G92071


Basic Information

Item Value
gene id G92071
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1103192 ~ 1301580 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU123937
CTCAGTCAGTTCCACACTCTGGTGAGTTCAGGTCAAACTTTGAAACAACCAACATCTGTTTCCTACATCTGGAATCAGCCTTTAAACTCTGGTagattttcagaataaaacacACTGCAGACACTGTTAAAGggctacttttattttgaaagaatcATAAAAATTAGTGTTTCAGTACAgcgtgtgtttttctgtgtgtctgtgtgtgtctctgtgtgtgtctctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgcgtgtgtgtgtgtg
>TU123938
CTCAGTCAGTTCCACACTCTGGTGAGTTCAGGTCAAACTTTGAAACAACCAACATCTGTTTCCTACATCTGGAATCAGCCTTTAAACTCTGGTagattttcagaataaaacacACTGCAGACACTGTTAAAGggctacttttattttgaaagaatcATAAAAATTAGTGTTTCAGTACAgcgtgtgtttttctgtgtgtctgtgtgtgtctctgtgtgtgtctctctgtgtctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctcttgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgttttctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgcgtgt
>TU123940
agacacacacacacacacacacacacacagagacacacacagacacacacacacacagagacacacacacacagagacacacagagacacacacacagacacacacacacagagacacacacacacagagacacacacacagagacacacacacagagacacacacagagacacacacagagacacacacacacagagacacacacacacagagacacacacacacacacagagacacacacacacgcacacacacagagacacacacacacacacacacacacagagacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacg
>TU123942
acagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgcgttttgggtgtgtgtgtgtgtgtctatgtgtgttttgggcgtaacatcaAAATAAATGACATCTTTAACACATTTATGGCTTTAAGAAGTTGTAACATTATGAAGACAAAGTCATTATTCAGagaaaaagcccaaatattctCAGAACTGAAGTGAGAGTGACTCCGAAACATGAAAGAGTGTTTGTCTATAAACGATGACTTCATGTGAACAAGGTTACAGCCTCTAAACGTCTCGTTAACGTTTCCCCGATCGATAAAGGTTAATTCAAAAGGTACCAAAGATCAGGCTCATaccagaatttaaaaaaaggacaaaaatcaaaataaataaataagttaaagattgaaatgtgttgatttttaGAGCCGACAGGCCGAAATAAAAGAGGACAACTTTCATCAGCACTACAACTCCCAGAaggcactgctgctgctgcagagagCGGGAAACCCCTCTGTCGCCGGGCAGATTAACTCcttataaaatattatttaaaaaaaataaaaaataaaagacttttGGATTAATTCACTTTGAGAtttttgggctctgggaaagAGACCGCCCCCCGAGAGCAGAGgctcatgggaaatgtagtcttTAGAGCCAGGCACGGACCGGACGCTGCCGCTTGGACAGAATCAACAATAATCAGTTGCTAGGCAACATGTGCTCCCAAAAAACATCACGGCAACACAATCATACGCGTGAAATTAAAAACTCTGCTGGATCAAAACTTTATCTGGAACGCCACAGCTAACGCTACGGGACAAGCTAACGCTACGGGACAAGCTAACGCTACGGGACAAGCTAATTCTACGTAAAACAAGCTAATGCTACATAACAAGCTAATGCTACGTAAAAAAAAGCTAACGCTACGTAACAAGCTAATGCTACGGGACAAGCTAACGCTACGTAGCAAGCTAACGCTACGTAGCAACCCCCGCCCTCTGGTTATTACAGCGTGATTGCGATCGTTGCCCAGAGACAGACATCGTGTTGTTCAGAGAAACGACGATGATTCTAAagtttgttttctgaaaatattgaataaaaaaaataaaaatagttctGATCCAgcagacaggaagtgacatcacacAGGTGCAGGAAACGGTTTCTTATTTTAGGGAGGGGAACCGGTTCTGTACGGGGATCACAGACACACCCCAAACATCAGCTTCTAACGTTTAAATTCtcaaatatttaataaaaaaaactaaaagaggAAGTGACATCACACATGTGCAGGAAACCGTTTCTTATTTCAGAGAGCAGAACCTGGACTTCCTGTCTCTCCTGCCCTTCAGAATAAGAGCGCCTGTGACTCATCGGAATGTTCTTGCCGATTCTGGCGCCCCCCGTCGGTGCGGTTGGGGCGTAGCCGTGGCACCGGTGGGGGCGTAGCCGTGGCGACGGGTCAGAACTCCACCTTGCAGGCGGGGAAGGTCTCGTCCTGCATGGCCACGGTGCTGTTGCTGCCCAGCACGGTCAGCGCCAGAGCCCTCTGCCGGTCCTGGGTCTCCTGGTACCACTGGTGCATCGCCAGCGAATCAAACGTCGGGATCAGGGTCACCTGGGCACACAGCGGGGGACacggaccaatcagagagcagagcaCAGGGAGGTAGAGACATACAgcggaccaatcagagagcagagcaCAGGGAGGTAGAGACATACAgcggaccaatcagagagcagagcaCAGGGAGGTAGAGACATACAgcggaccaatcagag
>TU123943
aaacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacagagacacacacacacagagacacacacacagagacacacacacacacagacacacacacacacacacacagacacacacacacacacagagacacacacacagacacacacacacagacacacacacacacagagacacacacacacacacacacacacacacacacatacacacacacacagc
>TU123944
ctgtgtgtctgtgtgtgtgtgtgtgtgggtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtctgtgtgtgtgtgtctgtctctgtgtgtgtctgtgtgtg
>TU123945
AAACAGAGACacacacagacacacacagacacacacacacagagacacacacacacagagacacacacacagagacacacacacagagacacacacagagacacacacagagacacacacacacagagacacacacacacagagacacacacacacacacagagacacacacagagacacacacacacagagacacacacagagacacacacacacagagacacacacacagacacacacacacagacacacacacacacagagacacacacacacacacacacacacacacacacatacacacacacacacacacacacacagatacacacacacacacacacacacagatacacacacaaaagtgtaaactgtctctgtgtctctgtgtctctgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgcgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123937 False 346 lncRNA 0.43 3 1189789 1217204
TU123938 False 1021 lncRNA 0.47 4 1189789 1301580
TU123940 False 387 lncRNA 0.50 5 1205083 1237968
TU123942 True 1843 lncRNA 0.46 4 1128723 1192296
TU123943 False 363 lncRNA 0.49 2 1218488 1219449
TU123944 False 155 lncRNA 0.51 4 1216590 1241364
TU123945 False 723 lncRNA 0.49 8 1103192 1301580

