G91887


Basic Information

Item Value
gene id G91887
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 455709 ~ 566466 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU123663
ATAAATATTAGTATAAAGTTAGCATAATATAAGTCCAGTACAAGCACCTAAAGCTGAAGTTAAAGTATCAGACTTCAGTGAATGTGTAGCTGCTGCCATCTGAGAatgtaaaaattaaattaaataaaaaaggagggATTTCTTTTTGTCGTTAACCCTTGTGTAGGAACTTTTGGTTTCTTTTAAACTATGCCGAATTTTAATTGTCCCAAAAATAACACTGTTAATGCCTCACAAACAACGCACATCACACACGGCAGGTCCACCGAAAAGATCAGAGCTCTAGTTTCATTTTTTAAGtgttaaaaataatgttttcaaaACAGTACCCtgactgaatgtgtgtgtgtgtctgttgactgtctgtctgtctgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtgtgtgtctgctgaccgtgtgtgtgtgtgtgtctgtgtgtctgttgaccgtgtgtgtgtgtgtctgtgttgactgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgttgaccgtctgtgtgtgtgtgttgactgtgtgtgtgtgtgtctgtctgtgtgtgtctgtctgtgtgtgtctgttgactgtgtgtgtgtgcgtctgttgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgcagactgtgtctgtgtgtgtgcgtctgttgattttgtgtgtgtgtctgttgactgtgtgtgtgtgtgtgtgttgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgactgtgtgtgtgtatgcgcgtgtgtgtgtccgtggtCAACAATGtcgagacaaaaaaaacagaatttaaAATTGCAGCACTTTTTAAGAATCTGTTTTTACAAACTTATGTAACATCAGTGTGAAAATAACGCACAAAACATCGCCACGAAAATGTAAATATGGGGtcatattttataataataaactttattaaTATAGCACTTTTATTAACAAcgttacaaagtgctttccagaaaaacagcaaataaaaagaaagtaaaataccaaaaacagagctgtcATAAAGCACCATATAcggtatatatgtatgtatgcatacacTTATTTTGACTTAAATTggactgtgagcaactgcaacttAACCTTTTCTCAACGTATTCTGCTTTCagttatttaaaatgtttatatctgttattttttaattactgtccagtgaaaaccttTTACCTTCAACATGTAAACAGaatccacatacagtacagtgctgctcatgactTTATGGACCCacgctaaagttgactaaaaagaggaataataaaaaatattttaaaaaatcatcttttggaaatttatcttaatgccttaattaaaaaaatttggaaaaatccaacctttaaaaGGAAACCAATTATCTTCGTGAATGATTAATGtattgtgaataaataaatgttcttccttaaaatacagggggcataagtcagtcagtccacccctatgttaaattcccatagaggcaggcagacttttattttgaaaggtcaGTTATTTCAttgatccaggatactatgcatcctgataaagttcccttggcctttggaattaaaatacccccccacatcatcacatacccttcaccatacccccccatcatcacatacccttcaccatacccccc
>TU123664
gtctctgtgtgtgtctctgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtatgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtggctgtgtgtgttacCCAGTGGGGAATACAGGAGCGTTCTCCTGCTGTCCTGGAGCGTCAACATGCAGGACTGAGAAATGCTGTGTCACTTCCTGCATGTCCTCGTAGTTAAACAGGCTGTTAAAGCAAGActt
>TU123665
ATAAATATTAGTATAAAGTTAGCATAATATAAGTCCAGTACAAGCACCTAAAGCTGAAGTTAAAGTATCAGACTTCAGTGAATGTGTAGCTGCTGCCATCTGAGAatgtaaaaattaaattaaataaaaaaggagggATTTCTTTTTGTCGTTAACCCTTGTGTAGGAACTTTTGGTTTCTTTTAAACTATGCCGAATTTTAATTGTCCCAAAAATAACACTGTTAATGCCTCACAAACAACGCACATCACACACGGCAGGTCCACCGAAAAGATCAGAGCTCTAGTTTCATTTTTTAAGtgttaaaaataatgttttcaaaACAGTACCCtgactgaatgtgtgtgtgtgtctgttgactgtctgtctgtctgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtgtgtgtgtgtgtgtctgtgtgtctctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtatgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtggctgtgtgtgttacCCAGTGGGGAATACAGGAGCGTTCTCCTGCTGTCCTGGAGCGTCAACATGCAGGACTGAGAAATGCTGTGTCACTTCCTGCATGTCCTCGTAGTTAAACAGGCTGTTAAAGCAAGActt
>TU123666
ctgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctctgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtctctgtctgtgtgtgtgtgtgtgtgtctgtgtgtctctgtctgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtttgtgtgtgtgtgtgtgtgtctctgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtgagtgtgtatgtgtgtctgtgtgtgtggttgtgtgtgtgtgtgcgtgtctctgtgtgtgtgtctctgtgtgtgtagtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtggctgtgtgtgttacCCAGTGGGGAATACAGGAGCGTTCTCCTGCTGTCCTGGAGCGTCAACATGCAGGACTGAGAAATGCTGTGTCACTTCCTGCATGTCCTCGTAGTTAAACAGGCTGTTAAAGCAAGActt
>TU123667
cgtgtctctgtgtgtgtttctctgtgtgtgtgtgagtttgtatgtctgtgtgtgtgtttgtgtgtgagtgtgtgtgtgcgcgtgtctctgtgtgtgtctctgtgtgtgtgtgagtgtgtatgtgtgtgtgtgtgtgagtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtggctgtgtgtgttacCCAGTGGGGAATACAGGAGCGTTCTCCTGCTGTCCTGGAGCGTCAACATGCAGGACTGAGAAATGCTGTGTCACTTCCTGCATGTCCTCGTAGTTAAACAGGCTGTTAAAGCAAGActt
>TU123668
ctgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtctgtgtatgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123663 True 1685 lncRNA 0.38 2 455709 457515
TU123664 False 360 lncRNA 0.50 3 565606 566466
TU123665 False 801 lncRNA 0.43 4 455709 566466
TU123666 False 699 TUCP 0.50 4 509141 566466
TU123667 False 389 lncRNA 0.50 2 565691 566466
TU123668 False 260 lncRNA 0.49 2 509141 532393

