LOC120564497


Basic Information

Item Value
gene id LOC120564497
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14273629 ~ 14276077 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809530.1
TAAGAGATGAGTCAACAGCCCTCCACTATAAGATGTCCTGATGGAGCCCAACTGtggcatacacacagacatccagCTAAGGAATACCAGTGCTATTCTGAGTTTGGTAAACCCAGAGAAATACTACAATTATGGAATACACTTTGGCCCTGCTGTTTTCTCTGCTGCACGTTTTGAGTGTGGGTACAGCTGCTCCTCTGCCAGCGGAAGTAGTGAAGATGAGATCAAAAGTGAAATGGATGGCCGAGCAGCTGGTGGTTAGGCTGAATAAAGATTTCCAGGTCCCTACTGGTCTGACACTGCGTCAACCTTCTGATGATCTGGATGGACTTTCCTCAATAGTGACAGTCTTGGAGGGTTACAACAGCCTGATCTCTGACACCAACGACTGGATCCCTCAGGTCAAGTCTGATATCTCTTCACTTACGGGTTACCTCGATGAGTGGAGGCAAGGGCACTGCAGCGAGCTGCGGCCGAAGCCTTCGGTGCCGGGGCCGCTCCAAGAGCTACAGAGTCAAAAGTTAAAGTATATTCACACCGTGAGCATCGAGGCTCTCATGAGAGTGAAGGAGTTTCTCCATATGCTATTGAAAAATCTGGATCATCTTGAGACTTGCTGA
>XM_039809531.1
ATGGAATACACTTTGGCCCTGCTGTTTTCTCTGCTGCACGTTTTGAGTGTGGGTACAGCTGCTCCTCTGCCAGCGGAAGTAGTGAAGATGAGATCAAAAGTGAAATGGATGGCCGAGCAGCTGGTGGTTAGGCTGAATAAAGATTTCCAGGTCCCTACTGGTCTGACACTGCGTCAACCTTCTGATGATCTGGATGGACTTTCCTCAATAGTGACAGTCTTGGAGGGTTACAACAGCCTGATCTCTGACACCAACGACTGGATCCCTCAGGTCAAGTCTGATATCTCTTCACTTACGGGTTACCTCGATGAGTGGAGGCAAGGGCACTGCAGCGAGCTGCGGCCGAAGCCTTCGGTGCCGGGGCCGCTCCAAGAGCTACAGAGTCAAAAGTTAAAGTATATTCACACCGTGAGCATCGAGGCTCTCATGAGAGTGAAGGAGTTTCTCCATATGCTATTGAAAAATCTGGATCATCTTGAGACTTGCTGAAAGACTGACATTAGGACCAATATTTGCAAGTTGCTGGCAAGATTTGCCACGTCTGCATCAGTGATGTCTGACTTCGCACCTGGCAAAGTTGAACTTTTGCAATGTTTTGAAGGAAATGTATTCTTGAACACACACTTATTTATATACGTATTAATTTATAGACTATttagaaaatatgtattttgtaACATTGTCTTCTCATCAGGATGTTTGAAGCAAAAGTGTAGTTTCCTCAGGATTGTTTCTATGCAAAGTGTTCTACGCTTTGCACACAAAGATAAATCATAGGTTTGCATTGTGACACCACTGTTGCATCAACAAACAGCTCTTAGTGAAAACTATGGACCCAATTCATAATTCAGTCATGAAGCTGAATCAGCTGGCTGGTTGCAGCCAGAGGAAACGTCACGATGAGCAGTGAGGTCATGCCTGGAAAATCCTGAAAACCAGGTTGAAACTtgcctaaaaaaaacaaaaaaaaaaggttgaaaccTGCCAAGAAAAACAGGTGCAGTTGTATGACAGGAAGGACAAAGAGCAACTTTCATTTCAGTGCAATCTCTTCCGCTCTTCCAAAATGGTTATTTATATCTGTAGATGATATTTTGTAGATATTTTTGTACAGTGTTTTTTTACTACTGtatttaaactaaataaatatttaacaaaaatatga

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko04979 Cholesterol metabolism
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809530.1 False 620 mRNA 0.49 3 14274305 14276077
XM_039809531.1 True 1165 mRNA 0.42 2 14273629 14274893

Neighbor

gene id symbol gene type direction distance location
LOC120564658 NA coding downstream 21660 14245220 ~ 14251969 (-)
frmd4a frmd4a,LOC102793558 coding downstream 75506 14110466 ~ 14198123 (-)
terb1 terb1 coding downstream 183036 14079176 ~ 14090593 (-)
neto2b LOC103368211,LOC104965107 coding downstream 210886 14053952 ~ 14062743 (-)
LOC120563866 LOC100700167,LOC108229827,LOC102796952,LOC103368207,LOC106520317 coding downstream 227311 14039429 ~ 14046318 (-)
LOC120564472 hgf,LOC102789882 coding upstream 187282 14463359 ~ 14480786 (-)
LOC120563540 NA coding upstream 296654 14572731 ~ 14617358 (-)
LOC120563776 NA coding upstream 341214 14617291 ~ 14632303 (-)
sema3e sema3e coding upstream 366761 14642838 ~ 14667500 (-)
sema3ab sema3a coding upstream 407370 14683447 ~ 14708118 (-)
G84762 NA non-coding downstream 8643 14264725 ~ 14264986 (-)
G84761 NA non-coding downstream 9888 14263416 ~ 14263741 (-)
G84760 NA non-coding downstream 10514 14262703 ~ 14263115 (-)
G84752 LOC101063650,LOC106561215,LOC104965117 non-coding downstream 32575 14240521 ~ 14241054 (-)
G84751 LOC103368197 non-coding downstream 35178 14237582 ~ 14238451 (-)
LOC120564348 NA non-coding upstream 7819 14283896 ~ 14284962 (-)
G84776 NA non-coding upstream 89115 14365192 ~ 14365398 (-)
G84960 NA non-coding upstream 282381 14558458 ~ 14567269 (-)
LOC120564774 NA non-coding upstream 531334 14807411 ~ 14808068 (-)
G84971 NA non-coding upstream 575643 14851720 ~ 14852023 (-)
LOC120564470 NA other downstream 36677 14223197 ~ 14236952 (-)
zgc:77752 NA other downstream 235913 14031104 ~ 14037716 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other downstream 654843 13573831 ~ 13618786 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other downstream 888424 13325973 ~ 13385205 (-)
prr5a prr5,LOC103371545 other downstream 1017536 13246828 ~ 13256093 (-)
LOC120563775 cacna2d1,LOC104952157 other upstream 225819 14501896 ~ 14558228 (-)
si:ch1073-390k14.1 LOC103375950 other upstream 685783 14961860 ~ 14967783 (-)
G85014 ppp6r2,LOC103370604 other upstream 789962 15066039 ~ 15073350 (-)
ttc23 LOC104957250 other upstream 1196857 15472934 ~ 15484145 (-)
G85133 mef2a,mef2aa,LOC107553916 other upstream 1238701 15514778 ~ 15544082 (-)

Expression


Co-expression Network