malt3 (LOC104964024,LOC103357518,LOC102077990)


Basic Information

Item Value
gene id malt3
gene name LOC104964024,LOC103357518,LOC102077990
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 16766929 ~ 16776366 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809729.1
TATGCGTACGCTTGTGGCACGACTTTTAGACTCGCTCTCATTTCCTACCTGTTGGAGTGCTACCTGTGGACCTGCTCTCTGTTCCGTCTGTTGGATTTTGTATAATGAAGTTCAACTTCACTTACCTCCATCCTGACTCCTGCTCCTTCCGTGACAGTTCTTGAGTTGTTGATGGCCTACCAAAGCTGAGAGACTCTTTTTGTTCTACGAGATGCTCCCATATTATAGGCTTACAGGTAGTGTATGTGTACGCTGTCTCATTCCGGGAAAGGGAAGTTGTCGATATAATTTAAGTTATGAAGAATGAAATGAGGAAAACATACACTGCCTGAGGTCCGACAGCTGCTCAACGCGTATAAGGCTGACGGCAGTCTGttataagaagaagaaaatgcaCTGATGACTGCATTCCGCACCAAACCCTGTCAAATAATGATCGGAGAAATTCTCATAGTTCGCCAtcctttttctgtgtgtgtacctgtggacCATAAGGTGACCCTGAGTGTCCGTGCTGAGGGCACAGGTATCCTCAACTACCAGTGGTTCACTGATGAAAAGGAGGTGTCTGGAGGCACTGAAGCAGACTTGACCATTAAAGCTAAAAAAACTAAGCTCTATGTGTGCCGTGTGAATGATCACTTTTGTAACTGCGTGTTCAGCGACTGGGTGAAAGTCAAGGTGTTGGACATTGATAAATCAGgGCTGCCAGTATACTGGCAGGGTGAGCCACACATCGCAGTCAATCCTAAACCCCAAACAGTCCGACAAGGGTCAAAACTCACTCTCCGCTGCGCTGCCTTTGGCATTCCTGCTCCAAACTATCAGTGGTACAGAAATGGACAGCCGCTGCTGGACAAGACTAGTGACATGCTGCAGATTGACCGTGCAACAGTCGAACATGGAGGATCATACCTGTGCTCCATATCTAACGTGCTAGAAGAGACATGGACTGAACCAGTCAATGTTGACATTGTGCAAACTGCTCAGCTTCCTCCTGCAGTACCCACAGCCACTGATAAAGTCGCCCTACTTATTGGCAACCTGAATTACTCCAACCACCCTGACTTAATGGCCCCCATTATGGATGTGCATGAGCTGGCCAACCTCCTGCAGCAGCTCGGCTTCAGAGTGGTTTCTCTGCTGGATCTCACCAGGGAGGAGATGCTGGCTGCTATTGACAAGTTCATGCAGCTCCTTGACAGAGGAGTTTATGGCCTTTTTTACTACGCGGGTCATGGATATGAGCATGCTGGTAGGAATTACTTGGTGGCTGTTGATGCTCCACAACCGTATCGACCTgaaaactgtgtctgtgtgcagaggGTCATGCTCAGCATGCAGGAAAGACGGACTGCACTGAGTGTTATCCTGTTGGATACCTGTAGAAAATGGTACAACCAGGATTGCATTCCTTCAGGCATCATGCCATTGGGACCCAGTGGGAACACTGTTTACGGTTATGCCACATGTGAAGATGCTGAGGCGTTTGAGGTCCAGGACGGGGGGAAAAGTACTGGAATCTTCACGAAGTACTTGAATGCGCACATCCTGCAGACTGAGAAAGTCACACATGTTTTAGAAAAGGTGTCTGAGGATCTAGGCCGAGACCCTCTAGTCACAGGCAAGCAGCAAGTGGAGATCAAACACACCCTGAAGGAACCTCGATCCCTTGCAGACCCAGTACGGACCACTGGCCATACAAGGGAGCTTCACCTGCGAGATGCCTGCTGGAGACAAGCAAATGAGCTACCACGGAAGAAGCAGCTGAAGTTTGTTTGCGGAGTAGAAGTGGAAGTCAGCTTCTCAGCTTTGTTCTCTAATGTCTTGGTGGCTTTTGCCACTGTAAAGACTACAGGCCCCCGAAACCAGGACTGCACTGTCACCCTGAGTAGCATACCTCCAATACAAGACATATTTTCCGGCCCTGGCAGGTCAGAGGAGATGGACTCTCTACTATTTAAGACATCTGATAACCCAGACTGTACTCTGCGACTTTGTGCTCTTCAAAAGCTTACGGAATCGCTGGTGATCAAGGTGGATCTACACTATACTCACATGGACAGTAAGCTACGCCAGACAGAAAGCCAACAGGTGGACATAGGAAAGCCTCTGGTGGCATCCTGTAAATTGCACAGGAGGAGTCATGCAACAACAATCAAGAAACAAGAAGGCGCTTCTGCTCAAAGTATGGGCAACATTTCAAGCAGCAAACCACAGCTGCATCAGACTCTGGCTGGTCCGTGTCGCCCTTTCACCAGAAAGGCAGTGTGTGCTGCTAAAGTTGCAGTTACATGGAGCAACGAACCTGAAGAGAATGATGAAAATGAACTGCAAGACTTCACTCTCCGACATTAAATCTTTTCGGTGCTATTGTAAATACTTGTTTGGAAATGTGATGCTTTTTACTGATTTGATTAGAAATTACTCCTTAGTTCCTGATCATACATCTTGTGtgtgattgatgatgatgatgatgaatgagTGAGGTTTGTTTGGTTTGCATTACCAGTCTTTAATGCTTAGCTCAACACTGAAGAAACATTAACACTTACTTTTGCTAACCACTGATTTCATCATAAATTGTATAATACTTAAAGAGACATATTACTTTTTATCAGTGCCAAGCTGGTTAGCCTAATTTATCAAATAACGACCATTATGGTTAATAATTTATCTAATAAAGACCACTacttttatcactattttaa
