G92018 (LOC103369104,LOC104936604,LOC101078280)


Basic Information

Item Value
gene id G92018
gene name LOC103369104,LOC104936604,LOC101078280
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 722115 ~ 773957 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU123856
tggtgcaaaggaccctagggtgaaattactccgaaccatcactttaacatgcgcaagttttggtttccgtagcagccaggtgcttgtgttgcagccatggagcccagtaagcggtgctctaatggggctttattttacgttgaaaaagccccgtcaaactgcaagccacctttgaatcaaaataaaactttcctcttatttgtgaaataagcatgtgacctgtttcaactccaccctcaaagaatcggaatcaagAATCGATAAAATCTAAATcatgcccaaccctagtataTAGTCAGAGTGAGACTTCCCGTCGCAAACACAGAGGGGAAAATAACGGACCAAGTTCAGGGTCTGAAGAGTGAAGCTAACGCAGAAGCtccttaaaaggtcccatggcatgaacatttcactctgagcttttttaacattaatatgcgttcccccccagcctgcttatggtcccccagtggctagaaatggtgataggtgtaaaccgagccctgggtatcctgctctgcctttgagaaaatgaaacctcagatgggccgatctggaatcttcataaggagcaagtttacctcccctttctctgctttgcccacccagagaatttggccaacccatgagagagacatcatggctttcaaacgagcaaagtggcagttggtcaaggccacaccccaccatccaccttgccaccCCTCTCTcatcctcaatagctacagacacagaaatggcacatcctaaggaaagctcattgtgggactggctctagtggctctaattctgcaccaaggctgaattatgggaaaCAAAGACTAGAAACAGGAGCGCTCACTCTGAGGAACTAAAGACTACAAACAGCTCTCACTCTGAGGAACTAAAGACTACAAACAGGAGCTCTCACTCTGAGGAAACGTTCAGAGCAGAAAGTGGAGTCGGCGGTTTTCTCGATTTGTTTAGAACAAGAAGTTCAAACATCGTTATTAAAGATTTACAGACATTTCCAAAacctggaaaataaaataaaacatcagttCAAACATCTGGACATCATTAGATTCAGTTCAAAACTTAAAACCAAACTTCATCTGGGCCGGGCCATACGGGGAACACTTTCTgactttaataaaatataaagtttataaaatacaccTTTCTTCATCTACTGATAAACAGCTGATGCTGCATTAGGGTTACTTTCCATCTGTTATGTAATataagggttatagttatgtgTGTAGCATGAACAggtatgtatatacacacatatataaatatatagatacatataATCTCTGTATGGCCCGTCCAGATGTTAATACCTGAAGTCAGTAAACCTGatatatgaaaataaataaaatgttacaacagtgaagaaaagaaaagtattCAGATAAAGTTCAGACAAAAACAgttgtcttttaaaaaacaccagagattaaaaacacatttaaatataaaatcaaaAACATCTGtggataaaaacatttaaaaagaaaagttgagaaataaaaacagctgCTGGGAGAAAAACACAGGAAATACTACACACAGTTCAATTAGTACAACTACTGGAAGTAGAACTGCTAACACCAAGTATTACTGGAAGTAGAACTGCTAACACCAAGTATTACTGGAACAACAGCTGTCAACATTACCCAAAATAACAtctgaagaaatgaaaaaggAGGATGGAACCAACACATCTAAAGGGGTGGAGTCAACACGCCCAATGACCAATCAGATCAGCTCtaccagtctgtgtgtgtgtgtgtgtgtgcgcgcgtctcTGTAGGAAACCGAGTGTTTAGATGACTgactgtgtgcatctgtgtgtctgtagaaaACAGAGCTTTTAGATgacttgtgtgtctgtctctgtgtgtctctgtaggaAACAGAGCTttagatggctgtgtgtgtgtgtgtgtgtgtaggaaacAGTGTTTAGATGGCTGTCTGTGTGACGTCGGATTGAGCTGAGTCGCTGAGCAGCGAAGAGAAGGGTGATGCAGACGGACGCAGTTATGCTGCTTCATCACTTTCATATTCAAACGTCTTAACGTTTATCTGAATTCAGACTATTGGTTGACAGCCGGACTCTGAAGTCAGTATTACTTCCAGTATCAGAACTTCTGGTGATACTAACTAGCCTGTTAGCATTAGCACTGCGCAGAGAAATATACTGTAATCCTACTGCGTCTGGCTCTGTTCAGTAGTACTGCAGTATCTTCTGAGTGTCCATTCACACCGTTGTTCTGCTGAGATGCAGTTCTAGTGGAACTATTTCCCTTCTTATATTATATTTCTGACTGGAGGAACTTCAGTATGCTCCCAGCTGGGTGTATATTCCTGCTACCTTCAGGGACAAATAAAGGTGTAGTACGCTCCGTGTCTTACCGCAGTCGTACTCTGATGTCTGGTGCTCTGCAGAACTTCGGGAGGAGTTACCTGCCACTTTGTCCCGGATCAGTTTGGCCGACTCCACGTCTCCCACGCTGCTGAACAGACTGCGCAGCTCGTCCTGACTCATGCTCTGGGGCAGGTAGTTCACGATCAGGTTGGTCCTGGCGTCCTCATCCTCCATCATCTGCTCGCTGTAGCCGTTATCATACAGCtcCTTTCCAGCGGCTCCTTTACAGTCTCTGACATCACTCTGAGACGTCTGAACCTCAcacacCTTCAGGTAGCGGATGTGTCCTCGTCTCAGTGCCATGGCAACGGTATCGtc
>TU123857
gctgtgtgtgtgtgtgtgtgtgtgtgaAACAGAGCTttagatggctgtgtgtgtgtgtgtgtgtgtaggaaacAGTGTTTAGATGGCTGTCTGTGTGACGTCGGATTGAGCTGAGTCGCTGAGCAGCGAAGAGAAGGGTGATGCAGACGGACGCAGTTATGCTGCTTCATCACTTTCATATTCAAACGTCTTAACGTTTATCTGAATTCAGACTATTGGTTGACAGCCGGACTCTGAAGTCAGTATTACTTCCAGTATCAGAACTTCTGGTGATACTAACTAGCCTGTTAGCATTAGCACTGCGCAGAGAAATATACTGTAATCCTACTGCGTCTGGCTCTGTTCAGTAGTACTGCAGTATCTTCTGAGTGTCCATTCACACCGTTGTTCTGCTGAGATGCAGTTCTAGTGGAACTATTTCCCTTCTTATATTATATTTCTGACTGGAGGAACTTCAGTATGCTCCCAGCTGGGTGTATATTCCTGCTACCTTCAGGGACAAATAAAGGTGTAGTACGCTCCGTGTCTTACCGCAGTCGTACTCTGATGTCTGGTGCTCTGCAGAACTTCGGGAGGAGTTACCTGCCACTTTGTCCCGGATCAGTTTGGCCGACTCCACGTCTCCCACGCTGCTGAACAGACTGCGCAGCTCGTCCTGACTCATGCTCTGGGGCAGGTAGTTCACGATCAGGTTGGTCCTGGCGTCCTCATCCTCCATCATCTGCTCGCTGTAGCCGTTATCATACAGCtcCTTTCCAGCGGCTCCTTTACAGTCTCTGACATCACTCTGAGACGTCTGAACCTCAcacacCTTCAGGTAGCGGATGTGTCCTCGTCTCAGTGCCATGGCAACGGTATCGtc

