avpr1aa (LOC103358863,LOC100711102)


Basic Information

Item Value
gene id avpr1aa
gene name LOC103358863,LOC100711102
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 23551853 ~ 23556076 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809914.1
ACAACTCGGAGACCAACGGGTTCCTCTCTGTGAGCATCACGCACAGTAGCTCCATATATGTAGCGGCACCTCGCAGCCCCTCTGGCACTGTATCTGCTAGGGCGCGCGCAGGGACAGTGCCATGCACACTCCTGACTATGAGTTTCTGAGCGGTGGGAACCAGTCTCTGGGTTTCAGTCCCTTTAATGACCGAACAATGGAAACGCTCGGAAACAACACCGTCCACCCGAATGGATCCGATCCGTTTGCGCGAAACGAAGAAGTGGCCCAAATCGAGATAATGGTCCTGAGCATCACCTTCGTGGTTGCTGTGATTGGGAATGTGAGCGTCCTGCTGGCAATGTACAACACTAAGAAGAAGATGTCGCGGATGCACCTTTTCATCAAACACCTCAGCCTGGCTGACCTGGTGGTCGCCTTCTTCCAGGTGCTGCCGCAGCTCTGCTGGAAGATCACCTTCCGCTTCTACGGTCCGGACTTTTTCTGCAGGATAGTCAAGCACCTACAGGTGATGGGGATGTTTGCGTCCACCTacatgatggtgatgatgaccCTGGACCGTTACATTGCCATCTGCCACCCTCTGAAAACCCTCCagcagcccaccaagcgctccTACATCATGATCATCTCCACGTGGATATGCAGCCTGGTGTTCAGCACTCCGCAGTACTTTATCTTCTCCCTTAGCGAGATCCAGAACGGCTCGAACATTAACGATTGCTGGGCGCACTTTATCGAGCCGTGGGGCGCCAAGGCGTACATCACCTGGATAACTGTGGGCATCTTTCTCGTGCCCGTGGTAATTCTCATGATGTGCTACGGATTCATCTGCCACAGCATATGgaaaaatatcaaatataaGAAAAGGAAATCGACGGATGGTGTTGCGAACAAGAACGGGCTGATTGGGAAGAATTCAGTCAGCAGCATTACAACTATATCAAGAGCCAAACTGAGGACTGTTAAGATGacttttgtgattgttttggcGTACACTGTTTGCTGGGCTCCGTTTTTCACAGTGCAGATGTGGTCGGTGTGGGATGAAAACTTTCAGTGGGCTGATTCTGAGAACACAGCAGTGACTCTGTCTGCACTCCTTGCCAGTCTCAACAGCTGCTGTAACCCGTGGATATACATGGTCTTCAGCGGCCACCTCCTCCAGGATTTTGTGCACTGCCTCTCTTGCTGCCTCAAAATGAACCCTGACTTCAAGAAGGAGGACTCAGACAGCAGTCTCCGCAGAACAACATTGCTGACAAAGATGGCCAATCGGAGCCCTACGGGTAGTTCGAGCAACTGGCGAGAGATGGACAATTCTCCCAAATCTTCCATTCAGGCGGAGTAAACTTGCAGCCAGACAACTCTGTTTACTGGGGTGGGAATGAAAACATGTCTGGGAGTGGCATCAAGTTACACATACAGCATCAACTCATCTTAACTTTGGGCATGTATGACAGTGACTGAAATACCCCCAAAGTCCAAAACTATAAAGCAAATTAAGCTTTTTGCATATGAATCAGGAGACAAGAGGGAAGTCGTGTTGACTGAGAATTTGCAACAAGGACAGTCAATATGGACACATTACCTGTGTTTTTTGCCTGATTCTGCATGCAAAcgtgttcttttcttttacgTAACCACagcaaaaaatatttgaaaaaacactgggaaaaagaagagaaattcCAAGGTTTTACTTCTAAGTTATCAAGCTCATTACAATTGTTAGTATAATCACTAGATGctgacaattattattttacataattttgTTGAAACAGTTTCAACAAATTCAACAGTCCCAAGTAGTCAAGCTGATTTTTAGAGTCCCAACATGATTcctttttgatacattttgaagagAAAAACACTTTTCCAGGAATACTGCTTTTACTAGTGGTTAGGTTTCTCTTCAGTGCTGCCGAACACCCTGTCCTGCTAAGAGTGTTTACAAAGATAAAACTCACATAGCAGCCAGAAATGCGTGCTGGTGAAAATGACTCCTCCAGACCGCACGTTTCTAAGTAACTGAGGCAGTCACCTCACCCTTTGTTTAGCTttccattttgttgtttttctcagaACCACATTTTAGTGGCTTATGTAAAAAGAAACCTTTCCTTTTGAcctatcataaaaaaaaaagaaaaataatgggTGTGGGGTTTAGACTACATCTTTTAGTCAGGCCGTTGCGTGCATCCACATTTTCCCCATTATTTCATGTTGCAGCTGGCAGTTATTTGTGTGGGTCCCTAACGACTGGCTTTCATTTCTGTTCAGTGGAGGCAGATGGGATCACCTTGAAAATAGCAGGACAttcacctacagacacacacacacacacacacacacacacatagtgtaGGGGGGCGGTGGGTGTTTCACAGTTGGAGGAGTCTACCTACCGACCCGCACACCCATCCCACGGCTTTCACAAAATGTTGGGGAGAAGCTCACACATTCCACACACTCTACGTCAACACATttcctgattttttttctgacatccTGCACCATTGGGGGTGGTCTGTTTTTTTGGCTTCATTTGCACTCCAGACAAAAACAATCTCCTGCACATTAATGCGATGTGCATGTGGACAGTAACGGTTGTCAGACCAACATGAGAACATGTACGTTATGATGTATGAAGACATTTCTATCTGACTGTATGGTATATTTGTACATAAAAGGCACTTAAATATCTGTATATAGGAATAATATATGTAAATCTGTTCAACATGATTTATGTTTGTCTGTAATGGCTtgtgtacataaaaaaaaaatctaaatatactatacatatatgTTGAAATATACATATTTATGCACTGAATACTACACTGGCTTTGTCTCCTGTTTTCACAACCACGGCACGGATGGTTTCACTTGCTTTGTTTGTGCTTCATGCAGTTGCTGCACAGAAATCTCTGGTGTTACATTTGCTAAAAAATTGAGCAATTCTGAACTTATATCTCTTGCCAATCTAAGCAATAATCACCTGCCAAGCTCTGGGATGATGCCGTTATTATGATGTCTAAAATAATGTGAAAcaaaatagttctgttaaaGGGAGGAAAGCTGCCCACCCCTTCATaacttaaaatatatacagacaATGTAATAGCTTGTAAAGCTGTTGAATGGAAATGTATCTGTACCAATAAAATCTAAACAAAGAAAGACAGATATCTCGAAACAAGGGCAAATAAAACCATATCTGCATGGCTCCATTACACTTTAGaaagaaaatactttttatacTGTAATTTTTCAATGACGTCTATTAGACTCCATAAGGAGTACAACATGATTTAATTTGATTATTTAATCTATCTAAATCTTGTCTAATTTACTCATCACATGATTCAGTTTCTTGCTGAAAAATAGTGTTACACCTCATGAAATCTTAATTGTGTAATGTAATAAGGCAGTGGTATTACTTCATCCAGCGACTCTTGTAGTCTTTATTGCATCATTAAATAATTTCAACGTCA

