LOC120564551 (LOC104940623,LOC103358310,LOC104963698,LOC106523659)


Basic Information

Item Value
gene id LOC120564551
gene name LOC104940623,LOC103358310,LOC104963698,LOC106523659
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 20604024 ~ 20610068 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809647.1
gagatagagagagaaagagagcgggaacaagggagagagaggagagcagagcGGGATATAGAGAGATACTTGGAGTGTGATGGTTTGCACTCCTATCTAGACAGTAAGGCAGGGAGGGAGCGCAACAGAGAGTTGGTGAGGTGAGTATTCACAAACCTGTCCATATGGATGGATAAGAAAAAAAGGGGGACAAACGGAGAAGAAAAAACTCACCAACATCCCTGTCAGGACTAATCTCTGTGGACTTTTTCTCTGTCTGGGAGGGAAAGAACATCTGTCAGTTGTGTGACCGTTGTATGTTCATCAATATTCAATCCCAATTCTTGGATTGCTGCTGGAGGGAGCAGAATATAAACCAGCTGTTTCAATCGGTCGACCTAGATTGTTGCAGAGCTGCAAGGAGAGGGGACAGCGTGGTGTATGGACCAGCTCCAAAGCATCAGTGTTTACCCTGCATGGTGAGCTCTGCTGTGTCTTGACGGGGCACTTATTGGTTTGATTTACAACACTAAGGTCACTCAGACAGAAAGATGTGGCATTGAAGGACAGACAGATAATGTATGCAACTCCTGCTACCTAAAGACCAATTCTTGTCTGGGATCTTTTTGCAAATCTACTGCAGGCTCTCTGATGAACTCACTCATACTGTACTACCTCATGAGGATGACCTTCTCCTGAATCACTGAATCAACCCCCCTTCCATGCACACATAAAAACTGGTGATCACAAATGTCTCAGTGATCACGTCATGGTGATTGGACACACATGGACTCACTAATAATCTGCTCTACTCACGCCATCTCCATTGAGGGTTCAGCATGTCGAGGGGCAAACTGGAGACCCGTGCTCGATTTTCATGTCAATGGCAGCTGGAACCAGGCGTACAGAGACTGATGAGAAAGGTGGAAAGTGAAGGCCTGTTCCATTAGTGCTCCCAGTGGGGACATGTGCCTAAACTCTGCCTGGACAAACTGACCTCCCTGGAAAGATTCTGGACATTACTATGGTGTACACTAAAGAATATACACAGCCGGCTAACAAACTCTGCCTCTTGGAGTAAAATCTAATGGATGcaactgtttttttgtgtttacagATCTGACTTTCTTTTCACGGaggacaaaaaagcaaaaagcaaGGATTTGGATCATTGTACTATGAGCAGTACATTCCAGCCCTGCGCAGGGGAAAGAgtctgtgtttctttgttttcgTGGTTGGATGGGTCTCTCCTGCCTGGGAATATCATGAGATTATAAACAGGAGGTGGCCCCGACATCTTATCCTTGTTCCACTCATCCATCAGAGCTCCCAACATCGCCAAAGCAAACAGACCAGAGATCGTAGAAAAAGTCTGTAGAGGACATTAGCATAATTATTCTCTAAAATCCACTGGGTGCAGGTGGCTGATTCTTTAGCTTTCTTACCATTAAGGTCGTGAAAAAAAGCTGGCAGCCCATTGACAGTCTTTAGCGAGACGGACAGGTGCTTTTCTGGCTGTCAGCCGCTCTGGGAGGGACTAGCAGTGAAAGGAAAAGCCTCGCTGGGGGGCTCTGCCTGAGCGGAAACACTTTTCCACTGGCTATGTTTAGAAGTGATGCTCGTCTCTGTGGATACAACATGGACTCTATGGCCTGATTACGCAGCCTTGGTATTCAGATAGTGCTGGAGGGAAGgGATAATGCATATCCTTCCCTGCCCGAAACAAGAAGCCACCATGAGCAACGTCACGGTCACCGACAACACTGAACCCATCAGTCGCACCATGAGTCCGGCAACCCCCAGCCCGTATCCCTATCCTGTCAGTTTCCAGGTCTCTCTGACTGGCTTCCTCATGCTGGAAATCCTCCTGGGAATGAGCTCTAACCTCACTGTGCTTGCACTCTACTGTATGAAGTCGAACCTCATTAGTTCCGTCAGTAACATCGTTACTATGAACCTCCATGTGTTGGATGTGCTAGTTTGTGTGTGCTGCATCCCCCTCACTATTGTGGTGGTGTTGCTCTCCTTGGAGGGAGACACTGCCCTCGTCTGCTGCTTCCATGAAGCCTGCGTCTCCTTTGCTAGTGTTGCCACTGCTGCTAATGTGCTTGCCATCACCCTTGATCGCTATGACATCTCGGTCAAACCAGCCAACCGGGTGCTGACAATGGGCCGTGCCCTGACCCTGCTGGCTGCCATTTGGGTACTGTCTTTTGTTAGTTTCCTCGTCCCCTTTATTGAGGTGGGCTTCTTCGCCCAGGGCCATGCTGATCTGAACCAGACAGTGGTGGAGAATGTGGTCCACACTAACCAGTACTATACAGAACTCGGCCTCTATTACCACCTGCTTGCTCAGATTCCTATTTTCTTCTTTACTGTCGTTGTCATGCTCATCACCTACTCAAAGATCCTGCAGGCACTCAATATTCGCATTGGCACACGTTTCCACGcttcacagaagaagaaggcTCGCAGGAAAAAGCGGCCATCCATGACAGCCATGACAACGCAGCAAGAGGCCACAGATGCATCCCAGAGCAGTGGCAGTCGCAACCCCACACTGGGAATGCGtacctctgtctctgtcatcATCGCCCTGCGTAGGGCTGTTAAGCGTCACAGAGAAAGGCGAGAGCGCCAAAAGAGGGTTTTCAGGATGTCCCTCCTGATTGTTTCTACCTTCCTGCTGTGCTGGACACCCATCACAGTGCTCAACACAGTTATCCTGAGTGTGGGCCCCAGTGACCTAATGGTCAAGTTGAGACTGGGCTTCCTGGTCATGGCTTATGGGACCACTATCTTTCACCCTCTACTCTATGCCTTTACTAGGCAGAAGTTTCAGAAAGTCTTGAAAAGCAAGATGAAGAAGCGAGTGGTGTCGATCATTGAGGCAGATCCTACCCCTAATAATGCCATTATCCACAACTCCTGGATTGACCCAAAGAGGaacaaaaaggtgacatttGAGGACAAAGATGCCCAACAAAAATGTCTGTCTTCTGAGGACGTGGAATGAAAGAACTCCTTATCTTTAAGGTCTACAGTCAATAAAAGCAGCTAAAACTGACATCAGGTCATGATGAAAAAGGGAAATGTTAATCCAAAGCAGTAATGTAAATATGTGCAATAGAATGTACAAAATCAAGAGGTGGATAATTTATTACTATTTATTGAGAACAAATGTAGGTTTcatatatacatcatatactgtactgtagataTTGCATGGCTTTTTGTAACGGTAGCAACATACAGTGCATTGTGTACATACATAATACATGTACAGCATAGGGTAAACAAGGTATATAAATAGAAAGAGAGATGTaggaattattatatatatgtatatttataataaatttTGTGTTCAGTCACCTAACACAGCAAAAGGCCTCCAATTCTCCCCTCCCCTAAGTAAAGTGTTTGTGATTCTGTAACAAATGTGAGATTACTCCCATTCATCACCATGCCACTTGGTCCCCAGTGACCACTGACCTTATTGCCTGTGAGCCCTCTGAGGgaaggtagacagacaggtcaaaCATGAAGAGACAGGCATGGAAAGGAAGTAGCAAAAGTAGTGTATGTTATGTTGCAATGGCCGAAAAGCTATGGGTGTACTGTTCACAATCACTGCTTTTAGAGTTAAAGATCAGTTGCATTCCACAGACACAACAGAAGACCATGGCTCTCATCACCTTGTTTGACATAAACCAGATGTAATCAAAGCCTAGTCTGTTTCCCTTTAACGGTCACATCTTTGAGCCAAATGGAAAATCTACAGTTGCCTTATTTTGGTTTAATGAATTGAGCATGAGTTTATGGTGGGACAGGGACTGTGACAGGGAGAGCACATATTGAacacaatgaaaaaaatataacaaatattgttttaattctAAAAGTGAATAGAATCCTCAGATGCTGTTTTCATAAAGACGTTATTTAATCaaactaaaagaaaatgttgaaaatggtTGTATTATCAAATTGTCTGTTTTTAATAATACTAGCTGAAAAACAATGCTCTCCAAATAAGCAAATCCATAACTGCAATAAAGAACTACTGCACAAATC

