G91895


Basic Information

Item Value
gene id G91895
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 509096 ~ 510112 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU123678
taactatattcgtggggcccaaaaaccgggagtccagtatacttgtggggtcccgacagctttgtggggccaaaatgctggaccccccaagtttaaagggctgtttgagggttaagacttggttttaggattatggttagaattaggttatggttagggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttagacatttagttgtgatggttaaggttagggtaaggggctagggaatgcattatgtcaatgactggtccccacaaagatagtgc
>TU123679
cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttagacatttagttgtgatggttaaggttagggtaaggggctagggaatgcattatgtcaatgactggtccccacaaagatagtgc
>TU123680
taactatattcgtggggcccaaaaaccgggagtccagtatacttgtggggtcccgacagctttgtggggccaaaatgctggaccccccaagtttaaagggctgtttgagggttaagacttggttttaggattatggttagaattaggttatggttagggtgagggtaagcgttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaaggggctagggaatgcattatgtcaatgactggtccccacaaagatagtgc

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes

RNA

RNA id representative length rna type GC content exon number start site end site
TU123678 False 308 lncRNA 0.45 3 509278 510112
TU123679 False 359 lncRNA 0.43 3 509096 510112
TU123680 True 527 lncRNA 0.43 3 509278 510112

Neighbor

gene id symbol gene type direction distance location
LOC120565788 LOC100695038,LOC103366337,LOC107380922,LOC107082714,LOC105918713,LOC105028844,LOC106604646,LOC106611650 coding upstream 349639 141925 ~ 159457 (+)
stx6 stx6 coding downstream 274087 784199 ~ 808239 (+)
LOC120565732 NA coding downstream 276590 786702 ~ 787874 (+)
wdr18 wdr18 coding downstream 322129 832241 ~ 854498 (+)
grin3bb grin3b coding downstream 376247 886359 ~ 955236 (+)
med16 med16 coding downstream 473539 983651 ~ 1009213 (+)
G91893 NA non-coding upstream 1820 506486 ~ 507276 (+)
G91892 NA non-coding upstream 8531 500088 ~ 500565 (+)
LOC120566002 NA non-coding upstream 43381 453142 ~ 465715 (+)
G91882 NA non-coding upstream 45981 460700 ~ 463115 (+)
G91877 NA non-coding upstream 56597 407787 ~ 452499 (+)
G91896 NA non-coding downstream 10375 520487 ~ 604831 (+)
G91899 NA non-coding downstream 42271 552383 ~ 553627 (+)
G91900 NA non-coding downstream 45189 555301 ~ 557470 (+)
G91901 NA non-coding downstream 47757 557869 ~ 558813 (+)
G92013 NA non-coding downstream 174623 684735 ~ 685052 (+)
G91827 NA other upstream 85444 83806 ~ 423652 (+)
G91897 NA other downstream 31579 541691 ~ 542909 (+)
G91903 bmpr1a other downstream 70695 580807 ~ 593877 (+)
G92019 NA other downstream 212261 722373 ~ 758976 (+)
G92146 NA other downstream 658709 1168821 ~ 1170046 (+)
G92157 NA other downstream 692775 1202887 ~ 1204046 (+)

Expression


Co-expression Network