LOC120564741 (LOC104962548,LOC102797891,LOC101479938,LOC102194218,LOC102291278)


Basic Information

Item Value
gene id LOC120564741
gene name LOC104962548,LOC102797891,LOC101479938,LOC102194218,LOC102291278
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 21726086 ~ 21734094 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809949.1
CTGTAAACTTTGGTTGGAGAAATGGTTGATCAAACGAAACACGTGTAACGTTAACCGATGTGGGTGGGGCGGAAAACTGTAAACACCAACTGACTGTGCTATTCGACTCTAGCTTCTGACTTGATTTATGAGATAGATTGTTACTAGCTGGTAGAACTTCATCAGATGGTAGCTGAGATCAACAAAAATGTTCCGTTAGCGCATAAAACTTGAAACGCAAAATGCGATGCTATCTTCAAGCATTTCTCCTGTGCATGGTCTTCACCTTCTTTTCACTGTTGTATGTGTTCAATCAACTCGCCTCCACCTTGGAGGACAGAGACGACTGGAACCTGAAAGAACAGGGGATACCCGACAGGCGCAGTCATGACTATGGGCATCTTCTCAGGAAAAGGCCAGGACTGACAGGCCTTCGAGACCGCGAAGAAGAGCTTGACAGGTGTAAATCACTGTCAGTTTCTTACTGGAATCCATATTGGAGACTACCTGCTGATGTTTGTGGAGTGAACTGCTTATTGGATTCATCTCTTAGAGAGAGGTCAGGCTCTGCAGTCAAGGAACATAGTGATGAAAGAAGTCACCTGGCTGTGGTGGCCTGTGGCCCCAGGCTAGAGGAGACTCTTACCATGTTGAAGTCTGCTGTTCTCCTCAGCAAAAAGCCTCTGCACTTTTACGTCTTTGCTGAGGATGATCTACATGACCGCTTCAGAAATGCTCTGGACTCCTGGCCCAGGACTGTTCAGACCAAGTTTAACTTCACCATCTACCCCATCACTTTCCCCAAGGAGAATGTGAAGGAGTGGAAGAAGCTCTTCAAACCATGTGCCTCTCAGAGGCTCTTCCTGCCActgatcctaAAGGAGGTGGATTCTTTGCTCTATGTGGACACAGATATCATTTTTTTGCAGCCAGTAGAGGACATCTGGGCCCTTTTTTCTCAGTTCAAATCGAGCCACTTAGCTGCCATGGCTCCAGAGCACGAGGAGCCACGCATTGGCTGGTACAACCGTTTTGCCCGCCATCCTTACTATGGCAAGACAGGAATCAACTCAGGGGTCATGCTCATGAACATGACGCGCCTCAGGGAGAAATCCTTTAAGAATGACATGACAATAGTTGCACTGAAGTGGGAGGAAATTCTGATGCCCCTTCTCCAGAAGTATAAACTCAATATCACCTGGGGTGACCAGGACCTTCTTAATATCATATTTCACCATAACCCAGAAAGCCTATATGTGTTCCCCTGCCAGTGGAACTACCGTCCAGACCATTGTATCTATGGCAGCAACTGTCAACAGGCTGATCAGGAAGGTGTCTTCATTCTCCACGGTAACAGGGGAGTTTACCATGATGACAAGCAGCCTGCGTTTCGAGCCGTCTACGAGGCCATCCAAAAGTACACATTTGGTGAGGACATGGAGACCTCACTGCTTCAGCCGCTGGAAGCGTCGCTACAGGCAACCACAAATACCTACTGTGGAAGAGCCAGTCACCTGTTCACGAAGAAGTTAAAACAGAGCATCATGTCTGTTCAACAAGATGCCGCACAGAGAAGATGAGCAGGACAACACTCTTATATCACTGATATCATGATTAGTGTCTTAATTTCTCTCTGGAAGTAAATACTTAAATGTAAGACACTCCTGTGAAGACAGTGAGCTggatgacaaacacacacaggtcagcTCTGAACGTTTATCGGTTTACAAACTGCATATCAAGACTGGAAATGGGGAAGGGTAATCTGTTGAACAGGTTATATTTTCTATTCTTAAGTGAAGCCAATGTTGGTACATATCTGTCCAATGAACACACAATCAGGTCACATATGCTATCACGCCATATGGGGGAAAATGCACCGACACTTTTTAGAAAGAACTTACAATCACTTTATACAATTGTCTAAGGACTTTGGGGGAAGATGAATGCAGCAGGGTACTTACATATGTACTCTTATCAAGATTATTTTATTAGAGTTTATAATTTTGCATACAGGTTTTGTACTAGAGTTTTTGTCACTGCAGTATATCATGGAAAAGGGTTatcttcatgttttttttaagtaagtgtcacatcttttttaaacaaaacaaatgctCATTAAGAATACTtcaaacatatacagtacaggccaaaagtttgga
