lmf2a (lmf2,LOC102783784)


Basic Information

Item Value
gene id lmf2a
gene name lmf2,LOC102783784
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 15098626 ~ 15105742 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809927.1
AGGCCGTTTGGGGGAACTTCTCATCAACCACTCATCGCTACGTGACGTGGCCCGTCCCCAGGCTAAGTTAAATCCATCCTGTCCGCTTCCCCGGCCGCTACAGGAGCAGACAGCGGCAACTCGGCAGTGAAAGCACCGACTGTCCCATCCAGCAGCTCGGCCCAGACATGAGGGAAATCATCCTGCCACGGCGCATGTTCCTCTGGAGCATGGCGGTCATCTATCTTGCTGCTTTTGTGTCCCTCTATATGCAGATACCAGGTCTCTATGGTAATGATGGGCTGTTGCCTGCTCGTTGGCAGCTGCGTTACAGCGGTAAGTCACTAGGGGAACAGCTGCTGTCCTCTCCCACCCTGCTGTGGCTGGGACCTCGGCTCGGCTTGGACACGCACACCGCTATGGAGCTGCTGTGTCTCATAGGTGCTGCCCTGAGCCTCGCTGCCACGCTGGTAGAGGCTCTGCGAGACAGCGTGGTGTTTTTCTGCCTGTGGGCCTTGTACCTGTCCATGTACCAGGTGGGCCAGGTTTTTCTCTACTTCCAATGGGACAACTTGCTTCTGGAGACAGGGTTCCTCTGTATCCTTGTTGCCCCACTGACCTTAATCCGAGGGTCGCGAGGGGTAAGAGCGCATGATCGCGTGACCTTCTGGCTGATCCGCTGGTTGCTCTTTAGGCTCATGTTTGCCTCTGGTGTGGTGAAACTCACATCTCGTTGTCCCACATGGTGGGGCCTTACAGCTCTGACGTATCACTATGAGACTCAGTGTATCCCCACCCCGCTGGCCTGGTTTGCCCTACAGTTGCCGGTTTGGTGGCATAAGTTGAGTGTGGTGGGGACCTTCGTAATAGAGATCGCTGCACCCCTGCTTTTCTTTAGCCCACTGCGCAGACTCCGGCTTGGGGCTTTTTACTTGCAGGTGTTGCTTCAAGTGCTCATCATTTTGACTGGCAACTACAATTTCTTCAACCTGCTGACTTTGGCCCTGTGTCTGTCGCTTCTGGACGATCAGCATGTACACTTCTGGCTACGCAAGGCCGACAAGATCAGCAACAATGACTCCAAGTTGCGGTCGTGGCTGTGTTACCTGCTGGAGCTGGCAGTCTGGTCTCTCATGATCTTTGGATCAGTTGTATGCTTTGACCTGAAGCTGGATACAACGAAGAACAGCATCTCCTCcaggacagCATTCACATTCCACCAGTTTAACCAGTTTCTGAAGACAGTCACTATCCCCTCGATCTGGATTGGTGTCCTCTCTCTCACCTGGGAGATGGTCACAGCCATGTTCAGgtgtgcatgtgtctccGGTTTCCTGAAGAGGTTTTGGGGAACTCTCCAGTGGACTGTGTTTGCTGCTGCCACTGTCGCTATGTTCACTATAAGTCTGGTGCCATTCAGCTATATAGAGTTTGACTCTCATGCCAGGTTGTGGCCGGGAGTGCGTCAGGCCTATGATATGGTGGATCGCTACCAACTGGTCAACTCATACGGCCTGTTCAGAAGGATGACCGGGGTCAGTGGGCGGCCAGAGGTTGTCATCGAGGGAAGCAACGATGGAGTCTCGTGGACGgaGATTGAGTTCATGTATAAGCCAGGCAACCTAAGTGCAGCACCTGCTGTGCTGACACCCCACCAGCCCAGGTTGGACTGGCAAATGTGGTTTGCTGCCCTCGGGGATCAAACGCAGGCTCCATGGTTCACCAGCCTCATATACAGCCTGCTGCAGGGCAAAAGAGATGTGATAGAGTTGATCCAGACCGATGTATCACAGTATCCGTTCTACCAGCAGCCTCCCACCTACCTCCGTGCCCACCGCTACAGATACTGGTTTACTGAACCGAAGGCTGACGGTTCCTACCCAAAGCGTTGGTGGAGGAGGGTCTATGATGAGGAATTTTATCCCACAGTGCACCTGGGCAGCACTTTCCTGGAGAGCATGCTCAATCAGCATGGACTCAAGGACAAATCGCCTCCACGTCGTATGCCCAACACCACTGTTGCCCAGACGGTGAGGTGGGTGCGCTCTCAGGTCAGAGGTGTTCCTACCCACATACTTATCTGGACTCTCATTGCCTCCAGCGTCACCCTCTGTCTGCTCCAGGGATTGCAAAACAGGAATAAACACACCGAAAGGACCCCACTCACTTATATGGCCGCTGGGAACGATCACAGAGATAATGTACCTGACGACTCTTCAGACCATTGTGGGAAGTCGGATGAACAACAGacagcggaggaggaggagaagaaagaagatGGACAGGACAGTGAAGATGAGGTGGAGGAGggcggaggagaggagaaagaagatGCCTGTGACGACGAAGAGGACTAGgtaaaagaggaggagggagacaggAATGATAAGTTTTGAAAAAGATGAAGGTAATCCCGTTATAGACTGTTATCACCACCTGCCTTTTATATAATGTCACCAAAatgaccaaagaagttgttCTGTGCATAGTTGTAATTTTGGATCAGCcaattataactttatttgcCTTCTCCAAGCCACACCTCACTGCagtatatatttcataaatcagTTGTCTACATCAGAAACCAATCGCTTAATTCACCACATCTTAtcagatgtttaaaaaaaa

