LOC120564353 (cdk17,LOC106573057)


Basic Information

Item Value
gene id LOC120564353
gene name cdk17,LOC106573057
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 20940954 ~ 20973166 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809231.1
GGCAGAGGACAGGACACACTCAGACCAACCAGTAATCACCATCGTCTCTCGCGCTGCCATGGTCGAAAACCCAACAAAAGCGCTTCCTATTTTGTACTGGGAATGAAACTTTAAAGccttaaaaaacaaaccatgCTGCTGGAAGCTATAACCCCGCGGATATAAGCGACACTGAAGACCAGAAAGTAGCTACCACCACACCGAAACCAGAAGAAGAAGCAGTCGGTTTTTTTTTCACGCTCGGAGGGAAAGACGGCATCCGGCCTGAGAAGAAGCTCCGAGGTCGGGGACTCCGGTCGGAGCAACGTTCATCGTTTCTGGCCTCCCCTTCCTGAGAGCTCCATGGAGAAGATGAAGCGGTTCAAGCGGCGTCTCTCTCAGACGTTGCGAGGCAGCCACACCATTGACGAGTCGCTGTCTGAGCTGGCAGAGCAGATGACCATCGAGGAGAACGGCCTGAAGGACAGCGAGCCCATGGTGAGGAATGGTCGTCCTCCTTCGGCCCACAGCGTCCACTCCTTCCTCCACCAGTACACAAGCTCCTTTAAAAAGCCACCGCTGCGACGGCCTCAGAGCGTCATCGGAGGAGGCCTGGGCTCTCTCATGGTCATGCCTCGCAATGGCAGTCGCCTCGATATTGTCCACGAGAACCTGAAGATGGGCTCGGATGGGGAAAGTGACCAGGCATCGGGGACTTCCTCCGATGAGGTGCAGTCACCGACGGGTGTTTGTCTGCGGAACAGAGGGAACAGACGCATCTCTGCAGAGgaccTAAACAAACGTCTGTCTCTGCCGGCCGACATCCGGATACCTGACAGTTAcctggagaagctgcagctgagCAGCCCGTCCTTTGACCAGCCGCTGAGCCGACGCTCCCGCAGAGCATCACTGTCAGAAATTGGATTTGGGAAGCTGGAGACCTACGTCAAACTGGACAAACTGGGAGAGGGCACGTACGCTACAGTCTTCAAGGGGAGGAGTAAGCTGACCGACAACCTGGTGGCGCTGAAGGAGATCAGGCTGGAGCACGAAGAGGGGGCGCCATGCACAGCTATCAGAGAAGTGTCGCTACTGAAGGACCTGAAACACGCCAACATTGTGACGCTGCACGATATCATCCACACAGACAAGTCGCTCACACTGGTCTTCGAATACCTGGACAAAGACCTCAAGCAGTACATGGACGACTGCGGGAACATCCTGAGCATGCAGAATGTCAAGATCTTTCTGTTCCAGATCCTGCGAGGCTTGGCGTACTGTCACAAACGGAAAGTTCTCCACAGAGACCTAAAGCCCCAAAATCTGCTCATCAACGACAGAGGGGAACTCAAACTGGCTGATTTTGGCCTGGCGAGGGCTAAATCTGTGCCCACTAAAACATACTCTAACGAGGTAGTAACACTTTGGTATCGGCCTCCCGACGTGCTGCTGGGCTCCTCGGAGTACTCCACGCAGATAGACATGTGGGGTGTGGGCTGTATATTCTACGAGATGGCTGCCGGCAGGCCCCTGTTCCCGGGCTCCACGGTGGAGGACGAGCTGCACCTCATCTTCAGGCTGCTAGGCACTCCCACGGAAGACAGCTGGCCTGGAATATCCTCTATGGACGAGTTCAAGTCCTACAAGTTCCCCAAGTACAAGGTCCAGCCGCTCATTAACCACGCACCCAGCCCTCTAATCATTGGAGATGGAAATGAGCAGATGTTTCTAATCCGACCCAGGTTGGACACTGATGGCATTGACCTGCTGATGTCATTCCTAAAATACGAGTCGAAAAAGAGGATCTCTGCTGATGAAGCAATGAGACAGCCGTACTTCAGGAGCCTGGGGCCACGTGTGCACACACTGCCAGAGAGCATATCCATATTCACACTGAAGGAGGTCCAGTTGCAAAGAGATCCCGGCTACCGGAACTCATCATACCCTGAGTCAGGCAACGGAAAGAGCAGAAGACAAAGCATGCTGTTTTAGATTCTCTggactgtattttattttatttttatttgggaAGGATCTCCTCGCTGTACAGTCTCACCGATGGATCAGTAACCCGAGATGGATGTTGGTGTGGAGCATCATCACTCCTCCCAAGCTACTTGGGAAACTTGTCCACAGTGTGACCGACCCCCCTTTCCAGGTCTGGCCTGAACCTGGCCCATAAGAGacgtttatatactgtacatctatATTTATTGAAAAGAGAATTTGCTGCTAAATCCAACTACTGTCTAGAATTCTAACTGGCTCAGTCACTTTAATGAGGACATGCAATGTGTATAGATTTCATTTTTCTGAAGTGGTGGTATTTAAActgatatttttctttttgtcattttcatacATAAAAAAACTCCACCTCAATgctcctcagtgtgtgtgtgtattacacaGACAAGCAAAGAGGTTTTTCTGTAGCAACTCAAAAGGGTCTGattttctgtctctgttgcCACGGTGCTGTTTTTTAGCTGCACCCATCATTTGTGACGTTTACTCTGAAGGCTTTTGAGGCCAGCTTTGATAGAACTGATAATTGTAACCTAACTGGAGGCTAATATGAGAGCAGTGCTGCCAAGCTCTGTGCAAAAAAGATCACATTCTTGTCAGATGCTGGCATATCATTCCAGGATGCTGCGGTCTTTGTCGTGACCAACAAACAAATAGAAGGCAACGTAGAATGAATAACAAGGGCATTGCCGGATTAGTTACGTCTCCTAAATTCttccaaaaaaacataaatatgtaaCTACGGTGAACAACCTTCGCATCCTTTTCCACCTCTATCTGACACCATCTCCTCTACTTAGTAACAAATAGGAGGTGCAAAGTGAATCCCCAGTGTTTGAATCTGCTGCCTTTGTGCATTACAGATGTGCTCTCCTCTGCCATTCCCGTCTCCATCAACTGTAAAAATGGATCTTTTGTTTTCTGGATTGCCTCCATCATTGTGTTGCATGCCTGCTCTGTTGTATGAGGAAGCACACAGCCGCTAAACTCCTAATTCAGGTAGCACTAGCTATAGTCCTGCCCCTAGTGAATACGATACTGAGTCACAGTCTATTTAACAGTGTTACAA
>XM_039809232.1
GACAGCTTTCAATGAATTCCTGCCTCCCCTTCCTGAGAGCTCCATGGAGAAGATGAAGCGGTTCAAGCGGCGTCTCTCTCAGACGTTGCGAGGCAGCCACACCATTGACGAGTCGCTGTCTGAGCTGGCAGAGCAGATGACCATCGAGGAGAACGGCCTGAAGGACAGCGAGCCCATGGTGAGGAATGGTCGTCCTCCTTCGGCCCACAGCGTCCACTCCTTCCTCCACCAGTACACAAGCTCCTTTAAAAAGCCACCGCTGCGACGGCCTCAGAGCGTCATCGGAGGAGGCCTGGGCTCTCTCATGGTCATGCCTCGCAATGGCAGTCGCCTCGATATTGTCCACGAGAACCTGAAGATGGGCTCGGATGGGGAAAGTGACCAGGCATCGGGGACTTCCTCCGATGAGGTGCAGTCACCGACGGGTGTTTGTCTGCGGAACAGAGGGAACAGACGCATCTCTGCAGAGgaccTAAACAAACGTCTGTCTCTGCCGGCCGACATCCGGATACCTGACAGTTAcctggagaagctgcagctgagCAGCCCGTCCTTTGACCAGCCGCTGAGCCGACGCTCCCGCAGAGCATCACTGTCAGAAATTGGATTTGGGAAGCTGGAGACCTACGTCAAACTGGACAAACTGGGAGAGGGCACGTACGCTACAGTCTTCAAGGGGAGGAGTAAGCTGACCGACAACCTGGTGGCGCTGAAGGAGATCAGGCTGGAGCACGAAGAGGGGGCGCCATGCACAGCTATCAGAGAAGTGTCGCTACTGAAGGACCTGAAACACGCCAACATTGTGACGCTGCACGATATCATCCACACAGACAAGTCGCTCACACTGGTCTTCGAATACCTGGACAAAGACCTCAAGCAGTACATGGACGACTGCGGGAACATCCTGAGCATGCAGAATGTCAAGATCTTTCTGTTCCAGATCCTGCGAGGCTTGGCGTACTGTCACAAACGGAAAGTTCTCCACAGAGACCTAAAGCCCCAAAATCTGCTCATCAACGACAGAGGGGAACTCAAACTGGCTGATTTTGGCCTGGCGAGGGCTAAATCTGTGCCCACTAAAACATACTCTAACGAGGTAGTAACACTTTGGTATCGGCCTCCCGACGTGCTGCTGGGCTCCTCGGAGTACTCCACGCAGATAGACATGTGGGGTGTGGGCTGTATATTCTACGAGATGGCTGCCGGCAGGCCCCTGTTCCCGGGCTCCACGGTGGAGGACGAGCTGCACCTCATCTTCAGGCTGCTAGGCACTCCCACGGAAGACAGCTGGCCTGGAATATCCTCTATGGACGAGTTCAAGTCCTACAAGTTCCCCAAGTACAAGGTCCAGCCGCTCATTAACCACGCACCCAGCCCTCTAATCATTGGAGATGGAAATGAGCAGATGTTTCTAATCCGACCCAGGTTGGACACTGATGGCATTGACCTGCTGATGTCATTCCTAAAATACGAGTCGAAAAAGAGGATCTCTGCTGATGAAGCAATGAGACAGCCGTACTTCAGGAGCCTGGGGCCACGTGTGCACACACTGCCAGAGAGCATATCCATATTCACACTGAAGGAGGTCCAGTTGCAAAGAGATCCCGGCTACCGGAACTCATCATACCCTGAGTCAGGCAACGGAAAGAGCAGAAGACAAAGCATGCTGTTTTAGATTCTCTggactgtattttattttatttttatttgggaAGGATCTCCTCGCTGTACAGTCTCACCGATGGATCAGTAACCCGAGATGGATGTTGGTGTGGAGCATCATCACTCCTCCCAAGCTACTTGGGAAACTTGTCCACAGTGTGACCGACCCCCCTTTCCAGGTCTGGCCTGAACCTGGCCCATAAGAGacgtttatatactgtacatctatATTTATTGAAAAGAGAATTTGCTGCTAAATCCAACTACTGTCTAGAATTCTAACTGGCTCAGTCACTTTAATGAGGACATGCAATGTGTATAGATTTCATTTTTCTGAAGTGGTGGTATTTAAActgatatttttctttttgtcattttcatacATAAAAAAACTCCACCTCAATgctcctcagtgtgtgtgtgtattacacaGACAAGCAAAGAGGTTTTTCTGTAGCAACTCAAAAGGGTCTGattttctgtctctgttgcCACGGTGCTGTTTTTTAGCTGCACCCATCATTTGTGACGTTTACTCTGAAGGCTTTTGAGGCCAGCTTTGATAGAACTGATAATTGTAACCTAACTGGAGGCTAATATGAGAGCAGTGCTGCCAAGCTCTGTGCAAAAAAGATCACATTCTTGTCAGATGCTGGCATATCATTCCAGGATGCTGCGGTCTTTGTCGTGACCAACAAACAAATAGAAGGCAACGTAGAATGAATAACAAGGGCATTGCCGGATTAGTTACGTCTCCTAAATTCttccaaaaaaacataaatatgtaaCTACGGTGAACAACCTTCGCATCCTTTTCCACCTCTATCTGACACCATCTCCTCTACTTAGTAACAAATAGGAGGTGCAAAGTGAATCCCCAGTGTTTGAATCTGCTGCCTTTGTGCATTACAGATGTGCTCTCCTCTGCCATTCCCGTCTCCATCAACTGTAAAAATGGATCTTTTGTTTTCTGGATTGCCTCCATCATTGTGTTGCATGCCTGCTCTGTTGTATGAGGAAGCACACAGCCGCTAAACTCCTAATTCAGGTAGCACTAGCTATAGTCCTGCCCCTAGTGAATACGATACTGAGTCACAGTCTATTTAACAGTGTTACAA
>XM_039809234.1
GCAGAGGACAGGACACACTCAGACCAACCAGTAATCACCATCGTCTCTCGCGCTGCCATGGTCGAAAACCCAACAAAAGCGCTTCCTATTTTGTACTGGGAATGAAACTTTAAAGccttaaaaaacaaaccatgCTGCTGGAAGCTATAACCCCGCGGATATAAGCGACACTGAAGACCAGAAAGTAGCTACCACCACACCGAAACCAGAAGAAGAAGCAGTCGGTTTTTTTTTCACGCTCGGAGGGAAAGACGGCATCCGGCCTGAGAAGAAGCTCCGAGGTCGGGGACTCCGGTCGGAGCAACGTTCATCGTTTCTGGCCTCCCCTTCCTGAGAGCTCCATGGAGAAGATGAAGCGGTTCAAGCGGCGTCTCTCTCAGACGTTGCGAGGCAGCCACACCATTGACGAGTCGCTGTCTGAGCTGGCAGAGCAGATGACCATCGAGGAGAACGGCCTGAAGGACAGCGAGCCCATGGTGAGGAATGGTCGTCCTCCTTCGGCCCACAGCGTCCACTCCTTCCTCCACCAGTACACAAGCTCCTTTAAAAAGCCACCGCTGCGACGGCCTCAGAGCGTCATCGGAGGAGGCCTGGGCTCTCTCATGGTCATGCCTCGCAATGGCAGTCGCCTCGATATTGTCCACGAGAACCTGAAGATGGGCTCGGATGGGGAAAGTGACCAGGCATCGGGGACTTCCTCCGATGAGGTGCAGTCACCGACGGGTGTTTGTCTGCGGAACAGAGGGAACAGACGCATCTCTGCAGAGgaccTAAACAAACGTCTGTCTCTGCCGGCCGACATCCGGATACCTGACAGTTAcctggagaagctgcagctgagCAGCCCGTCCTTTGACCAGCCGCTGAGCCGACGCTCCCGCAGAGCATCACTGTCAGAAATTGGATTTGGGAAGCTGGAGACCTACGTCAAACTGGACAAACTGGGAGAGGGCACGTACGCTACAGTCTTCAAGGGGAGGAGTAAGCTGACCGACAACCTGGTGGCGCTGAAGGAGATCAGGCTGGAGCACGAAGAGGGGGCGCCATGCACAGCTATCAGAGAAGTGTCGCTACTGAAGGACCTGAAACACGCCAACATTGTGACGCTGCACGATATCATCCACACAGACAAGTCGCTCACACTGGTCTTCGAATACCTGGACAAAGACCTCAAGCAGTACATGGACGACTGCGGGAACATCCTGAGCATGCAGAATGTCAAGATCTTTCTGTTCCAGATCCTGCGAGGCTTGGCGTACTGTCACAAACGGAAAGTTCTCCACAGAGACCTAAAGCCCCAAAATCTGCTCATCAACGACAGAGGGGAACTCAAACTGGCTGATTTTGGCCTGGCGAGGGCTAAATCTGTGCCCACTAAAACATACTCTAACGAGGTAGTAACACTTTGGTATCGGCCTCCCGACGTGCTGCTGGGCTCCTCGGAGTACTCCACGCAGATAGACATGTGGGGTGTGGGCTGTATATTCTACGAGATGGCTGCCGGCAGGCCCCTGTTCCCGGGCTCCACGGTGGAGGACGAGCTGCACCTCATCTTCAGGCTGCTAGGCACTCCCACGGAAGACAGCTGGCCTGGAATATCCTCTATGGACGAGTTCAAGTCCTACAAGTTCCCCAAGTACAAGGTCCAGCCGCTCATTAACCACGCACCCAGGTTGGACACTGATGGCATTGACCTGCTGATGTCATTCCTAAAATACGAGTCGAAAAAGAGGATCTCTGCTGATGAAGCAATGAGACAGCCGTACTTCAGGAGCCTGGGGCCACGTGTGCACACACTGCCAGAGAGCATATCCATATTCACACTGAAGGAGGTCCAGTTGCAAAGAGATCCCGGCTACCGGAACTCATCATACCCTGAGTCAGGCAACGGAAAGAGCAGAAGACAAAGCATGCTGTTTTAGATTCTCTggactgtattttattttatttttatttgggaAGGATCTCCTCGCTGTACAGTCTCACCGATGGATCAGTAACCCGAGATGGATGTTGGTGTGGAGCATCATCACTCCTCCCAAGCTACTTGGGAAACTTGTCCACAGTGTGACCGACCCCCCTTTCCAGGTCTGGCCTGAACCTGGCCCATAAGAGacgtttatatactgtacatctatATTTATTGAAAAGAGAATTTGCTGCTAAATCCAACTACTGTCTAGAATTCTAACTGGCTCAGTCACTTTAATGAGGACATGCAATGTGTATAGATTTCATTTTTCTGAAGTGGTGGTATTTAAActgatatttttctttttgtcattttcatacATAAAAAAACTCCACCTCAATgctcctcagtgtgtgtgtgtattacacaGACAAGCAAAGAGGTTTTTCTGTAGCAACTCAAAAGGGTCTGattttctgtctctgttgcCACGGTGCTGTTTTTTAGCTGCACCCATCATTTGTGACGTTTACTCTGAAGGCTTTTGAGGCCAGCTTTGATAGAACTGATAATTGTAACCTAACTGGAGGCTAATATGAGAGCAGTGCTGCCAAGCTCTGTGCAAAAAAGATCACATTCTTGTCAGATGCTGGCATATCATTCCAGGATGCTGCGGTCTTTGTCGTGACCAACAAACAAATAGAAGGCAACGTAGAATGAATAACAAGGGCATTGCCGGATTAGTTACGTCTCCTAAATTCttccaaaaaaacataaatatgtaaCTACGGTGAACAACCTTCGCATCCTTTTCCACCTCTATCTGACACCATCTCCTCTACTTAGTAACAAATAGGAGGTGCAAAGTGAATCCCCAGTGTTTGAATCTGCTGCCTTTGTGCATTACAGATGTGCTCTCCTCTGCCATTCCCGTCTCCATCAACTGTAAAAATGGATCTTTTGTTTTCTGGATTGCCTCCATCATTGTGTTGCATGCCTGCTCTGTTGTATGAGGAAGCACACAGCCGCTAAACTCCTAATTCAGGTAGCACTAGCTATAGTCCTGCCCCTAGTGAATACGATACTGAGTCACAGTCTATTTAACAGTGTTACAA

