LOC120564344 (LOC104940834,LOC103371551)


Basic Information

Item Value
gene id LOC120564344
gene name LOC104940834,LOC103371551
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 13167318 ~ 13187582 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809220.1
TGACCATCGCTGGATCCTCTGAGCTCCATCAGAGTCACACCGCGGATCACTGAGTGCAGGCAGGCGGTCCGACACAACCCAGCGCACGGATCAGAAAAGGAAGGACgagggtggggggggtgcaAAAATTTCGGATTAGACGCTTGAGCTATGAACATCCACAACGTTAAATAGAAGTTAACGGAGCTCTCACACCATAAACGCGTCGAGGATGAACGGGACTGCAGCGGCCACTGGATCGGCTTCTTGCCGTTTCGCCCActattttgttgtgtgtggaGTGGACACGGAGACGGGCCTGGAGCCGGACGATGGAGCAGgCGAGGGCTTTGAGCAGAGCCCCATTCGACGGTCGTTCAAGTCAAAGGTTTTGGTGCACTACCCCGAAAGCACAGACAGGAACCCCTTCAATAAAGATGCCGTCAACATGCTCTGCATGCCGAGGGGTCTTTCCTTCCGCACGCAAGCAGACAGGCTCGATCCTCAGTTTCACTCATTCACGATGTCTTTTGATGACGGTACACGTTCCTACGGCTTCGTCCACACCTTCTATGAGGAGGTGACCGGTGCTCAGATCATCACTGCCATGCAGACTCTCTACCAGATGCACCATGTGGAGCACCATTCAGCTTCATCtgtttcctctccctcttcctcatcttcGTCTGCGTCCTCGCCCTCCACCTCCAGCATGGACTCCCTTGTGAGCAGCTTGGATGAGTCCGACGCTGAGTCTCTGGCCGGGGTGTCCGCCTGCTTCGGCTGCGCAGGCTCCTTCGATCCAGCACGGGACACTCTGTACGTGTCCAAAGCCCTCTGCCTCCTTACGCCGCTCCCCTTTCTTCAAGCTGCTCGACAGTTTCTGTCTCAGCTTCACCAGGCCGTGACCTCACACACAGCCCCACCCCTCCCGATAGAGAGCTACATCCACAACATCCTGTACGAGGtgcctctgcctcctcctggcAGGTCACTGAGGTTCCACGGGGTGCAGGGACCCATTGTGTGCCAGCGGCCCGGGCCGGGTGAGCTTCCGCTGGGGGAGTACCCTCTTGGAGAGGCGTTCTCCCTGCTGGGTGTGGACAATATGGTGCAACTAATTACCTGTGTACTTCTGGAGACACAAGTCCTGCTTTGCTCTCAAGACTACCAGCGTTTGATGACAGTGGCAGAGGGCGTCACCACCTTGCTATTCCCATTCCAGTGGCAACACATCTACCTGCCCATTGTTTCTGCACCGCTACATCACCTCCTTGATGCTCCTGTGCCATTCTTGTTGGGTATCCAGCGCAGAGAGGGAGCTCAGCGATCCTCCCTCCACCTGCCACATGAGGCCAACCTGTGCTTTGTGGACATTGACAACCGCTGTGTCGAGGTCCCCGAGGACCTCCCCGTGTTTCCAGAACAGGCCGAGCTAATCCAGGAGCTGAGTGAGGTACTGCTGCGTTTCGGGCTCCCTCCACAGGGCGGTGTGATCACTAAGCCCGCCACCGCCTCCCCTCGCATGAGCAGCCTGGTGCTGGAGGATCTAATGGAGGACAGAAGGAACGGGAACCTCGGAGGCGAGGAGCTGGCGGTGCTGGAGAGGCTGCAGGCTCTGGCGCGGAGGTGCGGAGTGGAAAAGATGTCAGATGGAGGGAAGACGCTGGGACACGTGtttgaggaagaggaggaagagctgAAGGCTGCGAAGCTGAACGTTCAGCTGAGGGAAGTGTTTGCTGGACGTTTTGCTGCCATGTTTGGCAAGTATGAGGAGTTTGTCATCCACAGCGCTCTTGATTTGGACTCCTGGTTGAGCAACCGAGAGGGGACGTTCAGCTTTGACAAGGGTTCCTTCCTCTCAGTTCAGCCTGTGAGCCACTTGCACTTCTTGTCCCAGTTCCTGGAGACATCCATGTTTTCTTCCTTTGTGGATGGGAAGGTGATATCTCGCTGGGCGGATAGAGAGCCACTGCAGCAGCTTTTTGACAGCCGTTTGGAGAGAGAACGACTGtacgacacagacacagaggactCCCGTAACTGTCGCTACAGGAAATGCACCACGGTCTTTGAGTCAGCTCAGGTCATTGAGCGCAGACTGATGAAGGCTGACCACACAGCCATACACCCCCACCTGCTGGACATGAAGATCGGCCAGGGTCGTCATCAGCCGGGCTACTTCCCTAAGCTGCAGGCGGATGTGCTTGCACAGGGACAAAACACCAACAAgtGGTCCGGTCGTGTTACAGCATCGCGCAGGACTGACCTCAAGAGATCAACGGTGACTGAACACTCAGGAGTGGACAACGAACAGAGACAGAAGCACACATTTGCGAGGAAGAACCTCCGCCAGTCTAAGCTACTAGATCCGTCGCTTCGAGCTGTCACTCAGACTCACCGAGAGTTTGCTGAAGGGCTGCTGAGCGAATGTCGTCTGAAGACCAAACGGATGTTGATGGAGAGGATGGGGAAGGAAAGTGTGGAACTGGGTCAGGGAGAAGCCAACATCACAGGCCTGCAGGAAAACACGCTCATCCACGGTCTGTGTGACCTACTGGAGAGAACCTGGGGCCATGGTCTGCAGCTGAAACAGgGGAAGTCCGCTCTTTGGTCCCATCTGCTTCACTACCAGGCGGCCCGGGGGAAGACGGAGACACCAGCTGAGTCTCCAGGGTCTAGCGGATCGTTTGATGATGGCACTCTGCTCCTGAGAGGATCGTTAATACAGGATATGAGGTTTATCCAGACCATGAGTGAGGGTCTCTCTGAGGTGGGTCAGGCTCGGGCCTGGATCCATCTGGCTCTGGAGAAGAAAATGCTATCCCAGCACCTTAAAGAGCTGCTAACAAACCAGGAGCTGCTTAGGCAGCTGTATAAACCTCATGCATTCCTGCTCTGTGAAGAAGAAAGGGAGCAGTTTCTGTTCCACCTGCTCTCTCTCAACACTGTGGACTACCTCTGCTTCACGCGTGTCTTCACCTCCATCAGTATTCCATACCGTGTTGTTATAATACCAATGAAGAAGCTGAGCATTGCAATGGCAACAGTTGAcccttgggtgtgtgtgtcaggagaACTGGGTGATTCAGGAGTTAGACAGATCCCAAAGAATTCACAAGAGATCTTTTTCCAGTGCAAGAACCTGGGCAGGCTGAGCACTCTGCAGCTGGGACAGGAGAACTCTGGCTTGCTGGCTAAGTGTCTGATTGACTGTGTGATGGTGTATAATGAGATCACAGGACACACCTACAAGTTTCCATGCGGGCGATGGCTGGGGAAAGGCGTGGGCGACGGCAGTTTGGAAAGAGTTCTCATTGGTCAGCTGGTGTCACCTGGTGGAGAGGAGGATGCTGGAAGGTGGACAGGGACGCCTCCGGAGCTGGCCTCTCCTTCTCAGAGTGTGCGGGCAGTGCTCGGGTCGCTTGGCAGCCGAAGCAGAATGCTCTCTGTTGAAGTACAAGAGGACATGAGGGAGGCAGCAAATAACCTTGTTAAACACTTCCACAAACCCGAACAGGAGAGGGGCAACTTGACAGTCTTGTTATGTGGTGAAGGAGGTCTGGTGCTTTCCTTGGAGAAGTTCCTCCTGCACGGGTTCAAATCTAACCGTCTTTTCCAGAGGAATGTGTTTGTTTGGGACTTTGTGGAGAAGTCAGTGGTTTCCATGGAGACAGCTGATCAGATGGGTGACCTGCATGGATCAATATTGACGAGGGGTCCACCTTGCGATTTACTGTGCCACTACGTCAATGCCATCAATGCCTCGCCACGAAACTTTGGAAAAGAGGGAAAGTTCCAGCTGTTGGTCTGCTTGGGAATCCGGGACCGGCTACTCTCTCATTGGCTCCCCCTGCTGGCAGAGTGTCACCTGACAGCGCGGACGTACGAGGAAGGTGCTCTGCTGCGGGACCGAGCTGCCGTGCACTCCCTCTCCCGCATCCTGCACACACTCAATGAGTTTGCCATTACCCTGGAAACTGCACTGGTCAAAGGAGTTGACCTCTGACCGTGACAGATAAGCCCCTTCTCTGTAACCTAACACAGGAATGCAGATGTGTTaaaatattcatctttccaTTTGTGGGAAAAGGAAGTACATCCAGACACTTGAGATATGCGACTTTATCATAAAAGAGGACAGTGGACTGGATGAAGTCACTGGCAACTCGAGCTCCAAACATATTGCCTTGTTCCCTGATGTAAATGtcttacatactatactgtatttGCTTCAGGAAATAGTCTGATTTTTCCTATGCTTGTTGACACTGTGAAATCCATTTCCTCAAGGAGAAATAGAGAGTCATTCATTATCCCACATAGTAGATATTTTCACAGCTCCCACCATTAACTGTATCTGACCCTAGGACAACTATAACTATCCTACAACTGCTGTATTGCTTGCACTTGAACTTTAAACTAAGCACATGCATGGCCAAattctctttgtttgttttacgtCTTAGTGTGTTGTGATCTGAAACTTCAGGACTCAGGCCTTATTATACACATTTTTCTTGACTTCATTCATTGGATATCTTAATAAATATACTACAGAAAGATAATGTCCCCACCCTATGATATGTTACAAAATGTTACATTATTATGCTCTTGTTAATCTGTGTAACATCTTGCCTGTTTCTCATTGTTTGCTTTAGTTTGAGGTCACATACTGAAACTAAAACACTGAAACCAAACTAGTGTCCTAATTGTGTCAATTAAAATAGCCTTTGTCAGAAAACCTTTATTTTCCCCCTCTCTAATTGTAAATATTTTGCTTCATTAGACCTTTGATAGAATTGTGCCCATTTGTTATTATGATGTAATGAATTTGTGGCATATTTTTCTGTATAAAGGCatcttgtttgtgtctgtgtaaaaCAGTAGATTTCAATTATGGACACACTTTACTGATATGCTGTTTGTTTCTAAACTGTTCAGTTGTCTTCAGACAATGAATAGAGCACAGTTTCTTAAAAATGCTAGGTATTATGTTGATGTCACAATTCATTTAACAGTTGAAGAACTATGGAAATGCTGTCTCCTGCACTGTCCTGCAAGCACGATGTAACCCACAATGACCAAGCCTATATTATAATTTAAATACAGATTAGAGAAAGCAATAATGAATTGTTATTTATGAAATGTGTTGTCCAAAAGATTAAAGTTAATATTGACATAA