Function

NR:

description
PREDICTED: ELAV-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123856 True 2737 lncRNA 0.43 4 769473 773957
TU123857 False 862 lncRNA 0.49 4 722115 773957

Neighbor

gene id symbol gene type direction distance location
LOC120565788 LOC100695038,LOC103366337,LOC107380922,LOC107082714,LOC105918713,LOC105028844,LOC106604646,LOC106611650 coding upstream 562658 141925 ~ 159457 (+)
stx6 stx6 coding downstream 10242 784199 ~ 808239 (+)
LOC120565732 NA coding downstream 12745 786702 ~ 787874 (+)
wdr18 wdr18 coding downstream 58284 832241 ~ 854498 (+)
grin3bb grin3b coding downstream 112402 886359 ~ 955236 (+)
med16 med16 coding downstream 209694 983651 ~ 1009213 (+)
G92015 NA non-coding upstream 27365 694433 ~ 694750 (+)
G92013 NA non-coding upstream 37063 684735 ~ 685052 (+)
G91896 NA non-coding upstream 117284 520487 ~ 604831 (+)
G92027 NA non-coding downstream 42625 816582 ~ 818325 (+)
G92029 NA non-coding downstream 50617 824574 ~ 826046 (+)
G92062 NA non-coding downstream 86516 860473 ~ 860703 (+)
G92066 NA non-coding downstream 126264 900221 ~ 984045 (+)
G92093 NA non-coding downstream 190811 964768 ~ 965650 (+)
G91903 bmpr1a other upstream 128238 580807 ~ 593877 (+)
G91887 NA other upstream 155649 455709 ~ 566466 (+)
G91897 NA other upstream 179206 541691 ~ 542909 (+)
G91827 NA other upstream 298463 83806 ~ 423652 (+)
G92146 NA other downstream 394864 1168821 ~ 1170046 (+)
G92157 NA other downstream 428930 1202887 ~ 1204046 (+)
trmt13 NA other downstream 446853 1220810 ~ 1228679 (+)
G92169 dbt,LOC102778223 other downstream 467430 1241387 ~ 1256194 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other downstream 689762 1463719 ~ 1535856 (+)

Expression


Co-expression Network