LOC120564558


Basic Information

Item Value
gene id LOC120564558
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 5263469 ~ 5283349 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809657.1
ggaattgagccatcgttaaggttatcaatctcagctgtgcttttcctactatgacaagtcaataTGTCTGCTGTGGAAAATGTCCATAGCACATTAagtggaaacaggaagtggggaGCAGCAGAGGAAGTAGCTGAGAGCTACAGTTTTAGTTtcaccacagcacacacacacacacacacacacacacacacacacacacacacagcaacatatACCTGAGACTGAAAGCTTTCGTTGACATCCACTTACAGCTGGTCATGGACTGCATAGACCCCATCCTGTTAGCGGCCTCAACAATCTACAACCTGGTTGAGAACGTGAAGGCCAATAAGAAGCAATGCAAACGCGTTGGTGTCCGGGTCAAAGCACTGGAGCATGTGGTGAAGTCCATCAGAACGCTGAAACAGGGACAGACCTCTGCCGACGTAGAAAAAACCCTCCAGGAGCTCAAAACTACTCTGGACTCGGCAACGGTTGTCATCGAGAAATTCACTAAGTCCACCTGGGTGGACCGCGTCCTAAAATCCAGCAGCCACCAGGACGAGTTCCACAGTTTGAACGATCGCCTCAACGATGCCTTCCAGGTCCTTTCTTTAAATCTGGCCGTGGAGCAGAAGGAAATGCTGTTCAAGGTCTTTGACCAGACGTCCAGAGAGAAAGAAGATGAGGCGGACAGGAAGGAGGACAACACCGAGCTGGAGAGATTGCTCAAGGAGCATCACAAGGAGATGTTTGAGAAACTAGAAGCCATGCAGAGAGAAGTTGAATCCATCGGAGTCAACGTGGAAAAGATCGTGGCGAACTTGAAAAAGCCAAGCATCACTGAGGAAGCCATCCGAAAGATCAAACCAGACGAGCTGACCTACACTGATTTTCCCAAAGTGCCCTtcataaaaacagaaacatcagagGTGTACAAAGGAACGTACCGCCACTTCCCGGTGGCCATCAAGAGATACACTGAGACTCTGAACACCAGCGTAAGCACGGTGGAGAAGATTTTCAATAAGGAGGTTGAAACCATGAAGCGGTTTGAGTCACCCAACATCCTGCGAATGTTTGGCATCTGTGTGGACAAGCAGGGACCCAACCCTCAGTGCCTCCTCATCATGGAGTACTGTGAGATGGGAAATCTCCGTCAGGTTCTGGACGATAAAAAACTCACACTTTCCTGGACCATGAAAGCTCGTATGTGTCAGGGCGCGGCGCGCGGACTCTACCGGCTGCACCACACTGAAGACCAATCTAAGGTTCATGGATCCATCAACAGCAGCAAGTTCCTGGTGTCTGAAGGCTACGTAGTCAAGCTGGGAGGCTTTGAGCTGGCTAAAACTGAGACATCGctgaaaaagacaacaaaggcAAACGCGCACGGGTCTCTGGCCTACTCCTCTCCGCAGATGCTGCTCGACATCAACTACAAGTACAGTAAAGAGTGCGAGATTTACAGCTTTGGAATCGTCATGTGGGAAGTTGCGACCCGTAACAAACCTTATGAAGGTTGGTCAAATAAGGACTTCCTTGAGAAAGTGGGCAAACAGAAGTACCAGCAGCCGCTCCCTGACGACTGTCCTAAACCGCTGAGAGATCTGATCAACGCCTGTCTGGCCCACGATCGCTTTGAGAGACCATCCGCTGGAGAGCTGGTGGATAAACTGCAAACTGCATTGGAAAAGATAGAGGAGTGATAAAAGGCTTCATCCCTCGGCCTCTCCGTCAGCAGGACTCAGGGTTTCTGGTCAGGGACATCCTCAGGAGAAGAAATAAGACAAGATAACACAAGATGATATCCCTTTATTGTAATTGGATGATGCATACAATGAGATTCAGGTGTAGTACCTGAGACTGTGCTCAAAAAATACCTGTTGTCAACACATGCAtaaattaaaagattaaaagaggtgtgtgtgtgttacactgtTTTTAA
>XM_039809658.1
ggaattgagccatcgttaaggttatcaatctcagctgtgcttttcctactatgacaagtcaataTGTCTGCTGTGGAAAATGTCCATAGCACATTAagtggaaacaggaagtggggaGCAGCAGAGGAAGTAGCTGAGAGCTACAGTTTTAGTTtcaccacagcacacacacacacacacacacacacacacacacacacacacacagcaacatatACCTGAGACTGAAAGCTTTCGTTGACATCCACTTACAGCTGGTCATGGACTGCATAGACCCCATCCTGTTAGCGGCCTCAACAATCTACAACCTGGTTGAGAACGTGAAGGCCAATAAGAAGCAATGCAAACGCGTTGGTGTCCGGGTCAAAGCACTGGAGCATGTGGTGAAGTCCATCAGAACGCTGAAACAGGGACAGACCTCTGCCGACGTAGAAAAAACCCTCCAGGAGCTCAAAACTACTCTGGACTCGGCAACGGTTGTCATCGAGAAATTCACTAAGTCCACCTGGGTGGACCGCGTCCTAAAATCCAGCAGCCACCAGGACGAGTTCCACAGTTTGAACGATCGCCTCAACGATGCCTTCCAGGTCCTTTCTTTAAATCTGGCCGTGGAGCAGAAGGAAATGCTGTTCAAGGTCTTTGACCAGACGTCCAGAGAGAAAGAAGATGAGGCGGACAGGAAGGAGGACAACACCGAGCTGGAGAGATTGCTCAAGGAGCATCACAAGGAGATGTTTGAGAAACTAGAAGCCATGCAGAGAGAAGTTGAATCCATCGGAGTCAACGTGGAAAAGATCGTGGCGAACTTGAAAAAGCCAAGCATCACTGAGGAAGCCATCCGAAAGATCAAACCAGACGAGCTGACCTACACTGATTTTCCCAAAGTGCCCTtcataaaaacagaaacatcagagGTGTACAAAGGAACGTACCGCCACTTCCCGGTGGCCATCAAGAGATACACTGAGACTCTGAACACCAGCGTAAGGCTGCACCACACTGAAGACCAATCTAAGGTTCATGGATCCATCAACAGCAGCAAGTTCCTGGTGTCTGAAGGCTACGTAGTCAAGCTGGGAGGCTTTGAGCTGGCTAAAACTGAGACATCGctgaaaaagacaacaaaggcAAACGCGCACGGGTCTCTGGCCTACTCCTCTCCGCAGATGCTGCTCGACATCAACTACAAGTACAGTAAAGAGTGCGAGATTTACAGCTTTGGAATCGTCATGTGGGAAGTTGCGACCCGTAACAAACCTTATGAAGGTTGGTCAAATAAGGACTTCCTTGAGAAAGTGGGCAAACAGAAGTACCAGCAGCCGCTCCCTGACGACTGTCCTAAACCGCTGAGAGATCTGATCAACGCCTGTCTGGCCCACGATCGCTTTGAGAGACCATCCGCTGGAGAGCTGGTGGATAAACTGCAAACTGCATTGGAAAAGATAGAGGAGTGATAAAAGGCTTCATCCCTCGGCCTCTCCGTCAGCAGGACTCAGGGTTTCTGGTCAGGGACATCCTCAGGAGAAGAAATAAGACAAGATAACACAAGATGATATCCCTTTATTGTAATTGGATGATGCATACAATGAGATTCAGGTGTAGTACCTGAGACTGTGCTCAAAAAATACCTGTTGTCAACACATGCAtaaattaaaagattaaaagaggtgtgtgtgtgttacactgtTTTTAA

