LOC120564329 (tp53i11)


Basic Information

Item Value
gene id LOC120564329
gene name tp53i11
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 20016169 ~ 20059123 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809180.1
TGCTGCTCCGGGGTTTGTGAAAGCACGGAGCGCTGTGATCAGGCTGTGATGAGCCTGCACACTATCTAAACTGCTTCCTCACTGCAACAACGGCTAACGTTACTCTCTGAAGCAAAATCTGGAGACCCCTCCGCTTCCCGCTGTATAGGACCTTTTTAGAGGACATTTGGAAGAGCggagcagtggcagcagcagcaacagcatcATCTTCTTCAACTGGGTTAGGGGCAAAGGACGAACTCCACATCTAATAGTATCTGTATTCAGTGTGTGCGCACCATGGCGTCTAAACCTCACCCTCCTCTGATGAAGAAGCATAGCCAGACAGACCTGATAAGCCGCCTGAAGAGCAGGAAGATCCTTGGAGTCGGCGGCGAGGATGATGATGGCGAAGTGCACCGCTCAAAGATCAGTCAGATGCTCGGAAATGAGATGAAGTTTGCAGTGCGAGAGCCTATCGGGCTGAGGGTATGGATACTCATCTCTGCAGTGGGTTTCACAGTTATGGCCGTGATGGCCCTCGTGTTTCCCAACCAGCTATATGAGGTTGTTTTTGAGGAAGAGCTCTCCACGACTAGCATTTCCATTCGCCTTTATGGAGGAGCACTGCTTAGCCTGGCCCTCATCATGTGGAATGGTCTCTACACAGCAGAAAAGATCGTCATCCAGTGGACTCTGCTCAGTGAAGCCTGCTACTTTGCTGTTCAGTTTCTTGTGACGTCCATCACCTTAATGGAGATCGGCATCCTGCCCAATGCTGCCATGCTCCTGCTCCTCAGTCGGGTGCTCTTCCTGGTGGTCACAATGTCCTACTACTACCACCTGGGCCGTAAGCTGAAGAAGATCTGAGCTGACTGGTTGATACTTCCAGGGAGGGGACAGCTGAGCACAGATCACAAACAAGGGCTCAGACGGTTTGGAAAAGTATTTGATTGGGGCTTGGTTGGAGCATTACTCTGCCAGTGGATGCCCCCTGCCCCCTTCCATAGGACCTAGCCTATTGTAACCCCCAGTATTCGACAGATGAGCCCAGTCTCACATTCCAGACTCTATAACTAGAATGAAAAACCTCATAGTGAAAGTGAATTACTCTGTCACTGGGCTGTGAGTTCAAGACCCTCTTGacacaactttttttcttttgcagttCTGAGTGCTGTAATTACAAAGAAGGAAATAGCAGTTTGTAGTGCATTGCGTTCTTTTGTCTCATAGTTATGATTTAATTTGTACAGTACATCTGACTAAGTTGTTCATGTATAGCCACGTGATTTCCAGAATCAGTATTTAGTGTTATCTAAAGTTGCATCTTGACACCGCTTCTTAATCACGCTCAAGGACCAAAAGTTTGTGCTCTAATTTGTTTCCTGTTTGATGCTATCGATGTTAAGTGCAGCCTGAATACATGTGCTCTTGCATGCTT
>XM_039809181.1
TTGCTGCTCCGGGGTTTGTGAAAGCACGGAGCGCTGTGATCAGGCTGTGATGAGCCTGCACACTATCTAAACTGCTTCCTCACTGCAACAACGGCTAACGTTACTCTCTGAAGCAAAATCTGGAGACCCCTCCGCTTCCCGCTGTGTGTGCGCACCATGGCGTCTAAACCTCACCCTCCTCTGATGAAGAAGCATAGCCAGACAGACCTGATAAGCCGCCTGAAGAGCAGGAAGATCCTTGGAGTCGGCGGCGAGGATGATGATGGCGAAGTGCACCGCTCAAAGATCAGTCAGATGCTCGGAAATGAGATGAAGTTTGCAGTGCGAGAGCCTATCGGGCTGAGGGTATGGATACTCATCTCTGCAGTGGGTTTCACAGTTATGGCCGTGATGGCCCTCGTGTTTCCCAACCAGCTATATGAGGTTGTTTTTGAGGAAGAGCTCTCCACGACTAGCATTTCCATTCGCCTTTATGGAGGAGCACTGCTTAGCCTGGCCCTCATCATGTGGAATGGTCTCTACACAGCAGAAAAGATCGTCATCCAGTGGACTCTGCTCAGTGAAGCCTGCTACTTTGCTGTTCAGTTTCTTGTGACGTCCATCACCTTAATGGAGATCGGCATCCTGCCCAATGCTGCCATGCTCCTGCTCCTCAGTCGGGTGCTCTTCCTGGTGGTCACAATGTCCTACTACTACCACCTGGGCCGTAAGCTGAAGAAGATCTGA