Function

NR:

description
PREDICTED: DENN domain-containing protein 5B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809220.1 True 5167 mRNA 0.50 21 13167318 13187582

Neighbor

gene id symbol gene type direction distance location
sinhcaf fam60a,LOC107388928,LOC103376222,LOC104940447 coding downstream 1210 13159313 ~ 13166108 (-)
kxd1 kxd1 coding downstream 9222 13155411 ~ 13158096 (-)
LOC120563727 LOC104940840,LOC103375251,LOC104940445 coding downstream 14614 13147847 ~ 13152704 (-)
LOC120564327 LOC104941984,LOC100534567,LOC102302869 coding downstream 140950 13016565 ~ 13026368 (-)
LOC120563354 LOC104941983,LOC103374494 coding downstream 152343 13002120 ~ 13014975 (-)
armc10 armc10 coding upstream 895 13188477 ~ 13192744 (-)
LOC120563974 lrrc17 coding upstream 17094 13204676 ~ 13209541 (-)
fam185a fam185a coding upstream 25227 13212809 ~ 13216422 (-)
LOC120564726 LOC103371554,LOC106926584,LOC106963159,LOC101069521 coding upstream 30355 13217937 ~ 13225042 (-)
tmem60 LOC104956518,LOC103371546 coding upstream 56627 13244209 ~ 13246174 (-)
G84378 NA non-coding downstream 121289 12977962 ~ 13046029 (-)
G84384 NA non-coding downstream 126872 12991027 ~ 13040446 (-)
G84376 NA non-coding downstream 183258 12972389 ~ 12984060 (-)
G84370 NA non-coding downstream 218395 12948661 ~ 12948923 (-)
G84369 NA non-coding downstream 218709 12948274 ~ 12948609 (-)
G84446 NA non-coding upstream 5687 13193269 ~ 13193706 (-)
LOC120563976 NA non-coding upstream 13361 13200943 ~ 13201663 (-)
G84532 NA non-coding upstream 47591 13235173 ~ 13235410 (-)
G84533 NA non-coding upstream 49069 13236651 ~ 13236861 (-)
G84528 NA non-coding upstream 83670 13271252 ~ 13272529 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 1022772 12141523 ~ 12144546 (-)
G84083 NA other downstream 1278920 11888027 ~ 11888398 (-)
ptpn9a ptpn9 other downstream 1906357 11173553 ~ 11260961 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other downstream 2254101 10823286 ~ 10913217 (-)
LOC120564603 NA other downstream 2452473 10706219 ~ 10714845 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other upstream 43035 13230617 ~ 13231095 (-)
prr5a prr5,LOC103371545 other upstream 59246 13246828 ~ 13256093 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other upstream 138391 13325973 ~ 13385205 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other upstream 386249 13573831 ~ 13618786 (-)
zgc:77752 NA other upstream 843522 14031104 ~ 14037716 (-)

Expression


Co-expression Network