LOC120564359


Basic Information

Item Value
gene id LOC120564359
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 23653545 ~ 23663803 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809246.1
ATGCCTGAGTCTCCTCTCAGTCCCACGGCAGCCCGTCAAACCCCAGCCAGCAGCCTCCTCAGTCACACAGACATCGGTGCAAGAGAGAGAGTAGCTAATGGGGACTCCTGCAGTGGAGTGAGTGGTGAAAACTTGCAGAGTCTCCACCATAAACAGGTGTTTGTGGCTATGATGGCTCCTCAGCAGATGCAGCAGCTCCTTTCCTCCAACCAGCTGCAGGCTCTCATTCACCAGAAGCAACAAGCCCTTCTGCTCCAGCAGCAACATCTGAAAGAGTTTTACAAGAAGCAACAACAGATTCACCTGCAGCTGCTTCAACAAAAGCCCAGCAAGAAAGTCAAAGAGTTCCCTGCACAGCAGCTTGTGTTCCAGCAgctcctccagcagcagcagcagcagcagcagcagcagctcctccGGGTGCAGAGACCCATCCTGTCCTCCCCCGCCCTCTCTCCAGctggtTTTAGCCCTGCAAAGATGCAGCAGATATGGAAAGAGCTCACAAACGGAATAACTGAAGATAAAACCACATCGAAAGACAATCAGGACTCTTCTGCTACCAACATAATGTCAACAAAAGTCACAGGGAGGCAGACCGGTGACCAGCAGTCGTCTTCTCCTCGCAGGGCACAATGTGCTGTCAAAGCTGATCGCGCTGCCGCACACGCTCTCTACAGTCACGGTGTGTGTCACTGGCCCGGATGTGAGTCGGTGTGTGAAAACTTCAGCCAGTTCATCAAGCACATAGGCAGCGAGCACACTCTGGATGATAGAAATACAGCACAGTGCAGAGTCCAGATGCAGGTGGTTCAGCAACTTGAGCTTCAGCTCTGCAAAGAACGGGAGCGTCTCCGAGCGATGATGGCTCACCTGCATCTGCCATCTTTAGAATCTCAGTTGATCTCTGCACCCGCAAGTCTACAGTTGCCACAATCTGATACGGCTGCTGACCCACACGGTCTTCAGCTCAGTTTAGTCACCGGCACCCACAACCTGGCCTCGCCGAGCCCGTCAGACTCCCCACAACCTCTGGCCTCTGTTAGCACTCCATCCCAGGGGAGTGAAGAAGAGTGTGCTGGGGCCATAAGATGTCGTCATCACCCTTTGGTCTACTCCCTGTCTTCAGAAAATGAATATGAGCTTTACAAGAACACCGATATCAGACCACCTTTCACCTACGCAACACTGATAAGACAGGCCATTATGGAAACATCAGACATGCAACTAACACTAAACGAGATATACAACTGGTTCACACGGACATTTGCTTATTTCAGACGCAACGCCGCCACTTGGAAGAACGCAGTGCGCCACAACCTGAGCCTGCACAAGTGTTTTGTGCGTGTGGAGAATGTGAAAGGCGCAGTGTGGACAGTAGACGAGGTGGAATACCAGAGGAGGAGATCCCAGAAGATCCCAGGGAGTCCATCGCTGATAAAAAATGTGTCCTCCAGCCTTGATTTTGGGACGGTTCTGAATGCCAGCTTACAGACGGCACTGGCTGAGGCGTCACTGCCAGGATTCAAGAAGGAGTGTGTGAGCAGAAACTCCACGAGTCAAACGCAGGAGAACAAAGCAACAAACAGCAACACTAAACAAAACTTCTCTCCACCAGTCCAGCAGTCTCTTTTCCTTAAAGGCCAAGCGCTGAATCTGAATGACCAAGAATCTCTGATGGCCACAGTAAAGCCAGCCATACTGCCGCGCGACATGACTGAAGATTATGAAGAACATTTTTTTGACCCTGAATGACAAGAGAACGCTTTCAGACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809246.1 True 1776 mRNA 0.52 15 23653545 23663803

Neighbor

gene id symbol gene type direction distance location
LOC120563807 NA coding downstream 3168 23647381 ~ 23650377 (-)
LOC120563353 NA coding downstream 68978 23577578 ~ 23584567 (-)
avpr1aa LOC103358863,LOC100711102 coding downstream 97469 23551853 ~ 23556076 (-)
ppm1h ppm1h coding downstream 116020 23503797 ~ 23537525 (-)
fbln1 fbln1,LOC104955511,LOC103380317 coding downstream 245876 23376581 ~ 23407669 (-)
ptdss2 ptdss2 coding upstream 32230 23696033 ~ 23733655 (-)
LOC120564460 LOC102301235,LOC102778663,LOC102214577,LOC100712095 coding upstream 216488 23880291 ~ 23893596 (-)
LOC120563437 ifitm5,LOC103379954 coding upstream 236490 23900293 ~ 23904797 (-)
trnam-cau_7 NA coding upstream 241299 23905102 ~ 23905173 (-)
trnar-acg_18 NA coding upstream 252031 23915834 ~ 23915906 (-)
G87596 ankrd26 non-coding downstream 23260 23629726 ~ 23630285 (-)
G87469 NA non-coding downstream 415013 23231238 ~ 23238532 (-)
LOC120563856 NA non-coding downstream 428904 23198572 ~ 23224641 (-)
G87464 NA non-coding downstream 504201 23149119 ~ 23149344 (-)
G87400 NA non-coding downstream 815679 22761185 ~ 22837866 (-)
G87614 bmt2 non-coding upstream 16945 23680748 ~ 23737505 (-)
G87695 NA non-coding upstream 374081 24037884 ~ 24039901 (-)
G87693 NA non-coding upstream 378655 24042458 ~ 24043739 (-)
G87733 NA non-coding upstream 695190 24358993 ~ 24359284 (-)
G87748 NA non-coding upstream 920555 24584358 ~ 24584608 (-)
G87538 NA other downstream 154886 23494330 ~ 23498659 (-)
LOC120564579 LOC103366737 other downstream 231088 23411510 ~ 23422457 (-)
parvg parvg other downstream 947249 22689161 ~ 22706296 (-)
LOC120564428 NA other downstream 1286567 22347170 ~ 22366978 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other downstream 1914201 21735006 ~ 21739344 (-)
G87624 LOC103358853,LOC104921025 other upstream 75179 23738982 ~ 23741190 (-)
LOC120563922 NA other upstream 245366 23909169 ~ 23916202 (-)
G87803 NA other upstream 1400949 25064752 ~ 25065488 (-)
G87897 NA other upstream 1932550 25596353 ~ 25596761 (-)
phrf1 NA other upstream 1966973 25630776 ~ 25647000 (-)

Expression


Co-expression Network