LOC120564774


Basic Information

Item Value
gene id LOC120564774
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14807411 ~ 14808068 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640144.1
CGGGCCGATCAGGGAAACAGCACGGTGGAGAATCCTAAGTACATTGTGTGAAATAAAAGGATGAGATTGACTTTGGATGGATGTCGATGGATTTTGTGTGTAGCTGCCGACGCCAGTGTTTCCATGTGTTAGCGAGacatCAGAGTGACAAGTGTGTGACGTTGTGCGCTCCCCGGTGAAGCCCGTTTTTTTTTAGAGTCTGTATTCTGGGAAATGTAAGTGCTTTCTAAATCAAACTGTACATTTAAGAATCAACTGGAGTTTATTTTGAAGGTATattaatattgttttatttttgttttctgtcagtGTCCTTAGCCACTGCCGTATGTTTCGGATAATTTTgtgttaattattttatttattttttggtttagGCTTTTCTGCCAAATTGAAAATACTGCCAATGTTGCAGAAATAAACTAACCCCGAAGAAGTTATTGTGTCCTGTGTGGGTCTTAGTTCAGCAGGCTACACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640144.1 True 479 lncRNA 0.39 3 14807411 14808068

Neighbor

gene id symbol gene type direction distance location
sema3d sema3d coding downstream 12281 14757979 ~ 14795130 (-)
sema3ab sema3a coding downstream 99293 14683447 ~ 14708118 (-)
sema3e sema3e coding downstream 139911 14642838 ~ 14667500 (-)
LOC120563776 NA coding downstream 175108 14617291 ~ 14632303 (-)
LOC120563540 NA coding downstream 190053 14572731 ~ 14617358 (-)
elapor2a kiaa1324l,LOC104944050 coding upstream 95105 14903173 ~ 14919276 (-)
LOC120563915 LOC103375945,LOC104957331,LOC101467291,LOC102310371 coding upstream 165213 14973281 ~ 14990514 (-)
LOC120563916 NA coding upstream 196233 15004301 ~ 15012816 (-)
dnaja2b dnaja2,LOC103370603,LOC100703595,LOC101465466 coding upstream 243782 15051850 ~ 15057130 (-)
lmf2a lmf2,LOC102783784 coding upstream 290558 15098626 ~ 15105742 (-)
G84960 NA non-coding downstream 240142 14558458 ~ 14567269 (-)
G84776 NA non-coding downstream 442013 14365192 ~ 14365398 (-)
LOC120564348 NA non-coding downstream 522449 14283896 ~ 14284962 (-)
G84762 NA non-coding downstream 542425 14264725 ~ 14264986 (-)
G84761 NA non-coding downstream 543670 14263416 ~ 14263741 (-)
G84971 NA non-coding upstream 43652 14851720 ~ 14852023 (-)
G84948 NA non-coding upstream 146060 14954128 ~ 14955407 (-)
G85007 NA non-coding upstream 249657 15057725 ~ 15057929 (-)
G85011 ppp6r2 non-coding upstream 254543 15062611 ~ 15063137 (-)
G85027 NA non-coding upstream 370272 15178340 ~ 15179173 (-)
LOC120563775 cacna2d1,LOC104952157 other downstream 249183 14501896 ~ 14558228 (-)
LOC120564470 NA other downstream 570459 14223197 ~ 14236952 (-)
zgc:77752 NA other downstream 769695 14031104 ~ 14037716 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other downstream 1188625 13573831 ~ 13618786 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other downstream 1422206 13325973 ~ 13385205 (-)
si:ch1073-390k14.1 LOC103375950 other upstream 153792 14961860 ~ 14967783 (-)
G85014 ppp6r2,LOC103370604 other upstream 257971 15066039 ~ 15073350 (-)
ttc23 LOC104957250 other upstream 664866 15472934 ~ 15484145 (-)
G85133 mef2a,mef2aa,LOC107553916 other upstream 706710 15514778 ~ 15544082 (-)
chd2 chd2 other upstream 1347916 16155984 ~ 16187336 (-)

Expression


Co-expression Network