LOC120563610


Basic Information

Item Value
gene id LOC120563610
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 15455840 ~ 15456554 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639984.1
CTTTGATGCTGCTGATGATCTCGAGGAAGGACGGACGCATCTTGGGATTATACTGCCAGCACATCCTCATCAGCTCAAACCTGCAAGTGACGCGAGGTAAAAAGGATACATTTGGAAGACACCAAGGtaatttgactttgacttgctGAAGCCTCATAAGTTTTGACAAAAAGAGAACTATGGATTTTGTGTAATTGTGCCACTTCAGAGCCAGGAGAACATGAGGAATGATTACAGCAGCGGACAACTCTTTCAATGTACACACGGGCATGTGAGTATTGTGTACTTGAAAAGAtgtgaacctatcctttaaAACTTTAGAGTGGGAAGACTTTGCGTTTCTCACCAGCAGGTGGCAGGAGACACCAAAGTTAAAGCCAATGTTAATACTCGCTGGCACGAAGTTTCACTATACTgatcttggaaaaaaaaaaactatgtatacagtacattaataTAGTACTGTAAACTATCCCAATATACTGTACTAAGATGCTCTGATtactgtttttctgttgtcttTTTGGAAATTCATTCTGTGCCTTTCATAACATTAAAATGGACACAAAATAAAAGTGTTACATTCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639984.1 True 589 lncRNA 0.39 2 15455840 15456554

Neighbor

gene id symbol gene type direction distance location
cd9a NA coding downstream 137995 15310877 ~ 15317845 (-)
syt1b syt1,LOC100710649,LOC102779835,LOC103358504 coding downstream 151560 15298687 ~ 15304280 (-)
otogl otogl,LOC102779350 coding downstream 163878 15262486 ~ 15291962 (-)
ptprq ptprq,LOC107705767 coding downstream 194027 15219750 ~ 15261813 (-)
pgpep1l LOC103364746 coding upstream 253 15456807 ~ 15463714 (-)
nr2f2 nr2f2,LOC107388818,LOC100705923,LOC108230091,LOC102227842,LOC104957255,LOC106930729,LOC105023478,LOC106573769 coding upstream 345870 15802424 ~ 15811999 (-)
slco3a1 slco3a1 coding upstream 757221 16213775 ~ 16254088 (-)
LOC120563512 LOC104964038,LOC103375536,LOC102794895 coding upstream 924389 16380943 ~ 16409443 (-)
zgc:162879 LOC104964034,LOC103368560,LOC100692867 coding upstream 995479 16452033 ~ 16461232 (-)
LOC120563611 NA non-coding downstream 326 15453209 ~ 15455514 (-)
G85084 NA non-coding downstream 92415 15361837 ~ 15363425 (-)
G85027 NA non-coding downstream 276667 15178340 ~ 15179173 (-)
G85011 ppp6r2 non-coding downstream 392703 15062611 ~ 15063137 (-)
G85007 NA non-coding downstream 397911 15057725 ~ 15057929 (-)
G85125 NA non-coding upstream 10028 15466582 ~ 15472857 (-)
LOC120563424 NA non-coding upstream 402287 15858841 ~ 16048241 (-)
G85250 NA non-coding upstream 801421 16257975 ~ 16258235 (-)
G85253 LOC104921699,LOC103367513,LOC104941665,LOC101473242 non-coding upstream 819097 16275651 ~ 16277412 (-)
G85312 NA non-coding upstream 914447 16371001 ~ 16372919 (-)
G85014 ppp6r2,LOC103370604 other downstream 382490 15066039 ~ 15073350 (-)
si:ch1073-390k14.1 LOC103375950 other downstream 488057 14961860 ~ 14967783 (-)
LOC120563775 cacna2d1,LOC104952157 other downstream 897612 14501896 ~ 14558228 (-)
LOC120564470 NA other downstream 1218888 14223197 ~ 14236952 (-)
zgc:77752 NA other downstream 1418124 14031104 ~ 14037716 (-)
ttc23 LOC104957250 other upstream 16380 15472934 ~ 15484145 (-)
G85133 mef2a,mef2aa,LOC107553916 other upstream 58224 15514778 ~ 15544082 (-)
chd2 chd2 other upstream 699430 16155984 ~ 16187336 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other upstream 732299 16188853 ~ 16209186 (-)
G85321 NA other upstream 982820 16439374 ~ 16440965 (-)

Expression


Co-expression Network