Neighbor

gene id symbol gene type direction distance location
plppr3b NA coding upstream 78049 1010747 ~ 1025143 (+)
med16 med16 coding upstream 93979 983651 ~ 1009213 (+)
grin3bb grin3b coding upstream 147956 886359 ~ 955236 (+)
wdr18 wdr18 coding upstream 248694 832241 ~ 854498 (+)
LOC120565732 NA coding upstream 315318 786702 ~ 787874 (+)
LOC120566171 LOC108248660 coding downstream 20825 1322405 ~ 1380914 (+)
LOC120565564 LOC102210819 coding downstream 236419 1537999 ~ 1574777 (+)
LOC120565565 LOC108250349,LOC108249964 coding downstream 323994 1625574 ~ 1630680 (+)
sid1 NA coding downstream 334383 1635963 ~ 1637498 (+)
serpinc1 NA coding downstream 589974 1891554 ~ 1908999 (+)
G92094 NA non-coding upstream 39432 968991 ~ 1063760 (+)
G92111 NA non-coding upstream 40560 1047536 ~ 1062632 (+)
G92109 NA non-coding upstream 57093 1045663 ~ 1046099 (+)
G92066 NA non-coding upstream 119147 900221 ~ 984045 (+)
G92095 NA non-coding upstream 131671 970873 ~ 971521 (+)
G92177 NA non-coding downstream 11423 1313003 ~ 1357868 (+)
G92076 NA non-coding downstream 55298 1356878 ~ 1407682 (+)
G92075 NA non-coding downstream 67442 1369022 ~ 1651313 (+)
G92069 NA non-coding downstream 79748 1381328 ~ 1385015 (+)
G92084 NA non-coding downstream 83818 1385398 ~ 1402927 (+)
G92019 NA other upstream 344216 722373 ~ 758976 (+)
G91903 bmpr1a other upstream 509315 580807 ~ 593877 (+)
G91887 NA other upstream 536726 455709 ~ 566466 (+)
G91897 NA other upstream 560283 541691 ~ 542909 (+)
G91842 NA other upstream 760500 257904 ~ 342692 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other downstream 162139 1463719 ~ 1535856 (+)
G92201 NA other downstream 277375 1578955 ~ 1910061 (+)
G92234 NA other downstream 395394 1696974 ~ 1804395 (+)
G92264 NA other downstream 566072 1867652 ~ 2000993 (+)
LOC120565570 NA other downstream 566141 1867721 ~ 1889087 (+)

Expression


Co-expression Network