LOC120564582


Basic Information

Item Value
gene id LOC120564582
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 3117852 ~ 3122591 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809712.1
TTTCCTGAAAGTTGAAAGTAAAACTGTCTGAGCGACGGCAAGAGCTGCAGTCGAGTcaagtctctctgtttctctctaaGGAAACATCCAACTGAGCAGCAGAATCTCTCCTAACACTGAGTGTCGATATGTCTGCTGCCAGCAGTCTGCTGACTGAAGATCAGTTTCTctgctccatctgtctggatgtgttcactgatccAGTCAGCACACCTTGTGGACACAACTTCTGTAAAGCCTGCATCACTAAACACTGGGATATTGATGTTCCCTATCAGTGTCCCAACTGTAGAGAGGTTTTCAACACGAAACCTGAGCTAGAGGTCAATACTTTGATCTTTGAGATGGCTGCTAAGTTCAGACAGTCAATTCAacagaaagccagcagcagctcagagcaacaagtgtccaaacCAAAAGAAGTTCCCTGTGACGTATACTCAAGAACCAAAAGAAGGACCTGGATGTTCTTCcttgtgtgtctgctgtgtgtcttCATGACCTGGATGGTTTCAGACCAAAAGAAACATCTTGTTGGTCCTCAGAACGAAGAATATGAAGCAAAGAAAGCTGAGCTGTGGAAGACAGGGGCTGAAATCCAGCAGGTGATACAGGAAAGACGACTGAAGATTCAGGAGATCAAACATTTAGTGGAGATCAGTGAtgaagatgcagacagagagatagcagaaggtgttcagGTCATCACTGCTCTGAAGGACTCTGTTGAGAGAAGCCTGGCCGAGCTAATCGAGATGATCCAAGAGAAGAAGAGATCGACAAAGCAACCAGCTGAAGGCTTCATCACagagctggaacaggaaatctctgagctgcagaagagaagcactgaggtggagcagctcTTACAGTCTGAAGAACACCAACACCTCCTCCAGAGCTTCACCTCCATGAACGCTGTTCCACCCACCAAGGACTGGACAGAAGTCAACGTCCGTCCACCTTCATATGAGGGGTTTGTGAGGAGAGCTGTGACTCAGCTGGAAGAGACACTCAGTGAACAGATGAAGAAGCTGTTTCGGGTCGAGCTGAAGAGGTTCCAGCAGTCtgcagtggatgtgactcttgatcctgatacagcaCATTCTAatctcatcctgtctgatgatGGGAAACAAGTACATGATAGTGATGTGAGGAAGAATCTCCCAGACAATCCAAAGAGATTCTTTAACTATGTTTTTGTCTTAGCAAAGCAGAGTTTCTTTTCAGGAAGATTTTATTATGAGGTTCAGGTTAAAGGAAAGACTGCGTGGACTTTAGGAGTGGCCAGAGAGTCGGTCAACAGGATGGTAAGTACTCTACCGACTCCTCAGGATGGTTACTGGGCGATATGGTTGAGGAATGACAATGACTACCTCGCTCTTGATGACCATAcagtccttctctctctgaagtctcagcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgatgttgatgctgaagctcttatctactcctttactggctgctccttcactgagaaactctacCCATTCTTCAGTCCCGAACCTAACTATGGTGGTAAAAACTCTGCccctctgatcatctctcctgtcagTCACTGAGTAGAACAACCATTTGGTTTTCTAGATTCACTTTCATTTAATGTAATGAATGTGTATTTACTGGTGATGTtcgatgtacagtacaggccaaaagtttggacacaccttctcattcaatgcatttcctttttattttcatgactatttacattgtagattcacact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809712.1 True 1781 mRNA 0.45 2 3117852 3122591

Neighbor

gene id symbol gene type direction distance location
LOC120564583 NA coding downstream 9653 3107090 ~ 3108199 (-)
mphosph6 mphosph6 coding downstream 393883 2708516 ~ 2723969 (-)
LOC120563454 NA coding downstream 750562 2366330 ~ 2367290 (-)
LOC120563451 NA coding downstream 759764 2357170 ~ 2358088 (-)
LOC120563453 NA coding downstream 785373 2330224 ~ 2332479 (-)
rxfp3.3b LOC101063184,LOC103379777,LOC104955911,LOC100691599 coding upstream 48180 3170771 ~ 3173157 (-)
ciao2a fam96a coding upstream 299695 3422286 ~ 3436305 (-)
znf277 znf277 coding upstream 487820 3610411 ~ 3630815 (-)
lrrn3a lrrn3,LOC104963257 coding upstream 676986 3799577 ~ 3825591 (-)
LOC120564132 NA coding upstream 788453 3911044 ~ 3969786 (-)
G81886 NA non-coding downstream 46923 3070561 ~ 3070929 (-)
G81882 NA non-coding downstream 62273 3054539 ~ 3055579 (-)
G81874 NA non-coding downstream 63493 3026508 ~ 3054359 (-)
G81836 NA non-coding downstream 156203 2961395 ~ 2961649 (-)
G81814 NA non-coding downstream 269878 2847604 ~ 2847974 (-)
G81901 NA non-coding upstream 16875 3139466 ~ 3139768 (-)
G81903 NA non-coding upstream 22315 3144906 ~ 3145296 (-)
G81906 NA non-coding upstream 27911 3150502 ~ 3150702 (-)
G81910 NA non-coding upstream 32788 3155379 ~ 3155611 (-)
LOC120564457 NA non-coding upstream 144750 3267341 ~ 3268313 (-)
fem1b fem1b,LOC102786726 other downstream 49931 3056539 ~ 3067921 (-)
G81832 NA other downstream 179862 2937752 ~ 2937990 (-)
LOC120563733 NA other downstream 298439 2752238 ~ 2819413 (-)
G81738 NA other downstream 432612 2684898 ~ 2685240 (-)
G81726 LOC106531021,LOC102237407,LOC103130839,LOC107099816,LOC101479225,LOC103365994,LOC107389108,LOC106938894,LOC106907116,LOC103466381,LOC101173933 other downstream 439339 2670315 ~ 2678513 (-)
G82122 NA other upstream 257436 3380027 ~ 3380528 (-)
G82147 NA other upstream 371800 3494391 ~ 3578384 (-)
LOC120564247 NA other upstream 953787 4076378 ~ 4167786 (-)
G82246 NA other upstream 1154229 4276820 ~ 4278359 (-)
urahb NA other upstream 1881801 5004392 ~ 5011941 (-)

Expression


Co-expression Network