trnae-uuc_60


Basic Information

Item Value
gene id trnae-uuc_60
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 2517362 ~ 2517433 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_369
TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCCAGGTGGCCCGGGTTCAACTCCCAGTATGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_369 True 72 tRNA 0.54 1 2517362 2517433

Neighbor

gene id symbol gene type direction distance location
LOC120563454 NA coding downstream 150072 2366330 ~ 2367290 (-)
LOC120563451 NA coding downstream 159274 2357170 ~ 2358088 (-)
LOC120563453 NA coding downstream 184883 2330224 ~ 2332479 (-)
LOC120563455 NA coding downstream 203095 2286119 ~ 2314267 (-)
LOC120563449 NA coding downstream 236416 2279227 ~ 2280946 (-)
mphosph6 mphosph6 coding upstream 191083 2708516 ~ 2723969 (-)
LOC120564583 NA coding upstream 589657 3107090 ~ 3108199 (-)
LOC120564581 LOC104961227 coding upstream 594873 3112306 ~ 3130047 (-)
LOC120564582 NA coding upstream 600419 3117852 ~ 3122591 (-)
rxfp3.3b LOC101063184,LOC103379777,LOC104955911,LOC100691599 coding upstream 653338 3170771 ~ 3173157 (-)
trnak-uuu_14 NA non-coding downstream 72532 2444759 ~ 2444830 (-)
G81700 NA non-coding downstream 174807 2340405 ~ 2342555 (-)
LOC120563461 NA non-coding downstream 219314 2296238 ~ 2298048 (-)
G81695 NA non-coding downstream 219561 2296820 ~ 2297801 (-)
G81691 NA non-coding downstream 256053 2254987 ~ 2261309 (-)
trnak-uuu_15 NA non-coding upstream 13739 2531172 ~ 2531243 (-)
G81716 NA non-coding upstream 25081 2542514 ~ 2542867 (-)
G81717 NA non-coding upstream 31526 2548959 ~ 2549880 (-)
G81718 NA non-coding upstream 58137 2575570 ~ 2576163 (-)
G81721 NA non-coding upstream 66269 2583702 ~ 2591676 (-)
G81655 NA other downstream 404513 2110621 ~ 2112849 (-)
G81576 NA other downstream 852470 1613394 ~ 1664892 (-)
trnae-uuc_58 NA other downstream 956637 1560654 ~ 1560725 (-)
trnae-uuc_57 NA other downstream 957273 1560018 ~ 1560089 (-)
kcnj11l LOC103374924,LOC108251025,LOC106531031,LOC103466804,LOC106904500,LOC103148617,LOC102236473,LOC100711429,LOC101469628,LOC102296518,LOC102199411 other downstream 969178 1538139 ~ 1548184 (-)
G81726 LOC106531021,LOC102237407,LOC103130839,LOC107099816,LOC101479225,LOC103365994,LOC107389108,LOC106938894,LOC106907116,LOC103466381,LOC101173933 other upstream 152882 2670315 ~ 2678513 (-)
G81738 NA other upstream 167465 2684898 ~ 2685240 (-)
LOC120563733 NA other upstream 234805 2752238 ~ 2819413 (-)
G81832 NA other upstream 420319 2937752 ~ 2937990 (-)
fem1b fem1b,LOC102786726 other upstream 539106 3056539 ~ 3067921 (-)

Expression


Co-expression Network