G92201


Basic Information

Item Value
gene id G92201
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1578955 ~ 1910061 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU124117
GCATATCTCCAGaccccatgtaaataatcaggacttttatcatggtaaaacacacttcattcaaagtggacagaaactaaataaaactaccaaaagccgtcttggttcatctttcaacAATcatcactctggtttggttgaaataaacccttaattcacccatttacatgtggagatatgctaaCTCTATACCGCGCTAAaattctgattatttacatggagtctggtggagatatgctaactctatacacgctaaaaatcctgattatttacatggagtctggtggagatatgctggctctatacacactaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagtttggtgatggtgatttcggggctgtttcatgttaaactaaaaggatcttactctttaacagaacgCTCTAGACATTACCAGGTTGTAAAAACTGACCCTTTAATgagtgtacatacatacatacatgtaatgTGTATACCATGAAATATATACATGTCTCCGCCCCCTGCCCAGGGAATTGTGGGTAAATAAAAGAGGCGAGTCAGTGGCGGTCGACActttaaagtgctttatttcCTCAGGAGGAGACCTGTGAGTGATCTAGTGGTCATGGTGAAAGAAGCTTCTTCACATTTTTCTAAACTAATGT
>TU124120
agaggatgCTTCAGTCTCAGTTCCCACCTCTGCAGATCTTTCATTGTCTCAGTTTATCTGATCTGAACCACAGAGACAGAGTCTGGTCCACTTAGTACATTTGACTGTTTCTGACTTTTGTTAAAGGGTCACTTTTGGTAggtttggtgatggggattttGGGGCTGTTCCATGTTAAACTAAACAACTACACTTGTTgcacccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcgggacttttagcgtgtatagagccagcatatctccaCCAGaccccatgtaaataatcaggacttttatcatggtaaaacacacttcattcaaagtggacagaaactaaataaaactaccaaaagccgtcttggttcatctttcaacAATcatcactctggtttggttgaaataaacccttaattcacccatttacatgtggagatatgctaactctatacacgctaaaaatcctgattatttacatggagtctggtggagatatgctggctctatacacactaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagtttggtgatggtgatttcggggctgtttcatgttaaactaaaaggatcttactctttaacagaacgCTCTAGACATTACCAGGTTGTAAAAACTGACCCTTTAATgagtgtacatacatacatacatgtaatgTGTATACCATGAAATATATACATGTCTCCGCCCCCTGCCCAGGGAATTGTGGGTAAATAAAAGAGGCGAGTCAGTGGCGGTCGACActttaaagtgctttatttcCTCAGGAGGAGACCTGTGAGTGATCTAGTGGTCATGGTGAAAGAAGCTTCTTCACATTTTTCTAAACTAATGT
>TU124121
GCATATCTCCAGaccccatgtaaataatcaggacttttatcatggtaaaacacacttcattcaaagtggacagaaactaaataaaactaccaaaagccgtcttggttcatctttcaacAATcatcactctggtttggttgaaataaacccttaattcacccatttacatgtggagatatgctaactctatacacgctaaaaatcctgattatttacatggagtctggtggagatatgctggctctatacacactaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagtttggtgatggtgatttcggggctgtttcatgttaaactaaaaggatcttactctttaacagaacgCTCTAGACATTACCAGGTTGTAAAAACTGACCCTTTAATgagtgtacatacatacatacatgtaatgTGTATACCATGAAATATATACATGTCTCCGCCCCCTGCCCAGGGAATTGTGGGTAAATAAAAGAGGCGAGTCAGTGGCGGTCGACActttaaagtgctttatttcCTCAGGAGGAGACCTGTGAGTGATCTAGTGGTCATGGTGAAAGAAGCTTCTTCACATTTTTCTAAACTAATGT

Function

GO:

id name namespace
GO:1901564 organonitrogen compound metabolic process biological_process
GO:0009072 aromatic amino acid family metabolic process biological_process
GO:0044421 obsolete extracellular region part cellular_component
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU124117 False 714 lncRNA 0.39 2 1909232 1910061
TU124120 True 968 TUCP 0.40 4 1578955 1910061
TU124121 False 657 lncRNA 0.39 3 1909232 1910061

Neighbor

gene id symbol gene type direction distance location
LOC120565564 LOC102210819 coding upstream 4178 1537999 ~ 1574777 (+)
LOC120566171 LOC108248660 coding upstream 198041 1322405 ~ 1380914 (+)
plppr3b NA coding upstream 553812 1010747 ~ 1025143 (+)
med16 med16 coding upstream 569742 983651 ~ 1009213 (+)
grin3bb grin3b coding upstream 623719 886359 ~ 955236 (+)
LOC120565574 NA coding downstream 70777 1980838 ~ 1993868 (+)
dph5 dph5,LOC102795811 coding downstream 140901 2050962 ~ 2071903 (+)
LOC120565427 NA coding downstream 502170 2412231 ~ 2420605 (+)
LOC120565428 NA coding downstream 513926 2423987 ~ 2427127 (+)
LOC120565432 NA coding downstream 540470 2450531 ~ 2461597 (+)
LOC120565414 NA non-coding upstream 83588 1494808 ~ 1495367 (+)
G92080 NA non-coding upstream 102176 1458163 ~ 1476779 (+)
LOC120565412 NA non-coding upstream 142341 1433658 ~ 1436614 (+)
G92183 NA non-coding upstream 166084 1391329 ~ 1412871 (+)
G92076 NA non-coding upstream 171273 1356878 ~ 1407682 (+)
G92274 NA non-coding downstream 42925 1952986 ~ 1953927 (+)
G92275 NA non-coding downstream 49791 1959852 ~ 1960134 (+)
G92276 NA non-coding downstream 72456 1982517 ~ 1983028 (+)
G92279 NA non-coding downstream 99207 2009268 ~ 2048527 (+)
G92281 NA non-coding downstream 99918 2009979 ~ 2010670 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other upstream 43099 1463719 ~ 1535856 (+)
G92169 dbt,LOC102778223 other upstream 322761 1241387 ~ 1256194 (+)
trmt13 NA other upstream 350276 1220810 ~ 1228679 (+)
G92157 NA other upstream 374909 1202887 ~ 1204046 (+)
G92146 NA other upstream 408909 1168821 ~ 1170046 (+)
LOC120565575 NA other downstream 78747 1988808 ~ 2025931 (+)
G92293 NA other downstream 162121 2072182 ~ 2076104 (+)
G92333 NA other downstream 455838 2365899 ~ 2369672 (+)
reep6 reep6 other downstream 461927 2371988 ~ 2380260 (+)
G92575 NA other downstream 623683 2533744 ~ 2582371 (+)

Expression


Co-expression Network