LOC120564488 (LOC101485419,LOC102777949,LOC104949269,LOC102291458,LOC100702099)


Basic Information

Item Value
gene id LOC120564488
gene name LOC101485419,LOC102777949,LOC104949269,LOC102291458,LOC100702099
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 27673598 ~ 27675858 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809512.1
AGGCGGGGTTGTTTCAGGTAAAGCAGCATCAATGCACGTGAAGTTTGTACACAAGAAGAACTTGTCCCCCAGCTGCGGTGTGGGGATCTCTTATTTTGAGCAGACATGATGTCCGTGGCCGCCCGGTCCGGGGCTCTTGCCCCTTACTTGCATTCAACAAAACACGCAGTTAAAAGCCTGGTGAAACCTGGAGCGAAGGACTTGGCGCCTGCTGCTGCTGCTGGGGGGATCCGCCTTGCCCACACCGATATCAAGATTCCTGACTTTACAGACTACCGTCGCCCCGAGGTTACCGACCCCAACAAGTCCTCCCAGGACAGCAGTGACGCAAGAAGGTCGTTCTCTTACCTTTTCACTGGAGCGACCACTGTGGTTGGTGTGTATGCAGCCAAAACCGTGGTCACCCAGTTTCTCTCCTCAATGAGTGCGACAGCAGATGTCCTGGCCCTATCCCAGATTGAGATCAAGCTCAGTGAGATCCCTGAAGGCAAAAACATGACCTTCAAGTGGAGAGGAAAGCCCCTGTTTGTCCGCCACCGCACAGAGAAGGAAATCGCCACAGAGGAGGGTGTGAATATGTCGGAGCTGCGTGACCCCCAGCATGACAAGGATAGAGTGATTAACCCCAAGTGGATGGTCGTCCTCGGTGTGTGCACCCATCTGGGTTGTGTGCCCATCGCCAACGCTGGAGACTTCGGAGGCTACTACTGTCCCTGCCACGGCTCCCACTACGATGCTTCAGGAAGAATAAGAAAGGGACCAGCGCCTCTTAACCTGGAGGTTCCCTACTATGTATTCCCTGATGAGGACACACTCTTGGTGGGATAAATACTGGAGCTCTATCTCAGTTCCTCTAtgtaatatgtatttttttttgatgGCTCCGTGTGAGTGTTGAGGGTGCAATAAAATATGTGTAGTtactaataaagacatatttCCAACTC

Function

NR:

description
cytochrome b-c1 complex subunit Rieske, mitochondrial

GO: NA

KEGG:

id description
K00411 UQCRFS1, RIP1, petA; ubiquinol-cytochrome c reductase iron-sulfur subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809512.1 True 947 mRNA 0.52 2 27673598 27675858

Neighbor

gene id symbol gene type direction distance location
uri1 NA coding downstream 4126 27655464 ~ 27669472 (-)
cry1b LOC103363998,LOC102799801,LOC100703716 coding downstream 432660 27229826 ~ 27240938 (-)
si:ch73-62b13.1 LOC104935271,LOC103361117,LOC104951776 coding downstream 470673 27190915 ~ 27202925 (-)
etfbkmt etfbkmt coding downstream 530287 27135856 ~ 27143311 (-)
washc4 kiaa1033 coding downstream 595765 27061216 ~ 27077833 (-)
ccdc113 NA coding upstream 110814 27786672 ~ 27790974 (-)
tbxas1 tbxas1 coding upstream 123148 27799006 ~ 27811080 (-)
tspan33b LOC104940279,LOC100694777,LOC101482493,LOC106573176,LOC105926564 coding upstream 500944 28176802 ~ 28192660 (-)
cracr2aa LOC103365762 coding upstream 843200 28519058 ~ 28543251 (-)
utp4 utp4 coding upstream 1283532 28959390 ~ 28974789 (-)
G88405 NA non-coding downstream 248963 27420437 ~ 27424635 (-)
G88391 selenoo non-coding downstream 295580 27376859 ~ 27378018 (-)
G88381 panx2 non-coding downstream 310697 27359796 ~ 27362901 (-)
G88380 panx2 non-coding downstream 315419 27357079 ~ 27358179 (-)
G88305 NA non-coding downstream 503331 27169988 ~ 27170267 (-)
G88467 NA non-coding upstream 23762 27699620 ~ 27699935 (-)
G88510 NA non-coding upstream 299323 27975181 ~ 27975661 (-)
G88513 NA non-coding upstream 300107 27975965 ~ 27982294 (-)
G88596 NA non-coding upstream 842298 28518156 ~ 28523417 (-)
G88613 NA non-coding upstream 1116854 28792712 ~ 28792984 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other downstream 23536 27623990 ~ 27650062 (-)
G88379 panx2 other downstream 317822 27354972 ~ 27355776 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other downstream 444226 27223962 ~ 27229372 (-)
G88249 mthfs other downstream 659187 27013237 ~ 27014411 (-)
ptprjb.1 NA other downstream 981354 26653636 ~ 26692244 (-)
LOC120564781 NA other upstream 136387 27812245 ~ 27824961 (-)
tspan9a tspan9,LOC103365760,LOC106534164,LOC101481610,LOC108237543 other upstream 463428 28139286 ~ 28382715 (-)
G89085 NA other upstream 3046250 30722108 ~ 30722503 (-)
G89241 NA other upstream 3567310 31243168 ~ 31268469 (-)
G89365 NA other upstream 4430765 32106623 ~ 32108066 (-)

Expression


Co-expression Network