Function

symbol description
lmf2 Predicted to be involved in protein maturation. Located in membrane.

NR:

description
lipase maturation factor 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809927.1 True 2610 mRNA 0.52 14 15098626 15105742

Neighbor

gene id symbol gene type direction distance location
dnaja2b dnaja2,LOC103370603,LOC100703595,LOC101465466 coding downstream 41496 15051850 ~ 15057130 (-)
LOC120563916 NA coding downstream 85810 15004301 ~ 15012816 (-)
LOC120563915 LOC103375945,LOC104957331,LOC101467291,LOC102310371 coding downstream 108112 14973281 ~ 14990514 (-)
elapor2a kiaa1324l,LOC104944050 coding downstream 179350 14903173 ~ 14919276 (-)
sema3d sema3d coding downstream 303496 14757979 ~ 14795130 (-)
c2cd5 NA coding upstream 329 15106071 ~ 15131264 (-)
b4galnt3b LOC103133797,LOC106915345 coding upstream 33699 15139441 ~ 15158824 (-)
fkbp4 fkbp4 coding upstream 57811 15163553 ~ 15172203 (-)
wash1 wash1,LOC102303465,LOC101485180 coding upstream 76867 15182609 ~ 15189986 (-)
ptprq ptprq,LOC107705767 coding upstream 114008 15219750 ~ 15261813 (-)
G85011 ppp6r2 non-coding downstream 35489 15062611 ~ 15063137 (-)
G85007 NA non-coding downstream 40697 15057725 ~ 15057929 (-)
G84948 NA non-coding downstream 143219 14954128 ~ 14955407 (-)
G84971 NA non-coding downstream 246603 14851720 ~ 14852023 (-)
LOC120564774 NA non-coding downstream 290558 14807411 ~ 14808068 (-)
G85027 NA non-coding upstream 72598 15178340 ~ 15179173 (-)
G85084 NA non-coding upstream 256095 15361837 ~ 15363425 (-)
LOC120563611 NA non-coding upstream 347467 15453209 ~ 15455514 (-)
G85121 LOC103364747,LOC103358513 non-coding upstream 349913 15455655 ~ 15458913 (-)
LOC120563610 NA non-coding upstream 350098 15455840 ~ 15456554 (-)
G85014 ppp6r2,LOC103370604 other downstream 25276 15066039 ~ 15073350 (-)
si:ch1073-390k14.1 LOC103375950 other downstream 130843 14961860 ~ 14967783 (-)
LOC120563775 cacna2d1,LOC104952157 other downstream 540398 14501896 ~ 14558228 (-)
LOC120564470 NA other downstream 861674 14223197 ~ 14236952 (-)
zgc:77752 NA other downstream 1060910 14031104 ~ 14037716 (-)
ttc23 LOC104957250 other upstream 367192 15472934 ~ 15484145 (-)
G85133 mef2a,mef2aa,LOC107553916 other upstream 409036 15514778 ~ 15544082 (-)
chd2 chd2 other upstream 1050242 16155984 ~ 16187336 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other upstream 1083111 16188853 ~ 16209186 (-)
G85321 NA other upstream 1333632 16439374 ~ 16440965 (-)

Expression


Co-expression Network