LOC120564471 (LOC104960979,LOC103355225,LOC103150264,LOC103466396,LOC106915861)


Basic Information

Item Value
gene id LOC120564471
gene name LOC104960979,LOC103355225,LOC103150264,LOC103466396,LOC106915861
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 20088128 ~ 20115384 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809491.1
ctctctgacTCCCAGCATCAATGGCAGCCCGGTGATGCTGTCATAAACTGTTTAACGATCGCGAAGGGGGCCGTCGTATTGTGAATGGTTATTATGATTGGCTGCATTCATTTGTAAGTAGGCTAGGCCTATACTGTGCAGTTGTATGCGACCCCGCTCGAGAGATAGAATAGGCTACAACCTGCTTGTTATAGGCTGTTGCTATTTTTATTTGGGTGTAGCCGCGGTCGGCTTGAATGATACATTTCTCTTTTTACTCGGAGGTTTTCCAAGGGCATCAGTGAGAGACACAGTGCAGCAGCGATCTGCATGTCTGACGGCTAGACGGAGCAAGAGGGAAGGACACTGTTTCTGCTGCTGTAGTCGATGAGCTTTCACAGTTATCGGTTATACCCAGGGTACAAGCACTCTGCTTTAGCTGCTCACTCGGTTCACCGCCTGGCTTTAGGATGCGACGTCATGAGTTGATCGCGCCTGACAGATGTTGCTGTGTTGCAGTTGCACAGGCATAGATTCTCCGCTTGCTCTCGCTGTTTTGGGGAGGATTCTGTAAAACGGTTCATGCGATAAATGCTAAGTCCTCGCTTCGTGCTCGGACAGATCGCAACATTCATAGTCTTCGGGATTGCATAAAATGATACCTGGATCTGCCGCATCAATGCTACCATCTGCAGAAGCTGCGAAATTGTACCAGACCAATTACGTCCGCAACTCCCGTGTCATCGGACTTTTATGGGCCATCTTCACTATCCTGTTCGGTATTGTTAACGTGACCATCTTCTCACAGCCCTATTGGATTGGGGATGGTGTGGATACACCGCAGGCCGGTTACTTCGGCCTTTTTCACTATTGCGTCGGAGATGGAATCTCCAGAGACATGGCCTGCCAGGGTAGCTTCACCGAGTTCGCCGAAATCCCCTCCACTGCGTTCAAGGCCGCCTCCTTCTTGATTGGAATGTCCATGATGTTGGTTGTCACCTGCATCGGCTGCTTCagtctcttcttcctcctcagcacctcCACCGTGTACAAGATCTGCGGCTGGATGCAAGCAGCATCAGGTGTCTGTCTGGTGTTGGGTTGTATGATTTATCCTGATGGTTGGGACAGTGACGAAGTTCGGAGGATGTGCggagagcagacagacaaataCAGCCTGGGGGCCTGCTCAGTGCGTTGGGCCTACATCTTGGCTATTATGGGCATCCTGGATGCTCTTATCCTCTCCTTCCTGGCTTTCGTCCTGGGGAACCGACAGGATGGACTCATGACAGAAGAGCTGCTGGCTGAGAGCAAGGaGGGAGGCAATGCCTAACCAAATCTTAAGGTTCCTGAATTTCCATGTGTCTGTTTTCATGAAGTACCAGTCAATCCTCAACATCAGCTTAGAGGAAGGAGGCCATCCACGTCTGTGACGGAGAGGAATACTATGGAACCAGCCAGCCTGCCTATCACATCTACCTGCCAAAATCCCAGTGTAACCTACCCTCAAAGTCCATCCCTTTTGCTTGCAGTAACTAAATCATCCCCAGCACTTAGATGGAGCCCAATGCACTTTTACCCTAATGTGTCTACAGACCTAACCCTTGCACAGCATTGCATAGACCATGGCAGGGGCAGAGACTGTTATTCTGTTGAGAAGTATATGGACTACCCACTACCTACCTGAGAAGGCACAGGGTTGACATTGTACACATGCAGTActagcacacaaacacacacacaaacacatacacacacacacgccaactcaatcatatgcacaaacacaacTCAACGCACATACATTACATTCAAACAAAACATTGACAAACTGTAATTACAAGTATTAAACTATGTTAACACTTAGCCGTGTGTACCACCGTCAGAATGTGTGTCATgttttatttgtgaaaaaaacagctCATTTTAAGATAATATCGGGTTGATGTAAATCTATTGTGTTTCATATGTGAAGTTTGACAattaaatgaaagttttttgttttttttgctcataCACCCCTTTGTTCCTCTTCGTTTACtagaaaaaaagatatttaagaTATTTTATATGAATATTATCATCCAAAAGAGAAGAGAACTTGTATTAAAAAGTATGTACAGTGAATATTAAAGATGTTCTAGGAATTTTAACTAAATCCATTCAATGCCCTGCTAGCTAACTTTGCACAGCGCTTCAGTTTGAGAAGAAATCTAATATTTTATAGTCTGTGGTATCTACACTGTGATGGGGGCTATTAGGATGTGTGCTGCAGGATTTGTAGCTGCTGTGTGAGTGTGCTTCTGTATGTGTGAAGGGaggtctgtgggtgtgtgtgtgtgagtgagtgagcgcATGCACATAATGTGAGTGTTGGTGTGAATGTGTTGTGTGCAATAGTTGGACTAAAGAACCAATATGCCAACCTCACACACAAATGTCCTGTTGTGTAGCccaatctgtctgtctctgtctttgtctccagCTCTCGCTTTCTGTTTTACTCTCTTTGACTCCCTTTTCTCGATTTGTTTTGTTGGGGCATACAGGGTAACATGATGGAGTTGGACAGTATTATGTATTGTGACTGATGATGGATCAGTAAGGTCTGTCCCAGCATCACCTGTGGATATGTTCCTGTGTAAATAGATATTCTATAGATACCAAACAATTAGCAAATATGGAGGAGGTTAACTTAGAGCAATTAAAGACATTCATTTAAGAATATATGAACACTTAATAAAGGTTTTCACTGTAAAA

