOC106531021,LOC102237407,LOC103130839,LOC107099816,LOC101479225,LOC103365994,LOC107389108,LOC106938894,LOC106907116,LOC103466381,LOC101173933 other upstream 849795 2670315 ~ 2678513 (-)
G81738 NA other upstream 864378 2684898 ~ 2685240 (-)
LOC120563733 NA other upstream 931718 2752238 ~ 2819413 (-)
G81832 NA other upstream 1117232 2937752 ~ 2937990 (-)

Expression


Co-expression Network