>XM_039809950.1
TACACACTGTAAACTTTGGTTGGAGAAATGGTTGATCAAACGAAACACGTGTAACGTTAACCGATGTGGGTGGGGCGGAAAACTGTAAACACCAACTGACTGTGCTATTCGACTCTAGCTTCTGACTTGATTTATGAGATAGATTGTTACTAGCTGGTAGAACTTCATCAGATGGTAGCTGAGATCAACAAAAATGTTCCGTTAGCGCATAAAACTTGAAACGCAAAATGCGATGCTATCTTCAAGCATTTCTCCTGTGCATGGTCTTCACCTTCTTTTCACTGTTGTATGTGTTCAATCAACTCGCCTCCACCTTGGAGGACAGAGACGACTGGAACCTGAAAGAACAGGGGATACCCGACAGGCGCAGTCATGACTATGGGCATCTTCTCAGGAAAAGGCCAGGACTGACAGGCCTTCGAGACCGCGAAGAAGAGCTTGACAGGTGTAAATCACTGTCAGTTTCTTACTGGAATCCATATTGGAGACTACCTGCTGATGTTTGTGGAGTGAACTGCTTATTGGATTCATCTCTTAGAGAGAGGTCAGGCTCTGCAGTCAAGGAACATAGTGATGAAAGAAGTCACCTGGCTGTGGTGGCCTGTGGCCCCAGGCTAGAGGAGACTCTTACCATGTTGAAGTCTGCTGTTCTCCTCAGCAAAAAGCCTCTGCACTTTTACGTCTTTGCTGAGGATGATCTACATGACCGCTTCAGAAATGCTCTGGACTCCTGGCCCAGGACTGTTCAGACCAAGTTTAACTTCACCATCTACCCCATCACTTTCCCCAAGGAGAATGTGAAGGAGTGGAAGAAGCTCTTCAAACCATGTGCCTCTCAGAGGCTCTTCCTGCCACCAGTAGAGGACATCTGGGCCCTTTTTTCTCAGTTCAAATCGAGCCACTTAGCTGCCATGGCTCCAGAGCACGAGGAGCCACGCATTGGCTGGTACAACCGTTTTGCCCGCCATCCTTACTATGGCAAGACAGGAATCAACTCAGGGGTCATGCTCATGAACATGACGCGCCTCAGGGAGAAATCCTTTAAGAATGACATGACAATAGTTGCACTGAAGTGGGAGGAAATTCTGATGCCCCTTCTCCAGAAGTATAAACTCAATATCACCTGGGGTGACCAGGACCTTCTTAATATCATATTTCACCATAACCCAGAAAGCCTATATGTGTTCCCCTGCCAGTGGAACTACCGTCCAGACCATTGTATCTATGGCAGCAACTGTCAACAGGCTGATCAGGAAGGTGTCTTCATTCTCCACGGTAACAGGGGAGTTTACCATGATGACAAGCAGCCTGCGTTTCGAGCCGTCTACGAGGCCATCCAAAAGTACACATTTGGTGAGGACATGGAGACCTCACTGCTTCAGCCGCTGGAAGCGTCGCTACAGGCAACCACAAATACCTACTGTGGAAGAGCCAGTCACCTGTTCACGAAGAAGTTAAAACAGAGCATCATGTCTGTTCAACAAGATGCCGCACAGAGAAGATGAGCAGGACAACACTCTTATATCACTGATATCATGATTAGTGTCTTAATTTCTCTCTGGAAGTAAATACTTAAATGTAAGACACTCCTGTGAAGACAGTGAGCTggatgacaaacacacacaggtcagcTCTGAACGTTTATCGGTTTACAAACTGCATATCAAGACTGGAAATGGGGAAGGGTAATCTGTTGAACAGGTTATATTTTCTATTCTTAAGTGAAGCCAATGTTGGTACATATCTGTCCAATGAACACACAATCAGGTCACATATGCTATCACGCCATATGGGGGAAAATGCACCGACACTTTTTAGAAAGAACTTACAATCACTTTATACAATTGTCTAAGGACTTTGGGGGAAGATGAATGCAGCAGGGTACTTACATATGTACTCTTATCAAGATTATTTTATTAGAGTTTATAATTTTGCATACAGGTTTTGTACTAGAGTTTTTGTCACTGCAGTATATCATGGAAAAGGGTTatcttcatgttttttttaagtaagtgtcacatcttttttaaacaaaacaaatgctCATTAAGAATACTtcaaacatatacagtacaggccaaaagtttgga