Function

symbol description
tp53i11 Predicted to be involved in negative regulation of cell population proliferation. Predicted to be integral component of membrane.

NR:

description
PREDICTED: tumor protein p53-inducible protein 11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809180.1 True 1423 mRNA 0.48 8 20016169 20059122
XM_039809181.1 False 726 mRNA 0.53 7 20016743 20059123

Neighbor

gene id symbol gene type direction distance location
cd82b LOC103355222 coding downstream 3859 19987783 ~ 20012310 (-)
tspan18b tspan18 coding downstream 61354 19885911 ~ 19954815 (-)
caprin1b caprin1 coding downstream 203296 19799132 ~ 19812873 (-)
nat10 nat10 coding downstream 218031 19788711 ~ 19798138 (-)
LOC120563329 NA coding downstream 254259 19753404 ~ 19761910 (-)
si:dkey-29p10.4 NA coding upstream 16368 20075491 ~ 20083600 (-)
LOC120564471 LOC104960979,LOC103355225,LOC103150264,LOC103466396,LOC106915861 coding upstream 29005 20088128 ~ 20115384 (-)
bncr NA coding upstream 193676 20252799 ~ 20255338 (-)
LOC120563520 NA coding upstream 196243 20255366 ~ 20256420 (-)
LOC120563522 NA coding upstream 197321 20256444 ~ 20257777 (-)
G86605 NA non-coding downstream 357 20014338 ~ 20015812 (-)
G86575 lmo2 non-coding downstream 192796 19821540 ~ 19823373 (-)
G86566 NA non-coding downstream 239126 19774307 ~ 19777043 (-)
G86549 NA non-coding downstream 290976 19723973 ~ 19725193 (-)
G86543 LOC104950121,LOC106908881,LOC103380454 non-coding downstream 320354 19694995 ~ 19695815 (-)
G86652 reln non-coding upstream 182310 20241433 ~ 20241850 (-)
G86660 NA non-coding upstream 191767 20250890 ~ 20264206 (-)
G86686 NA non-coding upstream 343621 20402744 ~ 20461823 (-)
G86761 NA non-coding upstream 639692 20698815 ~ 20699637 (-)
G86853 NA non-coding upstream 849266 20908389 ~ 20908590 (-)
cep152 cep152,LOC104960117 other downstream 442481 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 627594 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 698691 19315385 ~ 19317478 (-)
LOC120564082 svip other downstream 855682 19156758 ~ 19160487 (-)
G86194 tph1 other downstream 1005253 19007196 ~ 19010916 (-)
G86638 NA other upstream 193516 20252639 ~ 20259259 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 747759 20806882 ~ 20829235 (-)
LOC120563850 NA other upstream 818545 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 1310408 21369531 ~ 21372509 (-)
G87140 NA other upstream 1653919 21713042 ~ 21713554 (-)

Expression


Co-expression Network