Function

symbol description
cdk17 Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to be involved in protein phosphorylation and regulation of transcription involved in G1/S transition of mitotic cell cycle. Predicted to act upstream of or within phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human CDK17 (cyclin dependent kinase 17).

NR:

description
PREDICTED: cyclin-dependent kinase 17-like isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K15595 CDK17, PCTK2; cyclin-dependent kinase 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809231.1 True 3079 mRNA 0.50 18 20940954 20973166
XM_039809232.1 False 2780 mRNA 0.50 18 20940954 20972172
XM_039809234.1 False 3027 mRNA 0.50 17 20940954 20973165

Neighbor

gene id symbol gene type direction distance location
hal hal,LOC102785645 coding downstream 9878 20919230 ~ 20931076 (-)
LOC120563851 LOC104963714,LOC103358322 coding downstream 36139 20894804 ~ 20904815 (-)
LOC120563620 NA coding downstream 63820 20859420 ~ 20877134 (-)
nr2c1 nr2c1 coding downstream 82016 20850776 ~ 20858938 (-)
LOC120563622 LOC103358318,LOC104940631 coding downstream 92227 20836690 ~ 20848727 (-)
camk1db LOC104963721,LOC101175563,LOC105938601,LOC102229393,LOC106946080 coding upstream 9388 20982554 ~ 21002394 (-)
dhtkd1 dhtkd1,LOC102784200 coding upstream 31217 21004383 ~ 21024546 (-)
LOC120563607 celf2,LOC104940643 coding upstream 53688 21026854 ~ 21059534 (-)
taf3 taf3,LOC103371965 coding upstream 89352 21062518 ~ 21071325 (-)
tasor2 NA coding upstream 99900 21073066 ~ 21098386 (-)
G86853 NA non-coding downstream 32364 20908389 ~ 20908590 (-)
G86761 NA non-coding downstream 241317 20698815 ~ 20699637 (-)
G86686 NA non-coding downstream 479131 20402744 ~ 20461823 (-)
G86660 NA non-coding downstream 676748 20250890 ~ 20264206 (-)
G86652 reln non-coding downstream 699104 20241433 ~ 20241850 (-)
G86976 NA non-coding upstream 129464 21102630 ~ 21103379 (-)
LOC120563411 NA non-coding upstream 167341 21140507 ~ 21146513 (-)
G87030 LOC103366871,LOC104946806,LOC106525492,LOC108230167 non-coding upstream 271844 21245010 ~ 21251759 (-)
G87107 nrcam,LOC101067328 non-coding upstream 489539 21462705 ~ 21466246 (-)
G87120 NA non-coding upstream 513366 21486532 ~ 21512528 (-)
LOC120563850 NA other downstream 53328 20877668 ~ 20887626 (-)
LOC120564033 LOC103358331,LOC102195670 other downstream 111719 20806882 ~ 20829235 (-)
G86638 NA other downstream 681695 20252639 ~ 20259259 (-)
cep152 cep152,LOC104960117 other downstream 1367266 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 1552379 19387822 ~ 19388575 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 396365 21369531 ~ 21372509 (-)
G87140 NA other upstream 739876 21713042 ~ 21713554 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other upstream 761840 21735006 ~ 21739344 (-)
LOC120564428 NA other upstream 1374004 22347170 ~ 22366978 (-)
parvg parvg other upstream 1715995 22689161 ~ 22706296 (-)

Expression


Co-expression Network