>XM_039809952.1
TTAACCGATGTGGGTGGGGCGGAAAACTGTAAACACCAACTGACTGTGCTATTCGACTCTAGCTTCTGACTTGATTTATGAGATAGATTGTTACTAGCTGGTAGAACTTCATCAGATGGTAGCTGAGATCAACAAAAATGTTCCGTTAGCGCATAAAACTTGAAACGCAAAATGCGATGCTATCTTCAAGCATTTCTCCTGTGCATGGTCTTCACCTTCTTTTCACTGTTGTATGTGTTCAATCAACTCGCCTCCACCTTGGAGGACAGAGACGACTGGAACCTGAAAGAACAGGGGATACCCGACAGGCGCAGTCATGACTATGGGCATCTTCTCAGGAAAAGGCCAGGACTGACAGGCCTTCGAGACCGCGAAGAAGAGCTTGACAGAGAGAGGTCAGGCTCTGCAGTCAAGGAACATAGTGATGAAAGAAGTCACCTGGCTGTGGTGGCCTGTGGCCCCAGGCTAGAGGAGACTCTTACCATGTTGAAGTCTGCTGTTCTCCTCAGCAAAAAGCCTCTGCACTTTTACGTCTTTGCTGAGGATGATCTACATGACCGCTTCAGAAATGCTCTGGACTCCTGGCCCAGGACTGTTCAGACCAAGTTTAACTTCACCATCTACCCCATCACTTTCCCCAAGGAGAATGTGAAGGAGTGGAAGAAGCTCTTCAAACCATGTGCCTCTCAGAGGCTCTTCCTGCCActgatcctaAAGGAGGTGGATTCTTTGCTCTATGTGGACACAGATATCATTTTTTTGCAGCCAGTAGAGGACATCTGGGCCCTTTTTTCTCAGTTCAAATCGAGCCACTTAGCTGCCATGGCTCCAGAGCACGAGGAGCCACGCATTGGCTGGTACAACCGTTTTGCCCGCCATCCTTACTATGGCAAGACAGGAATCAACTCAGGGGTCATGCTCATGAACATGACGCGCCTCAGGGAGAAATCCTTTAAGAATGACATGACAATAGTTGCACTGAAGTGGGAGGAAATTCTGATGCCCCTTCTCCAGAAGTATAAACTCAATATCACCTGGGGTGACCAGGACCTTCTTAATATCATATTTCACCATAACCCAGAAAGCCTATATGTGTTCCCCTGCCAGTGGAACTACCGTCCAGACCATTGTATCTATGGCAGCAACTGTCAACAGGCTGATCAGGAAGGTGTCTTCATTCTCCACGGTAACAGGGGAGTTTACCATGATGACAAGCAGCCTGCGTTTCGAGCCGTCTACGAGGCCATCCAAAAGTACACATTTGGTGAGGACATGGAGACCTCACTGCTTCAGCCGCTGGAAGCGTCGCTACAGGCAACCACAAATACCTACTGTGGAAGAGCCAGTCACCTGTTCACGAAGAAGTTAAAACAGAGCATCATGTCTGTTCAACAAGATGCCGCACAGAGAAGATGAGCAGGACAACACTCTTATATCACTGATATCATGATTAGTGTCTTAATTTCTCTCTGGAAGTAAATACTTAAATGTAAGACACTCCTGTGAAGACAGTGAGCTggatgacaaacacacacaggtcagcTCTGAACGTTTATCGGTTTACAAACTGCATATCAAGACTGGAAATGGGGAAGGGTAATCTGTTGAACAGGTTATATTTTCTATTCTTAAGTGAAGCCAATGTTGGTACATATCTGTCCAATGAACACACAATCAGGTCACATATGCTATCACGCCATATGGGGGAAAATGCACCGACACTTTTTAGAAAGAACTTACAATCACTTTATACAATTGTCTAAGGACTTTGGGGGAAGATGAATGCAGCAGGGTACTTACATATGTACTCTTATCAAGATTATTTTATTAGAGTTTATAATTTTGCATACAGGTTTTGTACTAGAGTTTTTGTCACTGCAGTATATCATGGAAAAGGGTTatcttcatgttttttttaagtaagtgtcacatcttttttaaacaaaacaaatgctCATTAAGAATACTtcaaacatatacagtacaggccaaaagtttgga

