LOC120564464


Basic Information

Item Value
gene id LOC120564464
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 206557 ~ 213727 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640107.1
AGCAGAGTAGAGCAGCAGTCCGactccgcagcagcagcagcgttctTTCAACACTGATTTGTCCAGATCACAGTTGTTTCAAACACTGTTGGAAAGTGTGCTTCTTTGCCACGTTGGCATGGTGGCAGATATAGGGGGCACAAATGTAGATGATGCAACGAGGCGAATGATGAAATACATTCTGTCAAACGAGCTGGCATTGGACTATAACATGTTTGGCCGTCACGGGAAAAAGAAGTTTAAGGACTTGTGTCTTTTCAACGTTGTGTATGAGGCTCTTAAGAAGAATTCGTTGGTGAACCAGCAGGAGGCAGAGAGGGCACTGTCGAAATGGCTCATTGGGgcaagagacagaggaggacgaAGGGCATCCAGACAGCCAGTGCCAAATTAAAAAGTactgagcagtggtggaatatgAGTGAGTGCAGAAAATTTGTATTCAGGTACAAGTACAGTTAGactgttaaaatattttcagttaCAGACAAAACGTTGACACactgttacattgtttttctggaacaattattttcattaccaaTGAATCTGTTGATCATTTTGTCTGTTATCAGAAAAATATTCGTAAATAAAAAGTTGAAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640107.1 True 606 lncRNA 0.42 4 206557 213727

Neighbor

gene id symbol gene type direction distance location
LOC120563419 LOC107396773,LOC105929669,LOC106928452,LOC101167703,LOC102224045,LOC103152536 coding downstream 3630 200495 ~ 202927 (-)
LOC120563420 LOC106928452,LOC103152536,LOC101167703,LOC103466313,LOC102224045,LOC107092639,LOC107396773,LOC105929669 coding upstream 5199 218926 ~ 221857 (-)
LOC120563696 LOC102781631 coding upstream 61035 274762 ~ 288762 (-)
LOC120563704 NA coding upstream 167810 381537 ~ 441542 (-)
LOC120563705 NA coding upstream 234327 448054 ~ 472724 (-)
LOC120564601 rps17,LOC107389132,LOC108428414 coding upstream 753968 967695 ~ 984162 (-)
G80898 NA non-coding downstream 27819 178029 ~ 178738 (-)
G80895 NA non-coding downstream 41527 163947 ~ 165030 (-)
G80886 NA non-coding downstream 51054 154220 ~ 155503 (-)
G80885 lamb1,LOC100707779 non-coding downstream 84651 120277 ~ 121906 (-)
G80866 NA non-coding downstream 147379 58374 ~ 59178 (-)
G81047 NA non-coding upstream 125814 339541 ~ 484224 (-)
G81068 NA non-coding upstream 302148 515875 ~ 516643 (-)
G81074 NA non-coding upstream 326498 540225 ~ 542803 (-)
G81086 NA non-coding upstream 360458 574185 ~ 584567 (-)
G81097 NA non-coding upstream 381800 595527 ~ 596335 (-)
G80889 NA other downstream 57602 140689 ~ 148955 (-)
LOC120564180 NA other downstream 140679 52479 ~ 65878 (-)
LOC120563695 nup160 other upstream 40723 254450 ~ 290260 (-)
LOC120563703 frs2,LOC102791683,LOC102194035,LOC101482686,LOC101062095 other upstream 151898 365625 ~ 380890 (-)
tbc1d15 tbc1d15 other upstream 262862 476589 ~ 519373 (-)
G81072 LOC106573129,LOC106561542 other upstream 316522 530249 ~ 531894 (-)
G81085 NA other upstream 347936 561663 ~ 562279 (-)

Expression


Co-expression Network