LOC120564556


Basic Information

Item Value
gene id LOC120564556
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 32578557 ~ 32593826 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809655.1
ACTTAGCCATTTGTGCCATCTAGCGGTTAAATATTAAACTTGTACATAGCCTACTGAAGGAGCTTCTGTTTGGACGTGGGTTGTTCCACTGGTTGCTTTCTCCTGCGTGTCCACCCGCCTTTTATCAACTAAAGAAACGAAGTGGTTATTCAACGtcttttcattattttgtaTACATGGCTTCAATAAAAGAAAGAGCCGCGGCGTTAAACCTTGCAGAAAAACTGTGTGTGCCTCTTCAAGCTCATGGAGTGGCCAGTAAACCAGTCCAGTCTCCCTTAATTTGGAGTGGCCTCATCTCCCACCTCAGGTCTTCTGTGACAGTGAAACGTCGACGAGTCCACCTTAAGTCTCACAACGACTGTTTCTTCGGCTCAGAGGCTGTTGATGTGGTGGCAGAACACATCAGCTGTGTCAAAGTcttggaggGTGCCAATGTGTCACGGGACAAAGTGGCGTGTGTGTGCCAGGCTCTGTTGGACTGTAATGTGTTTGAGGCAGTGGGTACCAAAGTATTTGGCAAAGACAAGAAGCAAGATGTGTTTCAGGACAGCAAGAGTGCTCTTTACAGGTTTGTAGGTGTGTGTTCTCCTTCGGTCGATGAGTTGGAAAGAGGTTTGCTTGTGAAAGGGATCCAAAGACTCTTCTGCAGTGCTCCTTCAGACAGGCAGGAAGAGCAGACATGTCCTACTGGCTCACATGTTCAGATGTCAACCCCTGTCAAATGTACTCAGACATCCATAAAAGCCAACCAACTGGACACTCCTGCCACTGCCAGCCTGTCACTGGAGCCTCTGGTGGACAGTGTGAGTCCCAGCAGAGTGCTGACTGACACTGTTTTACCACAATCATTGGTAAACGAGGTATGGCAGGAGCAGACTCTGCTCAGGCTGTTAAACCTGGTGGAGCTCCCCCTCCTGGAAGCGGTGCTTCAATGCAGCCAGACCCCATCCCCTCCTCCAATTAACCTGCTGGCTCACAGTAACCCAGACCTGATCTACGGCAGCAACCACCTGGACAGGCAGATCATCAGGGCCTTCAGGGACTCTCAGGAGGATGAGTGGATCTGTGCAGCTCTGGACTGTCTGGACTTCCTTCCTGATCAGCCAGTGGTGGAGCTGAGCAGGGAGCTGCCGCACTGTTTCCCGCAAGATCAGGACAGCTGTGAGCAAGTGCGGTTGGTCTTCAAGAGCAAGACAAGAAACTGGTTGCAGTCTCTGAGGTATGTGTCCACCCCAGTCAACAACAGTGATGAGCAGCCTCCTCTCTCCCAGAGGGGTTTGGCCCAATGTAAGCTGCTGCTGTACGGGACCCTGGTGAAACATTACAGCCACGCAGACAGACTTCCACTGCTGCCCCAGTACATGACTGACATCTACACAGCCATCACTGACCTGCTGGGGAATGCTAAAATAGGCATAGCTCTTGAAGCTCTGCAGTTGTGTCTGAAGTTGCTGCCTTCTGGCTGCAGAGATGAGCTGCGCAAGCTGCTTACATTCATGGCTCTGGCAGCTGACGCGCAAGGGATACAACTGGACAAGGAGATGGAGAACAGACAGGCAGTGAAGAGGTCTTTCTCGAGGGCAATACTCTACAGCAGGGCTCTttcaaaagagaaagaggacctGATGGTGGTCTTCATACTCAGCAACATAAAGGACATTTTTAAGATACCAGGGGCTCTGCACAAAGGAGTGAGTGACAAGCTGGCCAGTCTTGTACAGGGGAAGCAGCCCGATGTGACTGGCTTTACGTTCTGTCAGCGTGTCTCCAGCAGGACTTGCGCTGACTCTACAAAGAAGACCACCAACCAGGAACTGTGGATTATGTTAAACAGCATCCACCTGGACACCAAGAGATCTGCCAAGGAGAAAAAGCGCCTACTTGGACAGTTTTATCAAGCCCACCCTGAGATATTTATCCAGTACTTTGGTGAATCTGCTGTTAATGTGCTGTAGTTTTGTGAAGACTATGACACAGTCtatatctctctttttctctctcttttacagtCAGTTTCAACAGTAGCTACTTTttgctttttacatttttggtaaATTGATTGTCTTTCAGACACAAGCTAACTGACTTAAGACATATTTGTGACTGACAATAAATCTTAGTGGAAATTTTAAAGATACCTCCAGCATATGATAGAGCTTGTAGGTGTGTATTTGCTTTATTGAagaagaacataaataaacagatgatatgtgttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809655.1 True 2220 mRNA 0.48 12 32578557 32593826