Function

NR:

description
LOW QUALITY PROTEIN: arg8-vasotocin receptor-like

GO: NA

KEGG:

id description
K04226 AVPR1A; arginine vasopressin receptor 1A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809914.1 True 3503 mRNA 0.43 2 23551853 23556076

Neighbor

gene id symbol gene type direction distance location
ppm1h ppm1h coding downstream 14328 23503797 ~ 23537525 (-)
fbln1 fbln1,LOC104955511,LOC103380317 coding downstream 144184 23376581 ~ 23407669 (-)
pparab LOC104921011,LOC103371465 coding downstream 360422 23161150 ~ 23191431 (-)
yars2 yars2,LOC102786810 coding downstream 394885 23150719 ~ 23156968 (-)
cdkn1bb cdkn1b coding downstream 403550 23144257 ~ 23148303 (-)
LOC120563353 NA coding upstream 21502 23577578 ~ 23584567 (-)
LOC120563807 NA coding upstream 91305 23647381 ~ 23650377 (-)
LOC120564359 NA coding upstream 97469 23653545 ~ 23663803 (-)
ptdss2 ptdss2 coding upstream 139957 23696033 ~ 23733655 (-)
LOC120564460 LOC102301235,LOC102778663,LOC102214577,LOC100712095 coding upstream 324215 23880291 ~ 23893596 (-)
G87469 NA non-coding downstream 313321 23231238 ~ 23238532 (-)
LOC120563856 NA non-coding downstream 327212 23198572 ~ 23224641 (-)
G87464 NA non-coding downstream 402509 23149119 ~ 23149344 (-)
G87400 NA non-coding downstream 713987 22761185 ~ 22837866 (-)
LOC120563633 NA non-coding downstream 869577 22577017 ~ 22682276 (-)
G87596 ankrd26 non-coding upstream 73650 23629726 ~ 23630285 (-)
G87614 bmt2 non-coding upstream 124672 23680748 ~ 23737505 (-)
G87695 NA non-coding upstream 481808 24037884 ~ 24039901 (-)
G87693 NA non-coding upstream 486382 24042458 ~ 24043739 (-)
G87733 NA non-coding upstream 802917 24358993 ~ 24359284 (-)
G87538 NA other downstream 53194 23494330 ~ 23498659 (-)
LOC120564579 LOC103366737 other downstream 129396 23411510 ~ 23422457 (-)
parvg parvg other downstream 845557 22689161 ~ 22706296 (-)
LOC120564428 NA other downstream 1184875 22347170 ~ 22366978 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other downstream 1812509 21735006 ~ 21739344 (-)
G87624 LOC103358853,LOC104921025 other upstream 182906 23738982 ~ 23741190 (-)
LOC120563922 NA other upstream 353093 23909169 ~ 23916202 (-)
G87803 NA other upstream 1508676 25064752 ~ 25065488 (-)
G87897 NA other upstream 2040277 25596353 ~ 25596761 (-)
phrf1 NA other upstream 2074700 25630776 ~ 25647000 (-)

Expression


Co-expression Network