>XM_039809730.1
TATGCGTACGCTTGTGGCACGACTTTTAGACTCGCTCTCATTTCCTACCTGTTGGAGTGCTACCTGTGGACCTGCTCTCTGTTCCGTCTGTTGGATTTTGTATAATGAAGTTCAACTTCACTTACCTCCATCCTGACTCCTGCTCCTTCCGTGACAGTTCTTGAGTTGTTGATGTCTGttataagaagaagaaaatgcaCTGATGACTGCATTCCGCACCAAACCCTGTCAAATAATGATCGGAGAAATTCTCATAGTTCGCCAtcctttttctgtgtgtgtacctgtggacCATAAGGTGACCCTGAGTGTCCGTGCTGAGGGCACAGGTATCCTCAACTACCAGTGGTTCACTGATGAAAAGGAGGTGTCTGGAGGCACTGAAGCAGACTTGACCATTAAAGCTAAAAAAACTAAGCTCTATGTGTGCCGTGTGAATGATCACTTTTGTAACTGCGTGTTCAGCGACTGGGTGAAAGTCAAGGTGTTGGACATTGATAAATCAGgGCTGCCAGTATACTGGCAGGGTGAGCCACACATCGCAGTCAATCCTAAACCCCAAACAGTCCGACAAGGGTCAAAACTCACTCTCCGCTGCGCTGCCTTTGGCATTCCTGCTCCAAACTATCAGTGGTACAGAAATGGACAGCCGCTGCTGGACAAGACTAGTGACATGCTGCAGATTGACCGTGCAACAGTCGAACATGGAGGATCATACCTGTGCTCCATATCTAACGTGCTAGAAGAGACATGGACTGAACCAGTCAATGTTGACATTGTGCAAACTGCTCAGCTTCCTCCTGCAGTACCCACAGCCACTGATAAAGTCGCCCTACTTATTGGCAACCTGAATTACTCCAACCACCCTGACTTAATGGCCCCCATTATGGATGTGCATGAGCTGGCCAACCTCCTGCAGCAGCTCGGCTTCAGAGTGGTTTCTCTGCTGGATCTCACCAGGGAGGAGATGCTGGCTGCTATTGACAAGTTCATGCAGCTCCTTGACAGAGGAGTTTATGGCCTTTTTTACTACGCGGGTCATGGATATGAGCATGCTGGTAGGAATTACTTGGTGGCTGTTGATGCTCCACAACCGTATCGACCTgaaaactgtgtctgtgtgcagaggGTCATGCTCAGCATGCAGGAAAGACGGACTGCACTGAGTGTTATCCTGTTGGATACCTGTAGAAAATGGTACAACCAGGATTGCATTCCTTCAGGCATCATGCCATTGGGACCCAGTGGGAACACTGTTTACGGTTATGCCACATGTGAAGATGCTGAGGCGTTTGAGGTCCAGGACGGGGGGAAAAGTACTGGAATCTTCACGAAGTACTTGAATGCGCACATCCTGCAGACTGAGAAAGTCACACATGTTTTAGAAAAGGTGTCTGAGGATCTAGGCCGAGACCCTCTAGTCACAGGCAAGCAGCAAGTGGAGATCAAACACACCCTGAAGGAACCTCGATCCCTTGCAGACCCAGTACGGACCACTGGCCATACAAGGGAGCTTCACCTGCGAGATGCCTGCTGGAGACAAGCAAATGAGCTACCACGGAAGAAGCAGCTGAAGTTTGTTTGCGGAGTAGAAGTGGAAGTCAGCTTCTCAGCTTTGTTCTCTAATGTCTTGGTGGCTTTTGCCACTGTAAAGACTACAGGCCCCCGAAACCAGGACTGCACTGTCACCCTGAGTAGCATACCTCCAATACAAGACATATTTTCCGGCCCTGGCAGGTCAGAGGAGATGGACTCTCTACTATTTAAGACATCTGATAACCCAGACTGTACTCTGCGACTTTGTGCTCTTCAAAAGCTTACGGAATCGCTGGTGATCAAGGTGGATCTACACTATACTCACATGGACAGTAAGCTACGCCAGACAGAAAGCCAACAGGTGGACATAGGAAAGCCTCTGGTGGCATCCTGTAAATTGCACAGGAGGAGTCATGCAACAACAATCAAGAAACAAGAAGGCGCTTCTGCTCAAAGTATGGGCAACATTTCAAGCAGCAAACCACAGCTGCATCAGACTCTGGCTGGTCCGTGTCGCCCTTTCACCAGAAAGGCAGTGTGTGCTGCTAAAGTTGCAGTTACATGGAGCAACGAACCTGAAGAGAATGATGAAAATGAACTGCAAGACTTCACTCTCCGACATTAAATCTTTTCGGTGCTATTGTAAATACTTGTTTGGAAATGTGATGCTTTTTACTGATTTGATTAGAAATTACTCCTTAGTTCCTGATCATACATCTTGTGtgtgattgatgatgatgatgatgaatgagTGAGGTTTGTTTGGTTTGCATTACCAGTCTTTAATGCTTAGCTCAACACTGAAGAAACATTAACACTTACTTTTGCTAACCACTGATTTCATCATAAATTGTATAATACTTAAAGAGACATATTACTTTTTATCAGTGCCAAGCTGGTTAGCCTAATTTATCAAATAACGACCATTATGGTTAATAATTTATCTAATAAAGACCACTacttttatcactattttaa

