si:dkey-234i14.6 (LOC104941367,LOC101483377,LOC102290229,LOC105938209)


Basic Information

Item Value
gene id si:dkey-234i14.6
gene name LOC104941367,LOC101483377,LOC102290229,LOC105938209
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 13671956 ~ 13682237 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809916.1
TTAAGCAGCTATTAGATTTTAGGAAGGGACGATCAAATGCCTACAACTAGTTTTCCATTGACTTTACGAGGTCCTGCTTCTTGCAGAAATATGACGATATAAACATTTACGCGAATAATGCTGAtacaaaaaagctcattttGCGCTAAGCTCTCCCGACACACCGTCcttcaggagagagagagagagagagagagagagagagctgcttGCTGCAACAACTCAACTTGCAGCTGAGGGAGCGGAGAGGACGCATGTGGCAAGTCTCGGCTGGTTGGTTTGGCTGTGTGCACGGATGTAAAGCCGGCTGCTCTCTTTCGGTGAATGCATGGATGATGAGAGGACGTTCAGCTAATTGATAAGGGAGGATACAGCTGCTGGCATACGTTACAATATAATTCCTGCGTGCGATATGGACGGGTTGCAGGCAGAAAATGCTGGAGTTGGCGGCATCGGGGAAGACGCAGAGGAGAGGTATCGCGCTCTAGCCTATGACACTGCTCTGAGCACTTTGGTGGCAGTGGCCGTGTATGTGGTGGTGAAAGTGAGCCTGGACGGCATTAGACAGTGGCGGGCCAGGATCTCGGTGCTCATCGTGGGTTCGGGACCTGTGGGGCTGACGGCCGCGCTGGTCGCTGTCCGCTCCGGTAAGGTGCTGAAACTGACCGTGCTGGATGAGAGGTACCGGACTGCCTTGCTCTGCCGGCCCCAGCAGATTGCCCTGGATCCCCGGAGTGTGAAGTTTCTGCTGGGACTCGGGGTGGACTTTGATAACATGGAGGGCTGTTGGCACAACGAGCATTTCTTCACCAGAATAGGCGTGTTTCAGGAGTACCTGCTGAGCATCCTGGAGCAGAAGAAACAGAAGGTGGACGTCAAGGTGCAGCTGGGAACCAAGTTTACGGAGGAATACCTGCGGCGGATCCCAAGGAATGAGTGGCCACGTGTGATTGTGGTGGCTGATGGGTCATGTGGCGACTCCTGCTCGGTGCTGGGCATCAGCTCTGACTACACTGTGGAGTCCTGCCATGCCTATGGAGCTAATGCAACTATAGAGAGATTAGACCAGAGACAGGTACCCACTCCTGAGATCCGTGCCCACAGCCTCTACTTCGACCTGTCCGCTTACGGAGTGGAGGCCCCCCGAGAGCACCGAAATGCCACGGCCAAACCTGGCTTCCACGTGAAGATCTATGGCACCTTCAGAAATCGCTACATGGCCCTCGCCTGCCCCGCCTCTGACACAAAGATGGTTCGCTTCCTCAGGCACACAGCCAACTCCTCTATCATGAAgaacattttccaccaatcctTCAATGTCTATAAGACGGACATAGAGCCCCGCCTCAACGACGTGACGCTCCACCACATGCAGTGCAGCCGTCGTCTTTTTGAGATTCAGTTATCACACCGACGCATCAGTGCTGCCTACATAGAGGGGGACAATGTGGCGGTCACTGTGGAGGGGGAGGCGGCACGCGTCCTCAACTTCGACACAGgTTGTGGGGTGAATTTAGGTATGCGGGGTCTGGAGTCCATGGGGACGTTCATTTACCGGACAGCCACCGCTGTGGACCAGAATGATATTCTAGAGGCACTGTCGGCTAAGATGCAACACTCAAGACAGGTGGCTGAGACCTTCAAGCTGACAGACCTGGCTCAATCAATGTATGAATGAAACACGATGCCGACCTGGTGAATGCATAATGCCACCGAGTGGAAAGTGGGGGtggattatttgtttttacaataaGAGCTGTGAACAGATGGATAATGGACGTAAACATGTAAGTCTTTGTGACATAGAGTGAGTGGATCTACAGTATTATATGGACGGAGCGAGAATAGCCAAGGCCACATTTTGTacaatagcctacttttgaAGCTGTTCTGATTTTCAGGTTGCAAAGCTTGTCAACAAACTGTGGCAGAAAGAGATATCATCTTTGACTGCTGCAATGAAACAATATGACTACAAAAGCACTGCACCTTGGATTTGGATTCCTCTATAAAGTGTGATAATGTAGAGGAAAGAAATCTAGCCTGAAGAGGTTAGGAGTAGTTGGAATAAATGAAAACTCTGATCCTTATTATTTTCATCACTATTGTCTTCTCctgtttttggggggggaaaaTTGACTGGATTTCCAAAGTCTAGCCAATTGTGCTCTCTGGACATCAATGGTGCTTGGGGAAATGAGCAAAGTGGAGAGAACTTAAGATGTGTATTGTGCCGTAGCAACATCAGCTAGAACTGAATAACGTATAAAACTGTCATTGTCCTTGTAGAATCAGATGAAACCCAAAGTGTAATTATCAAgcatttgtctttgttttgtttttttaattgttgtgGTAATTGTGGTGATCTAATGTATAGATTGGCTTATTTTGTGTGCTGCCTTGTAAATCAAGATTGTTGGTGTATTtctaatcagtccctccaggatttcgtgaCGTCGCGATCGcaacaattcacgcaaattcaaccaatcaccgtgaattcGTTGTGAcccgcaattttgaccaatcacgcTACTTTACCACAAATTTGATCAAAAACCGgagtttcccgcgacttcaaccaatcacagcagtcccacgtgccagactttgcgtcagtatgtgactctgagagccaatgaccaagTGGGAGTGAGACGTAACACACGTACGTTGCCGAATTCATTTCCCTGTTtccgatatgaagacgagaTGTGTGTGattcgaacatctcacatttaccaacaatacgtacagcgaaagacatttcagaccgtcctgccaacctgtatacatattaacatcaatgtacgctgtaacgatttttAGCTGCTGCTGTGTATCAATTCTGtctgctctctgcagcgggcggggctgctgctcagttgcgtgcacacaaacacacggtggatgcaggaaaaaccggagatgagacgtag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106561240 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809916.1 True 2942 mRNA 0.49 5 13671956 13682237