Function

NR:

description
PREDICTED: glucoside xylosyltransferase 1-like isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG:

id description
K13676 GXYLT; UDP-D-xylose:beta-D-glucoside alpha-1,3-D-xylosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809949.1 True 2144 mRNA 0.44 8 21726086 21734088
XM_039809950.1 False 2090 mRNA 0.44 8 21726086 21734094
XM_039809952.1 False 2001 mRNA 0.45 7 21726086 21734038

Neighbor

gene id symbol gene type direction distance location
dnm1l dnm1l coding downstream 357110 21355580 ~ 21368976 (-)
LOC120563940 NA coding downstream 428487 21284373 ~ 21297599 (-)
zgc:136858 LOC104946800 coding downstream 441346 21277459 ~ 21284740 (-)
cnot4a cnot4,LOC102778264 coding downstream 449188 21263991 ~ 21276898 (-)
tmpob LOC103366874,LOC102305331 coding downstream 536479 21185466 ~ 21189607 (-)
prickle1a prickle1,LOC104925408,LOC104962552 coding upstream 31588 21765682 ~ 21793881 (-)
LOC120563465 adamts20 coding upstream 140879 21874973 ~ 21961067 (-)
twf1a twf1,LOC102795415 coding upstream 279817 22013911 ~ 22029073 (-)
nell2a nell2 coding upstream 357439 22091533 ~ 22211840 (-)
LOC120564446 prl coding upstream 496837 22230931 ~ 22233599 (-)
G87148 NA non-coding downstream 428 21724923 ~ 21725658 (-)
G87123 cntn1 non-coding downstream 176227 21546658 ~ 21549859 (-)
G87120 NA non-coding downstream 213558 21486532 ~ 21512528 (-)
G87107 nrcam,LOC101067328 non-coding downstream 259840 21462705 ~ 21466246 (-)
G87030 LOC103366871,LOC104946806,LOC106525492,LOC108230167 non-coding downstream 474327 21245010 ~ 21251759 (-)
G87232 NA non-coding upstream 271405 22005499 ~ 22008395 (-)
G87249 NA non-coding upstream 336864 22070958 ~ 22082538 (-)
G87254 NA non-coding upstream 371786 22105880 ~ 22106255 (-)
G87320 nuak1 non-coding upstream 553850 22287944 ~ 22355196 (-)
G87329 appl2 non-coding upstream 653901 22387995 ~ 22390216 (-)
G87140 NA other downstream 12532 21713042 ~ 21713554 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other downstream 353577 21369531 ~ 21372509 (-)
LOC120563850 NA other downstream 838460 20877668 ~ 20887626 (-)
LOC120564033 LOC103358331,LOC102195670 other downstream 896851 20806882 ~ 20829235 (-)
G86638 NA other downstream 1466827 20252639 ~ 20259259 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other upstream 912 21735006 ~ 21739344 (-)
LOC120564428 NA other upstream 613076 22347170 ~ 22366978 (-)
parvg parvg other upstream 955067 22689161 ~ 22706296 (-)
LOC120564579 LOC103366737 other upstream 1677416 23411510 ~ 23422457 (-)
G87538 NA other upstream 1760236 23494330 ~ 23498659 (-)

Expression


Co-expression Network