G92029



Basic Information


Item Value
gene id G92029
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 824574 ~ 826046 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU123876
GTCCATTACTGCTTCCTGAGGGGGGTGGGGCCTGGCTCTCAgCTGTTGTCTCTGAGCTCTTCGCCTTCAGATCCACACTGCTCCTCTCTGTCACCTTGGCGCAGGATCGGAGCTCTCTGTGGGGCTCGGGTGCAGACATTCCCTGCTCCTCCCGGCTCTGGCTCTGGTTGTAGTTTAGATTCTGCTCTGCTTTTGTGCCGTTGAGCCTGACGCTCTGAGGAGACGAGGAGGATCTGGAGAGGGGTGTGGCCAGCTGCTGGGGGGCATAGGGGTTTATTGGCAGGTCTGTGGTGGGCATGTCCTGATTGGTGCTCCTCCTCTCGCCCCCTGCCCCACTTCTATCACACGCTGTCACAGAGCCAATGTAGGTCTCTCTGATTGGCTCGGTCCGCAGGCTGAGGTGGGGTCTGTACAGACTTCGCCCACGCTCCTCAGGGTCAGGTGGCTGTAAACAGGGTTTCAGGCTGACTCTGCCTCTCAGAACCGTCCCACAGGAGTCCCACTGAGCCATCCGTCCTCTGTGCTGTCTGTCAGCAGCAGGCCCTGCCCCCAGCTGATCATGAGGCCCTGACCCCTGCAGCCCTGTCCCCTGGTGTCCATGTGCCCCCTGCAGCCCTGTCCCCTGGTGTCCATGTGCCCCCTGCAGCCCTGTCCCCTGGTGTCCATGTGTCCCCTGCAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU123876 True 679 lncRNA 0.62 2 824574 826046

Neighbor


gene id symbol gene type direction distance location
stx6 stx6 coding upstream 16335 784199 ~ 808239 (+)
LOC120565732 NA coding upstream 36700 786702 ~ 787874 (+)
LOC120565788 LOC100695038,LOC103366337,LOC107380922,LOC107082714,LOC105918713,LOC105028844,LOC106604646,LOC106611650 coding upstream 665117 141925 ~ 159457 (+)
wdr18 wdr18 coding downstream 6195 832241 ~ 854498 (+)
grin3bb grin3b coding downstream 60313 886359 ~ 955236 (+)
med16 med16 coding downstream 157605 983651 ~ 1009213 (+)
plppr3b NA coding downstream 184701 1010747 ~ 1025143 (+)
LOC120566171 LOC108248660 coding downstream 496359 1322405 ~ 1380914 (+)
G92027 NA non-coding upstream 6249 816582 ~ 818325 (+)
G92018 LOC103369104,LOC104936604,LOC101078280 non-coding upstream 50617 722115 ~ 773957 (+)
G92022 LOC104936604,LOC103369104 non-coding upstream 55900 765454 ~ 768674 (+)
G92015 NA non-coding upstream 129824 694433 ~ 694750 (+)
G92013 NA non-coding upstream 139522 684735 ~ 685052 (+)
G92062 NA non-coding downstream 34427 860473 ~ 860703 (+)
G92066 NA non-coding downstream 74175 900221 ~ 984045 (+)
G92093 NA non-coding downstream 138722 964768 ~ 965650 (+)
G92094 NA non-coding downstream 142945 968991 ~ 1063760 (+)
G92095 NA non-coding downstream 144827 970873 ~ 971521 (+)
G92019 NA other upstream 65598 722373 ~ 758976 (+)
G91903 bmpr1a other upstream 230697 580807 ~ 593877 (+)
G91887 NA other upstream 258108 455709 ~ 566466 (+)
G91897 NA other upstream 281665 541691 ~ 542909 (+)
G91842 NA other upstream 481882 257904 ~ 342692 (+)
G92146 NA other downstream 342775 1168821 ~ 1170046 (+)
G92157 NA other downstream 376841 1202887 ~ 1204046 (+)
trmt13 NA other downstream 394764 1220810 ~ 1228679 (+)
G92169 dbt,LOC102778223 other downstream 415341 1241387 ~ 1256194 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other downstream 637673 1463719 ~ 1535856 (+)

Expression



Co-expression Network