G92027


Basic Information

Item Value
gene id G92027
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 816582 ~ 818325 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU123874
CTGGTCAAcgtttctttattttgtcagaaaatataaacataaaaatccATGAGACTGAAATACTGCAGACatttaaatactgtaaatatatgtACAACACTCTTACTGCGTGAAACAACATCACTTTGTATCACTTTATCTTTTTATTAAACCTGACAGCAGGTCTGAAGAGAAAATTAAACAAGAAtccaaaacagagaaaagcttAATTTAAAGTCAGCTGATGTGTCGTAAAGTGTCATCTCCACCTCTGAGTTTACGTTACTCAGACTCCATCTCCACCTCTACGTTACTCAGACTCCATCTCTGAGTCTACGTTACTCAGGctccatctccacctctgagTCTAAGTTACTCCGAatccatctccacctctgagTACCACTATACTGCCGTCAGTCAGTGAGAAAACAAGCCGGTATATGTTTGTCGGTAACAGTAGGTGGCTGCAACGCTCCTCCCAGCTGCAGTTTACCATTaaacaaaataagaataatTTCCTGTCAGTGCAACACTACCCTGTCGAAACTTAATGCACTGCACAAGTGTGCACAGAGTACTACATGTACTGTAAGTACCCTCACTGAAGTATTTAGATTGAGACAAACTGCTGAACTTTGTCAGACTGTCTGAGTGGAACGTCTTCTTCACTTCATGTAGAACAGCTATCACAAATTCTGGTCAGTCCGCTGTTCTCTTCACAGAGATCtagagttcagttcactttaggTGAGAACGACCCAacccaaatacaggaagagaaccaaaaacataatttactagctgcagtttcaacctttcacacagtttacagacttaGGTCGCTTTCACACCTGTAGCTCTGTAGACTTGCCATTCAGGGATGAAGATTATGCATTGCTGCGTTTCTCATTTGGTTGTTTGCATTCAcgctgcactttgtcaaacaccaaacattgtaaacaaatgCCAGCCAGTATAACAAAGGcttgggttttctggttctgctttaatGTTTCTAATGTTTAAGAAGAAGACAAACAATGTGAGCATGTTTGgtgtttgacaaagtgcagcgTGAATGCTAACACAACCAAATGTACCTTAACCCCGAGTCTACAGAAGAACAGGTGTGAACGTGTTCTAAGTTCTGGCTGGACCAGAAGCAGCTCAGCAGTTTGATGCCGTTTTTGTGGAAGTTGCAGTGAAGTTAAAGTTTCTTTCCGGTTCACTTGTTCTCTAAGTGTTGGTCTGACCAGCGGATCAGGTCCTGTGGCTTCACTCAGTCAGCGTTCTGGTCGTTCTGGTTGTTTTTGCAGTTAGGTGGTTGTAGCAGTGTCTGTTCAGCGTGGAGGCGTCCTGTGGTGCCGAAGCACCCGGACTGTAGCAGAGGGGTTCTGGGTCAGCAGCTGGGTCACCTGGTCCAGACTCTGACAAGCCACTTTCTCCCCGTTCACCTCCAGGATCTCGTCTCCCAACGCCAACAGGCCGGCATACAACTTCTCCGTGCCACTGTCCACCATGTCCTCCACATAAACACCTGCAGGACACACATTGTTAATGAGCTGCGAACTTAATACGTTAACCCATCTACAGATGATCCAGAGTAAAACTGCTCTgcactagctatgtttccatccacttgtcaatcgagtTATCTGAAGTTTTCTAAAAACATTCATGCAAATAAAGCCGGTgaaagtttgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123874 True 1688 lncRNA 0.43 2 816582 818325

Neighbor

gene id symbol gene type direction distance location
stx6 stx6 coding upstream 8343 784199 ~ 808239 (+)
LOC120565732 NA coding upstream 28708 786702 ~ 787874 (+)
LOC120565788 LOC100695038,LOC103366337,LOC107380922,LOC107082714,LOC105918713,LOC105028844,LOC106604646,LOC106611650 coding upstream 657125 141925 ~ 159457 (+)
wdr18 wdr18 coding downstream 13916 832241 ~ 854498 (+)
grin3bb grin3b coding downstream 68034 886359 ~ 955236 (+)
med16 med16 coding downstream 165326 983651 ~ 1009213 (+)
plppr3b NA coding downstream 192422 1010747 ~ 1025143 (+)
LOC120566171 LOC108248660 coding downstream 504080 1322405 ~ 1380914 (+)
G92018 LOC103369104,LOC104936604,LOC101078280 non-coding upstream 42625 722115 ~ 773957 (+)
G92022 LOC104936604,LOC103369104 non-coding upstream 47908 765454 ~ 768674 (+)
G92015 NA non-coding upstream 121832 694433 ~ 694750 (+)
G92013 NA non-coding upstream 131530 684735 ~ 685052 (+)
G91901 NA non-coding upstream 257769 557869 ~ 558813 (+)
G92029 NA non-coding downstream 6249 824574 ~ 826046 (+)
G92062 NA non-coding downstream 42148 860473 ~ 860703 (+)
G92066 NA non-coding downstream 81896 900221 ~ 984045 (+)
G92093 NA non-coding downstream 146443 964768 ~ 965650 (+)
G92094 NA non-coding downstream 150666 968991 ~ 1063760 (+)
G92019 NA other upstream 57606 722373 ~ 758976 (+)
G91903 bmpr1a other upstream 222705 580807 ~ 593877 (+)
G91887 NA other upstream 250116 455709 ~ 566466 (+)
G91897 NA other upstream 273673 541691 ~ 542909 (+)
G91842 NA other upstream 473890 257904 ~ 342692 (+)
G92146 NA other downstream 350496 1168821 ~ 1170046 (+)
G92157 NA other downstream 384562 1202887 ~ 1204046 (+)
trmt13 NA other downstream 402485 1220810 ~ 1228679 (+)
G92169 dbt,LOC102778223 other downstream 423062 1241387 ~ 1256194 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other downstream 645394 1463719 ~ 1535856 (+)

Expression


Co-expression Network