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 22

GO: NA

KEGG:

id description
K04319 GPR22; G protein-coupled receptor 22

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809647.1 True 4059 mRNA 0.45 3 20604024 20610068

Neighbor

gene id symbol gene type direction distance location
LOC120564552 LOC103358309,LOC104963723 coding downstream 7920 20590302 ~ 20596104 (-)
LOC120563518 plcz1,LOC104942417,LOC106523397,LOC108229959 coding downstream 310906 20275877 ~ 20293118 (-)
LOC120563522 NA coding downstream 346247 20256444 ~ 20257777 (-)
LOC120563520 NA coding downstream 347604 20255366 ~ 20256420 (-)
bncr NA coding downstream 348686 20252799 ~ 20255338 (-)
hbp1 hbp1,LOC108230206 coding upstream 65368 20675436 ~ 20686687 (-)
hsp90b1 hsp90b1,LOC102789166 coding upstream 76997 20687065 ~ 20708195 (-)
kcnd2 LOC104940628,LOC101467844,LOC102200463,LOC102788385,LOC100700816,LOC103358316 coding upstream 117073 20727141 ~ 20762189 (-)
LOC120564151 flnc,LOC103358317,LOC102787912,LOC102305697,LOC102200922 coding upstream 170639 20780707 ~ 20803875 (-)
LOC120563622 LOC103358318,LOC104940631 coding upstream 226622 20836690 ~ 20848727 (-)
G86686 NA non-coding downstream 142201 20402744 ~ 20461823 (-)
G86660 NA non-coding downstream 339818 20250890 ~ 20264206 (-)
G86652 reln non-coding downstream 362174 20241433 ~ 20241850 (-)
G86605 NA non-coding downstream 588212 20014338 ~ 20015812 (-)
G86575 lmo2 non-coding downstream 780651 19821540 ~ 19823373 (-)
G86761 NA non-coding upstream 88747 20698815 ~ 20699637 (-)
G86853 NA non-coding upstream 298321 20908389 ~ 20908590 (-)
G86976 NA non-coding upstream 492562 21102630 ~ 21103379 (-)
LOC120563411 NA non-coding upstream 530439 21140507 ~ 21146513 (-)
G87030 LOC103366871,LOC104946806,LOC106525492,LOC108230167 non-coding upstream 634942 21245010 ~ 21251759 (-)
G86638 NA other downstream 344765 20252639 ~ 20259259 (-)
cep152 cep152,LOC104960117 other downstream 1030336 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 1215449 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 1286546 19315385 ~ 19317478 (-)
LOC120564082 svip other downstream 1443537 19156758 ~ 19160487 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 196814 20806882 ~ 20829235 (-)
LOC120563850 NA other upstream 267600 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 759463 21369531 ~ 21372509 (-)
G87140 NA other upstream 1102974 21713042 ~ 21713554 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other upstream 1124938 21735006 ~ 21739344 (-)

Expression


Co-expression Network