LOC120563423



Basic Information


Item Value
gene id LOC120563423
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 11862361 ~ 11862788 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005639951.1
GCTTTTGCTATCTGCTGCCTGACCACGCCCACCTCACCTGTTGCCTATAAATTGATTGTGAAGCCTTTGGCTCATTCTTTGCTCACTCTGCCGGCACTCCAATGCAACCTGTCACACAGTAACTGCAATGAATCCACGTCACTCTGAATGATAAATAAAATACCACTGGTGCTGCATTGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005639951.1 True 181 lncRNA 0.46 2 11862361 11862788

Neighbor


gene id symbol gene type direction distance location
cspg4 cspg4 coding downstream 519992 11265168 ~ 11342369 (-)
snupn snupn coding downstream 646868 11205454 ~ 11215493 (-)
sin3aa sin3a coding downstream 692438 11146670 ~ 11169923 (-)
wdr61 wdr61 coding downstream 752053 11101049 ~ 11110308 (-)
ireb2 ireb2 coding downstream 781056 11062695 ~ 11081305 (-)
LOC120564089 NA coding upstream 389796 12252584 ~ 12258264 (-)
kras kras,LOC105900436,LOC103038241,LOC107595236 coding upstream 690695 12553483 ~ 12563371 (-)
bhlhe41 bhlhe41,LOC102793158 coding upstream 722523 12585311 ~ 12587491 (-)
itpr2 itpr2 coding upstream 737593 12600381 ~ 12660168 (-)
eea1 eea1 coding upstream 826905 12689693 ~ 12712352 (-)
G84053 NA non-coding downstream 339361 11522709 ~ 11523000 (-)
G84051 NA non-coding downstream 467478 11394548 ~ 11394883 (-)
G84050 NA non-coding downstream 491712 11370399 ~ 11370649 (-)
G83974 NA non-coding downstream 801057 11061067 ~ 11061304 (-)
G83942 NA non-coding downstream 849959 11011298 ~ 11012402 (-)
G84082 NA non-coding upstream 24114 11886902 ~ 11887621 (-)
G84086 NA non-coding upstream 42621 11905409 ~ 11906164 (-)
G84094 hmg20a,LOC107103253 non-coding upstream 100938 11963726 ~ 11966831 (-)
G84098 NA non-coding upstream 195675 12058463 ~ 12058678 (-)
G84100 peak1 non-coding upstream 232785 12095573 ~ 12096034 (-)
ptpn9a ptpn9 other downstream 601400 11173553 ~ 11260961 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other downstream 949144 10823286 ~ 10913217 (-)
LOC120564603 NA other downstream 1147516 10706219 ~ 10714845 (-)
scamp2 LOC103379909,LOC103364404,LOC104932119 other downstream 1199683 10643916 ~ 10662678 (-)
G83826 mfge8,LOC104961859 other downstream 1430217 10389244 ~ 10432144 (-)
G84083 NA other upstream 25239 11888027 ~ 11888398 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other upstream 278735 12141523 ~ 12144546 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other upstream 1367829 13230617 ~ 13231095 (-)
prr5a prr5,LOC103371545 other upstream 1384040 13246828 ~ 13256093 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other upstream 1463185 13325973 ~ 13385205 (-)

Expression



Co-expression Network