Neighbor

gene id symbol gene type direction distance location
LOC120563596 LOC794378,LOC106676715 coding downstream 151219 13517683 ~ 13520737 (-)
nfat5a nfat5 coding downstream 245295 13409573 ~ 13426661 (-)
LOC120564184 dynlrb2,LOC106573385 coding downstream 283970 13386741 ~ 13387986 (-)
LOC120564570 LOC104956524,LOC103371543 coding downstream 370634 13273770 ~ 13301322 (-)
tmem60 LOC104956518,LOC103371546 coding downstream 425782 13244209 ~ 13246174 (-)
prpf18 prpf18 coding upstream 3961 13686198 ~ 13693332 (-)
cpt1b cpt1b coding upstream 27749 13709986 ~ 13722388 (-)
LOC120563649 LOC103364023,LOC104941359 coding upstream 40546 13722783 ~ 13726359 (-)
chkb chkb,LOC100699097,LOC106532760,LOC102775816 coding upstream 44951 13727188 ~ 13740100 (-)
LOC120563982 pgc coding upstream 76053 13758290 ~ 13761333 (-)
G84592 NA non-coding downstream 27108 13644417 ~ 13644848 (-)
G84585 NA non-coding downstream 227344 13434739 ~ 13444612 (-)
G84536 NA non-coding downstream 346698 13322182 ~ 13325258 (-)
G84528 NA non-coding downstream 399427 13271252 ~ 13272529 (-)
G84533 NA non-coding downstream 435095 13236651 ~ 13236861 (-)
G84597 NA non-coding upstream 1587 13683824 ~ 13685469 (-)
G84719 NA non-coding upstream 390396 14072633 ~ 14072948 (-)
G84751 LOC103368197 non-coding upstream 555345 14237582 ~ 14238451 (-)
G84752 LOC101063650,LOC106561215,LOC104965117 non-coding upstream 558284 14240521 ~ 14241054 (-)
G84760 NA non-coding upstream 580466 14262703 ~ 14263115 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other downstream 53170 13573831 ~ 13618786 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other downstream 286751 13325973 ~ 13385205 (-)
prr5a prr5,LOC103371545 other downstream 415863 13246828 ~ 13256093 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other downstream 440861 13230617 ~ 13231095 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 1527410 12141523 ~ 12144546 (-)
zgc:77752 NA other upstream 348867 14031104 ~ 14037716 (-)
LOC120564470 NA other upstream 540960 14223197 ~ 14236952 (-)
LOC120563775 cacna2d1,LOC104952157 other upstream 819659 14501896 ~ 14558228 (-)
si:ch1073-390k14.1 LOC103375950 other upstream 1279623 14961860 ~ 14967783 (-)
G85014 ppp6r2,LOC103370604 other upstream 1383802 15066039 ~ 15073350 (-)

Expression


Co-expression Network