LOC120563413


Basic Information

Item Value
gene id LOC120563413
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 24676596 ~ 24681736 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639948.1
GGTATCAATAATATGTGCTTCTTAATTGGCTTTACAAAGTAACGGTTAATTGCATGGTGAAaaaagctatttatttattgttttgggTGAATATAACTTTGTTTGAAGTTATCTTAACTTGCTTAGAGAGACTATTTGGAACTCATCCAATCAGCAAGCAGGGCTGTGAGTGAGCATGCGCAGTAGAAGCCACCACCGTTCAGTCTCCTGCTCAGGATTGTTAGCGGTGCCAATCGGACTGAGCCAACACATTTTCTGGAATTTGCCGACAAATTTGCTAGAGATTTCATCGCTTGTGGAACAATAAGAAGTGCTTGTGGCAACTGCCTTGAGGGCTCTTCACAGCTGCTTTGTCAGTGGGCCTCAGTACACTGGAGATAAAGCTGACCAACCACAGATCATTCCAAAGACCTTCATCGCTAAGGGAACCATTGTGGGCAACGGACACGAAAACTGGGCTCTCCTGAGGCTGCTTCCATTGATGGACCATGGGAAGCTATAAACTAAGAATCATCATAAATGAAGGGGACATACGGAAAGTGTCACTGGACAGAAAACCAGAAACGGTTGAAGAGCTGaagataaaagtcaaagaaaaatGCAACCTGCAGGATGACTTCAATCTTATGTATGAAGACCCTGACTTTGGTTATTCCCTCTGCAACCTAGATGACATAGGAGACTTGCCAGCTACAAAAGCAACTGTGAAGGTCATTTCATTGGTGACACTGACACTGGTGCCTGCTTCCACCACCAGCATTTCTGATGCCTCAAATGTCTCAGATGATACAGAGATTCTGTCGACATACagctcatcatcatcaacaagaCAAGAGCAATGGCCAGAGTTTTTTGAGATTCCAAACTTCTCGGTTGATGTAGAATTCAGACTGAGACAGGCTAATCTTCAGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639948.1 True 913 lncRNA 0.43 4 24676596 24681736

Neighbor

gene id symbol gene type direction distance location
LOC120563810 NA coding downstream 288347 24383761 ~ 24388249 (-)
rag2 rag2,LOC102798233 coding downstream 456253 24161577 ~ 24220343 (-)
furinb furin,LOC103353086 coding downstream 548861 24044129 ~ 24127735 (-)
unc45a unc45a coding downstream 660456 24008436 ~ 24016140 (-)
LOC120564204 rccd1 coding downstream 668241 24005568 ~ 24008355 (-)
LOC120564736 lrrc4c,LOC104932125,LOC100701892 coding upstream 83680 24765416 ~ 24894803 (-)
slc1a2b slc1a2 coding upstream 580505 25262241 ~ 25293957 (-)
pamr1 LOC103357277 coding upstream 621100 25302836 ~ 25387312 (-)
ascl1b LOC103357271,LOC100706722,LOC104920455,LOC101171241 coding upstream 934625 25616361 ~ 25617983 (-)
rassf7a rassf7 coding upstream 970016 25651752 ~ 25688678 (-)
G87767 NA non-coding downstream 35871 24639857 ~ 24640725 (-)
G87765 NA non-coding downstream 36843 24639005 ~ 24639753 (-)
G87762 NA non-coding downstream 64824 24611425 ~ 24611772 (-)
G87760 NA non-coding downstream 66912 24609434 ~ 24609684 (-)
LOC120564545 NA non-coding downstream 70040 24605897 ~ 24606556 (-)
G87790 NA non-coding upstream 223757 24905493 ~ 24905774 (-)
LOC120563511 NA non-coding upstream 380589 25062325 ~ 25063967 (-)
LOC120564386 NA non-coding upstream 392346 25074082 ~ 25075467 (-)
LOC120564398 NA non-coding upstream 430332 25112068 ~ 25114245 (-)
G87815 NA non-coding upstream 486340 25168076 ~ 25168327 (-)
LOC120563922 NA other downstream 760394 23909169 ~ 23916202 (-)
G87624 LOC103358853,LOC104921025 other downstream 935406 23738982 ~ 23741190 (-)
G87538 NA other downstream 1177937 23494330 ~ 23498659 (-)
LOC120564579 LOC103366737 other downstream 1254139 23411510 ~ 23422457 (-)
parvg parvg other downstream 1970300 22689161 ~ 22706296 (-)
G87803 NA other upstream 383016 25064752 ~ 25065488 (-)
G87897 NA other upstream 914617 25596353 ~ 25596761 (-)
phrf1 NA other upstream 949040 25630776 ~ 25647000 (-)
ptprjb.1 NA other upstream 1971900 26653636 ~ 26692244 (-)
G88249 mthfs other upstream 2331501 27013237 ~ 27014411 (-)

Expression


Co-expression Network