cracr2aa (LOC103365762)


Basic Information

Item Value
gene id cracr2aa
gene name LOC103365762
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 28519058 ~ 28543251 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809674.1
CCCAGTCAGTCAGTGCTCAGTCAAATTCCTGCACTCACACCGGTTGACTTGTAAACAGTGAGGTTAACTACAAGCGGATAAGGCTGATACGGAGTACCAACGGAGACAATGAATTCCTCCAACCTGTCTCACTTTTCATTCACCGGTTTCCTCGACTAATTAAAGAGGCGGTTGCTAAGAGATGACAGTCTGTGACATTGGCGAGAGCCTCTGATGCTCGAGCAGCCTGAAGCTCGACTTCTCCGGGATCTCTTGCCTCCGCACCTCGGTCCGTACTGTACCTGGCTCGTGTGAAGGGCGCGGGGGAAACTCTCTCAAATCAACAGACATCACAAGTACCATGGCAGCTTTTCCTGCTCCCTGTGCCGCCACCATCACCACGGCCACCGCCGTGGCCCGAACTGCGCGGCAAAGGCAAGGAAGCAGCGGCGAGGCGGGCAAGCGCGAGAACTTGGACGTGGGACAAAACACTATCGTGGAGAAAACCCACGAGTTCTTCCAGATGTGTGACATGGAAAACAAGGGCTTCATCACCCGACGTGACATGCAGaggcTGAACACTGAGCTCCCTCTCAGTGCGGAGGAGTTGGAAAATGTGTTTGATACCCTTGATTCCGACGGCAACGAATACCTCACCCTCGAAGAGTTCTCCTCCGGCTTTATTGAGTTTTTATCCGGTCAGAAGATTTCTGTAGAAGAAGGCATGGCGGAGAAGAACCCCCGTAAAAGCCCGACCGAGGTCCTGTACCAGACCCAGTGGGAGGAGAGCCGGGCAAGAGAAGacgaggatgaggaggagaaacACTTTTGCATGCTCATGGAAAACCTCGGAGCCAACAGTGTCTTTGAGGATGCTGCTGAGGTGCGCAGTTTATGGGCCCAGGTGCGGCGAGATGAGCCTCACCTTTTATCCAATTTTGAGGACTTCCTGGCCAGAGTGACTTCCCAGATCATAGAGGCCAACCAGGAGAAGAGGGCGATGGAGAGCGCTCTCGAAAGGAAAGCAGCAACACACGATGATGAGATCCAGCGCCTTTATGTGGAAATGGAGcagcaaataaaaactgaaaaagacaGGATTGTGCTGCAGGACTACGCGCGCTTTCTGTCTCGCAGTCAAGACCTGGAGCTGCAGCTGTCCACTAAGGAGAAAGAGCTGGATCAGCTCTTTCAGAAGCAGAGAAGGTTGGAGCATCAGTGCCAGGAGCTTCAAAGTGAACAACACGTGGCCAAGGTGGAGAACGTGAAGCTGAAGCACACGAATGAGGAGTTGGCGCGGGAGCTGGACCACACCAGCCAGGAGCTGGCCTTGGCCCAGGACCAGCTGAGTCTGCTGCAGGAGCAGGCCACACAGCTTCACGAGGAGAAGGAGATTGAAATATACAGACTGACCGAGGGACTGCAGCGAGAGCGAGCCAGCCTCCTCAAACAACTGGACCTTCTGAGGGAAATGAACAAACACTTACGAGATGAAAAGGACATATGCAATCAGAATCCAAAGAATTCTAAGACAACAGCACATTTGAAGCAGAGGCCTTTGGTCAATGTTGTGAAACGCGCCAACCCAAATGTCTTCAGAAGtgaggatgaggaggagctgACCCCCAGCTCTGTGAGACACAACCTAGCCAATGGCTCAGGCCAGCCCTTTAGCCTGGCGGAAACCAGAGGGCACCTCCAGAGGATCATCTCCATTGAGGAGGACCACCTCCCACACTTGCTCCAGAACGACTGCCAGTCCCAAAGCCCACTGCAGGAGTGTAGTGAAGGAGAGGATTCCTCCGACAATGAGGAGGATATAGACTTGGTGATGAGCGATATTTGCCTGTGTGCGTCTTCTGCCCAGCAGCAGAAGTCGAAGGGAGATGTGGAGAAAAGGGAAACCCCCACATCTCCGAGGGTTCAGCCTGTTGGCAAGGAGACCAGCATACATGAGGAAGGTGGTCCGTCGCCGCCAGACCGCTTCTTCAAGATCGTCCTGGTGGGGAACTCCAGCGTAGGAAAGACCTCCCTCCTTAAGCGATTTTGTGACGACAGCTTCCATTCTGGCACTTCTGCCACTGTGGgTATAGATTACAGTGTAAAGACAATAGCTGTGGACAACAGCCAGGTGGCACTGCAGTTGTGGGATACAGCAGGACAGGAGAGATATCGGAGCATCACCAAGCAATTCTTTCGCAAGGCTGACGGCGTGGCCGTGATGTATGACATCACAGCCGAGCAGAGCTTCACTGCTGTCAGACAGTGGCTGACAAGTGTAAAGGAGGGAGCCGGCGAGGACATCCCGGTCATGCTCTTGGGAAACAAAACGGACAAGGAGATGGAGAGACAAGTTCAGAAAGAAGTGGGCGAAAGACTAGCCAagGACTGCCAAATGATTTTCTATGAGTGCAGCGCATGCTCCGGACACAACGTGGTGGAGTCCATGATTCATTTAGCCAGAATTCTGAAAGagcaggaggacagagagaaggagaagacGGTGCAGTTGTTCAGCAGCCCCTCGGAGAAGAAGAGATCCTGCTGCTAACAGTTGGGAcaccgctcacacacacacagcgtagCACTACCCTTCACTAAGATACACCGTGTGACAGTGTGACCACATGTACCACTAAGGATACATTATTCTGAATGTCAGCACAACTGTTTCTCACACGGTCTTCCTCTTCGTGGCACTCTGGGTAAACCCAACACCTGGATGGATGGACTGTACGTGATTGCACTATTATAAACTGTCTTCTCTACGTTTACCCAAGTAGTTTGAAAATAACCTCAAATTGTGGAGATAtagtgaaataataataatatgaaggAGAGTGTAAGAAAAGTTTGAGGAA
>XM_039809675.1
ATACAGTCCGCTTACTGACGTTACGTTAGTAGCGTTAAAAGTCTGCTCTTTGCTGGTGCTGTTAGCCTAACGGTTTCCTCGACTAATTAAAGAGGCGGTTGCTAAGAGATGACAGTCTGTGACATTGGCGAGAGCCTCTGATGCTCGAGCAGCCTGAAGCTCGACTTCTCCGGGATCTCTTGCCTCCGCACCTCGGTCCGTACTGTACCTGGCTCGTGTGAAGGGCGCGGGGGAAACTCTCTCAAATCAACAGACATCACAAGTACCATGGCAGCTTTTCCTGCTCCCTGTGCCGCCACCATCACCACGGCCACCGCCGTGGCCCGAACTGCGCGGCAAAGGCAAGGAAGCAGCGGCGAGGCGGGCAAGCGCGAGAACTTGGACGTGGGACAAAACACTATCGTGGAGAAAACCCACGAGTTCTTCCAGATGTGTGACATGGAAAACAAGGGCTTCATCACCCGACGTGACATGCAGaggcTGAACACTGAGCTCCCTCTCAGTGCGGAGGAGTTGGAAAATGTGTTTGATACCCTTGATTCCGACGGCAACGAATACCTCACCCTCGAAGAGTTCTCCTCCGGCTTTATTGAGTTTTTATCCGGTCAGAAGATTTCTGTAGAAGAAGGCATGGCGGAGAAGAACCCCCGTAAAAGCCCGACCGAGGTCCTGTACCAGACCCAGTGGGAGGAGAGCCGGGCAAGAGAAGacgaggatgaggaggagaaacACTTTTGCATGCTCATGGAAAACCTCGGAGCCAACAGTGTCTTTGAGGATGCTGCTGAGGTGCGCAGTTTATGGGCCCAGGTGCGGCGAGATGAGCCTCACCTTTTATCCAATTTTGAGGACTTCCTGGCCAGAGTGACTTCCCAGATCATAGAGGCCAACCAGGAGAAGAGGGCGATGGAGAGCGCTCTCGAAAGGAAAGCAGCAACACACGATGATGAGATCCAGCGCCTTTATGTGGAAATGGAGcagcaaataaaaactgaaaaagacaGGATTGTGCTGCAGGACTACGCGCGCTTTCTGTCTCGCAGTCAAGACCTGGAGCTGCAGCTGTCCACTAAGGAGAAAGAGCTGGATCAGCTCTTTCAGAAGCAGAGAAGGTTGGAGCATCAGTGCCAGGAGCTTCAAAGTGAACAACACGTGGCCAAGGTGGAGAACGTGAAGCTGAAGCACACGAATGAGGAGTTGGCGCGGGAGCTGGACCACACCAGCCAGGAGCTGGCCTTGGCCCAGGACCAGCTGAGTCTGCTGCAGGAGCAGGCCACACAGCTTCACGAGGAGAAGGAGATTGAAATATACAGACTGACCGAGGGACTGCAGCGAGAGCGAGCCAGCCTCCTCAAACAACTGGACCTTCTGAGGGAAATGAACAAACACTTACGAGATGAAAAGGACATATGCAATCAGAATCCAAAGAATTCTAAGACAACAGCACATTTGAAGCAGAGGCCTTTGGTCAATGTTGTGAAACGCGCCAACCCAAATGTCTTCAGAAGtgaggatgaggaggagctgACCCCCAGCTCTGTGAGACACAACCTAGCCAATGGCTCAGGCCAGCCCTTTAGCCTGGCGGAAACCAGAGGGCACCTCCAGAGGATCATCTCCATTGAGGAGGACCACCTCCCACACTTGCTCCAGAACGACTGCCAGTCCCAAAGCCCACTGCAGGAGTGTAGTGAAGGAGAGGATTCCTCCGACAATGAGGAGGATATAGACTTGGTGATGAGCGATATTTGCCTGTGTGCGTCTTCTGCCCAGCAGCAGAAGTCGAAGGGAGATGTGGAGAAAAGGGAAACCCCCACATCTCCGAGGGTTCAGCCTGTTGGCAAGGAGACCAGCATACATGAGGAAGGTGGTCCGTCGCCGCCAGACCGCTTCTTCAAGATCGTCCTGGTGGGGAACTCCAGCGTAGGAAAGACCTCCCTCCTTAAGCGATTTTGTGACGACAGCTTCCATTCTGGCACTTCTGCCACTGTGGgTATAGATTACAGTGTAAAGACAATAGCTGTGGACAACAGCCAGGTGGCACTGCAGTTGTGGGATACAGCAGGACAGGAGAGATATCGGAGCATCACCAAGCAATTCTTTCGCAAGGCTGACGGCGTGGCCGTGATGTATGACATCACAGCCGAGCAGAGCTTCACTGCTGTCAGACAGTGGCTGACAAGTGTAAAGGAGGGAGCCGGCGAGGACATCCCGGTCATGCTCTTGGGAAACAAAACGGACAAGGAGATGGAGAGACAAGTTCAGAAAGAAGTGGGCGAAAGACTAGCCAagGACTGCCAAATGATTTTCTATGAGTGCAGCGCATGCTCCGGACACAACGTGGTGGAGTCCATGATTCATTTAGCCAGAATTCTGAAAGagcaggaggacagagagaaggagaagacGGTGCAGTTGTTCAGCAGCCCCTCGGAGAAGAAGAGATCCTGCTGCTAACAGTTGGGAcaccgctcacacacacacagcgtagCACTACCCTTCACTAAGATACACCGTGTGACAGTGTGACCACATGTACCACTAAGGATACATTATTCTGAATGTCAGCACAACTGTTTCTCACACGGTCTTCCTCTTCGTGGCACTCTGGGTAAACCCAACACCTGGATGGATGGACTGTACGTGATTGCACTATTATAAACTGTCTTCTCTACGTTTACCCAAGTAGTTTGAAAATAACCTCAAATTGTGGAGATAtagtgaaataataataatatgaaggAGAGTGTAAGAAAAGTTTGAGGAA