Neighbor

gene id symbol gene type direction distance location
LOC120565788 LOC100695038,LOC103366337,LOC107380922,LOC107082714,LOC105918713,LOC105028844,LOC106604646,LOC106611650 coding upstream 296252 141925 ~ 159457 (+)
stx6 stx6 coding downstream 217733 784199 ~ 808239 (+)
LOC120565732 NA coding downstream 220236 786702 ~ 787874 (+)
wdr18 wdr18 coding downstream 265775 832241 ~ 854498 (+)
grin3bb grin3b coding downstream 319893 886359 ~ 955236 (+)
med16 med16 coding downstream 417185 983651 ~ 1009213 (+)
G91877 NA non-coding upstream 3210 407787 ~ 452499 (+)
G91866 NA non-coding upstream 8540 364410 ~ 447169 (+)
G91879 NA non-coding upstream 44884 409455 ~ 410825 (+)
G91862 NA non-coding upstream 124688 330469 ~ 331021 (+)
G91857 NA non-coding upstream 165013 284398 ~ 290696 (+)
G92013 NA non-coding downstream 118269 684735 ~ 685052 (+)
G92015 NA non-coding downstream 127967 694433 ~ 694750 (+)
G92018 LOC103369104,LOC104936604,LOC101078280 non-coding downstream 155649 722115 ~ 773957 (+)
G92022 LOC104936604,LOC103369104 non-coding downstream 198988 765454 ~ 768674 (+)
G92027 NA non-coding downstream 250116 816582 ~ 818325 (+)
G91827 NA other upstream 32057 83806 ~ 423652 (+)
G91903 bmpr1a other downstream 14341 580807 ~ 593877 (+)
G92019 NA other downstream 155907 722373 ~ 758976 (+)
G92146 NA other downstream 602355 1168821 ~ 1170046 (+)
G92157 NA other downstream 636421 1202887 ~ 1204046 (+)
trmt13 NA other downstream 654344 1220810 ~ 1228679 (+)

Expression


Co-expression Network