Function

GO: NA

KEGG:

id description
K08849 MLKL; mixed lineage kinase domain-like

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809657.1 True 1930 mRNA 0.48 11 5263469 5283349
XM_039809658.1 False 1693 mRNA 0.48 9 5263469 5283349

Neighbor

gene id symbol gene type direction distance location
rfwd3 rfwd3 coding downstream 5208 5231544 ~ 5258261 (-)
LOC120564005 NA coding downstream 40792 5168486 ~ 5222677 (-)
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding downstream 259265 4984680 ~ 5004204 (-)
LOC120564251 LOC103357242 coding downstream 338163 4912293 ~ 4925306 (-)
zgc:172145 NA coding downstream 572940 4681350 ~ 4690529 (-)
LOC120564561 NA coding upstream 9431 5292780 ~ 5307882 (-)
LOC120563745 NA coding upstream 127877 5411226 ~ 5417693 (-)
LOC120564748 NA coding upstream 141307 5424656 ~ 5428224 (-)
tmed6 NA coding upstream 161075 5444424 ~ 5447834 (-)
LOC120564012 NA coding upstream 164606 5447955 ~ 5465157 (-)
G82609 NA non-coding downstream 112257 5150981 ~ 5151212 (-)
G82607 NA non-coding downstream 117817 5145412 ~ 5145652 (-)
G82603 NA non-coding downstream 125152 5137436 ~ 5138317 (-)
G82600 NA non-coding downstream 131252 5131196 ~ 5132217 (-)
G82599 NA non-coding downstream 132372 5130775 ~ 5131097 (-)
LOC120564560 NA non-coding upstream 2522 5285871 ~ 5289540 (-)
G82669 NA non-coding upstream 312960 5596309 ~ 5605953 (-)
G82687 NA non-coding upstream 358448 5641797 ~ 5644736 (-)
G82689 NA non-coding upstream 371665 5655014 ~ 5691020 (-)
G82749 NA non-coding upstream 500122 5783471 ~ 5829244 (-)
urahb NA other downstream 251528 5004392 ~ 5011941 (-)
G82246 NA other downstream 985110 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 1095683 4076378 ~ 4167786 (-)
G82147 NA other downstream 1685085 3494391 ~ 3578384 (-)
G82122 NA other downstream 1882941 3380027 ~ 3380528 (-)
faap24 LOC102781697 other upstream 193875 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 1890673 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 2004546 7287895 ~ 7291427 (-)
met met other upstream 2455565 7738914 ~ 7832871 (-)
cav1 cav1 other upstream 2564716 7848065 ~ 7861228 (-)

Expression


Co-expression Network