Function

NR:

description
ras and EF-hand domain-containing protein homolog isoform X1

GO: NA

KEGG:

id description
K17199 RASEF, RAB45; Ras and EF-hand domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809674.1 True 2840 mRNA 0.52 18 28519058 28543251
XM_039809675.1 False 2767 mRNA 0.52 18 28519058 28543081

Neighbor

gene id symbol gene type direction distance location
tspan33b LOC104940279,LOC100694777,LOC101482493,LOC106573176,LOC105926564 coding downstream 326398 28176802 ~ 28192660 (-)
tbxas1 tbxas1 coding downstream 707978 27799006 ~ 27811080 (-)
ccdc113 NA coding downstream 728084 27786672 ~ 27790974 (-)
LOC120564488 LOC101485419,LOC102777949,LOC104949269,LOC102291458,LOC100702099 coding downstream 843200 27673598 ~ 27675858 (-)
uri1 NA coding downstream 849586 27655464 ~ 27669472 (-)
utp4 utp4 coding upstream 416139 28959390 ~ 28974789 (-)
has3 has3 coding upstream 445704 28988955 ~ 29018749 (-)
tango6 tango6 coding upstream 481026 29024277 ~ 29067687 (-)
c8h11orf49 LOC104936424,LOC102313439 coding upstream 742465 29285716 ~ 29295960 (-)
LOC120564361 LOC103374757 coding upstream 812063 29355314 ~ 29363745 (-)
G88513 NA non-coding downstream 536764 27975965 ~ 27982294 (-)
G88510 NA non-coding downstream 543397 27975181 ~ 27975661 (-)
G88467 NA non-coding downstream 819123 27699620 ~ 27699935 (-)
G88405 NA non-coding downstream 1094423 27420437 ~ 27424635 (-)
G88391 selenoo non-coding downstream 1141040 27376859 ~ 27378018 (-)
G88613 NA non-coding upstream 249461 28792712 ~ 28792984 (-)
G88625 zc3h18,LOC102790709 non-coding upstream 314220 28857471 ~ 28940229 (-)
G88636 NA non-coding upstream 344753 28888004 ~ 28889684 (-)
G88706 NA non-coding upstream 547779 29091030 ~ 29093595 (-)
G88709 NA non-coding upstream 555018 29098269 ~ 29098610 (-)
tspan9a tspan9,LOC103365760,LOC106534164,LOC101481610,LOC108237543 other downstream 136343 28139286 ~ 28382715 (-)
LOC120564781 NA other downstream 694097 27812245 ~ 27824961 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other downstream 868996 27623990 ~ 27650062 (-)
G88379 panx2 other downstream 1163282 27354972 ~ 27355776 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other downstream 1289686 27223962 ~ 27229372 (-)
G89085 NA other upstream 2178857 30722108 ~ 30722503 (-)
G89241 NA other upstream 2699917 31243168 ~ 31268469 (-)
G89365 NA other upstream 3563372 32106623 ~ 32108066 (-)
fa2h fa2h,LOC106937201,LOC102797665,LOC107674969,LOC107707436,LOC107589178,LOC104955910,LOC107714073 other upstream 4243547 32786798 ~ 32851495 (-)
znf319b znf319,LOC102797175 other upstream 4362754 32906005 ~ 32913030 (-)

Expression


Co-expression Network