Neighbor

gene id symbol gene type direction distance location
LOC120564368 LOC107714737 coding downstream 5834 32570069 ~ 32572723 (-)
tcp11l1 tcp11l1,LOC102792814 coding downstream 15827 32552579 ~ 32562730 (-)
LOC120563339 NA coding downstream 29713 32495404 ~ 32548844 (-)
LOC120564289 LOC101470282,LOC100710380,LOC106676433 coding downstream 93844 32308330 ~ 32484713 (-)
LOC120564482 NA coding downstream 191773 32384364 ~ 32386784 (-)
ano10b LOC100712256,LOC102306304,LOC101466670,LOC108246906 coding upstream 168855 32762681 ~ 32781102 (-)
csnk2a2b csnk2a2 coding upstream 297277 32891103 ~ 32904758 (-)
pla2g15 LOC103379465 coding upstream 325627 32919453 ~ 32932296 (-)
lcat lcat,LOC103142508 coding upstream 338596 32932422 ~ 32943568 (-)
map1lc3b map1lc3b coding upstream 710888 33304714 ~ 33318901 (-)
G89395 NA non-coding downstream 267446 32310897 ~ 32311111 (-)
LOC120563490 NA non-coding downstream 306840 32271247 ~ 32271717 (-)
G89385 NA non-coding downstream 311542 32261973 ~ 32267015 (-)
G89369 NA non-coding downstream 394838 32180785 ~ 32183719 (-)
G89360 spon1,LOC108243468,LOC100710117 non-coding downstream 440940 32081393 ~ 32137617 (-)
G89522 NA non-coding upstream 268474 32862300 ~ 32862566 (-)
G89577 NA non-coding upstream 398263 32992089 ~ 32993049 (-)
G89586 NA non-coding upstream 404410 32998236 ~ 32998466 (-)
G89588 NA non-coding upstream 409267 33003093 ~ 33003625 (-)
G89589 NA non-coding upstream 423122 33016948 ~ 33017183 (-)
G89365 NA other downstream 470491 32106623 ~ 32108066 (-)
G89241 NA other downstream 1310088 31243168 ~ 31268469 (-)
G89085 NA other downstream 1856054 30722108 ~ 30722503 (-)
tspan9a tspan9,LOC103365760,LOC106534164,LOC101481610,LOC108237543 other downstream 4195842 28139286 ~ 28382715 (-)
LOC120564781 NA other downstream 4753596 27812245 ~ 27824961 (-)
fa2h fa2h,LOC106937201,LOC102797665,LOC107674969,LOC107707436,LOC107589178,LOC104955910,LOC107714073 other upstream 192972 32786798 ~ 32851495 (-)
znf319b znf319,LOC102797175 other upstream 312179 32906005 ~ 32913030 (-)
G89849 mmyhl2,mmyhl1 other upstream 1630435 34224261 ~ 34225516 (-)
G89870 LOC105899468,LOC106564289,LOC105009107,LOC106597831,LOC106591119,LOC103392864,LOC106597772 other upstream 1696977 34290803 ~ 34331996 (-)
G89873 LOC100698998,LOC102198497,LOC102789814,LOC102294989,LOC101481490 other upstream 1720705 34314531 ~ 34315143 (-)

Expression


Co-expression Network