Function

NR:

description
mucosa-associated lymphoid tissue lymphoma translocation protein 1-like

GO: NA

KEGG:

id description
K07369 MALT1; mucosa-associated lymphoid tissue lymphoma translocation protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809729.1 True 2711 mRNA 0.46 16 16766929 16776366
XM_039809730.1 False 2514 mRNA 0.46 15 16766929 16776366

Neighbor

gene id symbol gene type direction distance location
ankrd34c ankrd34c coding downstream 156026 16607362 ~ 16610903 (-)
idh2 idh2,LOC104917827,LOC105932345,LOC107100590,LOC103147849,LOC103466626 coding downstream 172743 16581508 ~ 16594186 (-)
sema4ba sema4b,LOC103368553,LOC100693140,LOC101470126 coding downstream 217905 16462555 ~ 16549024 (-)
LOC120563779 NA coding downstream 234488 16529442 ~ 16532441 (-)
zgc:162879 LOC104964034,LOC103368560,LOC100692867 coding downstream 305697 16452033 ~ 16461232 (-)
slc28a1 slc28a1,LOC108230093,LOC106514348 coding upstream 15788 16792154 ~ 16803322 (-)
si:dkey-24l11.2 LOC104946603 coding upstream 43948 16820314 ~ 16830164 (-)
pstpip1a pstpip1,LOC102789492 coding upstream 58966 16835332 ~ 16842414 (-)
rcn2 rcn2,LOC102789787 coding upstream 64743 16841109 ~ 16846133 (-)
isl2a isl2,LOC102787860,LOC102305078,LOC101486127,LOC102207021 coding upstream 137171 16913537 ~ 16918273 (-)
G85373 ctsh non-coding downstream 84041 16680151 ~ 16682888 (-)
LOC120564211 NA non-coding downstream 107613 16649841 ~ 16659316 (-)
G85361 rasgrf1,LOC108230026,LOC106514342,LOC106921433,LOC103147845,LOC101158694 non-coding downstream 111175 16654938 ~ 16655754 (-)
G85353 NA non-coding downstream 139980 16626731 ~ 16626949 (-)
G85332 NA non-coding downstream 212118 16554036 ~ 16554811 (-)
G85428 NA non-coding upstream 7932 16784298 ~ 16787982 (-)
G85436 NA non-coding upstream 32916 16809282 ~ 16809502 (-)
G85441 NA non-coding upstream 34708 16811074 ~ 16816147 (-)
G85453 scaper,LOC102788151,LOC107662441,LOC107688925 non-coding upstream 90761 16867127 ~ 16869163 (-)
G85460 scaper non-coding upstream 121318 16897684 ~ 16899795 (-)
trnah-gug_10 NA other downstream 2143 16764715 ~ 16764786 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other downstream 3211 16697095 ~ 16763718 (-)
G85321 NA other downstream 325964 16439374 ~ 16440965 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other downstream 557743 16188853 ~ 16209186 (-)
chd2 chd2 other downstream 579593 16155984 ~ 16187336 (-)
G85435 NA other upstream 31690 16808056 ~ 16808416 (-)
fbxl22 fbxl22 other upstream 849645 17626011 ~ 17645520 (-)
ppcdc ppcdc other upstream 1085347 17861713 ~ 17877065 (-)
dennd4a dennd4a other upstream 1117487 17893853 ~ 17956629 (-)
trnaq-cug_6 NA other upstream 1150681 17927047 ~ 17927118 (-)

Expression


Co-expression Network