Function

NR:

description
PREDICTED: lipoma HMGIC fusion partner-like 3 protein isoform X1

GO: NA

KEGG:

id description
K23893 LHFPL; LHFPL tetraspan subfamily member protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809491.1 True 2742 mRNA 0.45 4 20088128 20115384

Neighbor

gene id symbol gene type direction distance location
si:dkey-29p10.4 NA coding downstream 4528 20075491 ~ 20083600 (-)
LOC120564329 tp53i11 coding downstream 29005 20016169 ~ 20059123 (-)
cd82b LOC103355222 coding downstream 75818 19987783 ~ 20012310 (-)
tspan18b tspan18 coding downstream 133313 19885911 ~ 19954815 (-)
caprin1b caprin1 coding downstream 275255 19799132 ~ 19812873 (-)
bncr NA coding upstream 137415 20252799 ~ 20255338 (-)
LOC120563520 NA coding upstream 139982 20255366 ~ 20256420 (-)
LOC120563522 NA coding upstream 141060 20256444 ~ 20257777 (-)
LOC120563518 plcz1,LOC104942417,LOC106523397,LOC108229959 coding upstream 160493 20275877 ~ 20293118 (-)
LOC120564552 LOC103358309,LOC104963723 coding upstream 474918 20590302 ~ 20596104 (-)
G86605 NA non-coding downstream 72316 20014338 ~ 20015812 (-)
G86575 lmo2 non-coding downstream 264755 19821540 ~ 19823373 (-)
G86566 NA non-coding downstream 311085 19774307 ~ 19777043 (-)
G86549 NA non-coding downstream 362935 19723973 ~ 19725193 (-)
G86543 LOC104950121,LOC106908881,LOC103380454 non-coding downstream 392313 19694995 ~ 19695815 (-)
G86652 reln non-coding upstream 126049 20241433 ~ 20241850 (-)
G86660 NA non-coding upstream 135506 20250890 ~ 20264206 (-)
G86686 NA non-coding upstream 287360 20402744 ~ 20461823 (-)
G86761 NA non-coding upstream 583431 20698815 ~ 20699637 (-)
G86853 NA non-coding upstream 793005 20908389 ~ 20908590 (-)
cep152 cep152,LOC104960117 other downstream 514440 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 699553 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 770650 19315385 ~ 19317478 (-)
LOC120564082 svip other downstream 927641 19156758 ~ 19160487 (-)
G86194 tph1 other downstream 1077212 19007196 ~ 19010916 (-)
G86638 NA other upstream 137255 20252639 ~ 20259259 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 691498 20806882 ~ 20829235 (-)
LOC120563850 NA other upstream 762284 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 1254147 21369531 ~ 21372509 (-)
G87140 NA other upstream 1597658 21713042 ~ 21713554 (-)

Expression


Co-expression Network