LOC120565570


Basic Information

Item Value
gene id LOC120565570
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1867721 ~ 1889087 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU124204
cagagttCTGTCTGAGAGTGGCTGTTTCCTCCTGGTCCTGTTCGGTTCGACCCACCGAGCTCCTCAGTTCTTCCAGTGTCGAGGATCAGCATCTGGACCACAGCTGGACTACCGCCTGCTGACCGCCTCCCAGTGCGTCACACTCTACCAGCAGGCGGTCTCGGTGGAGGGTCAGACTCTGCGCTGTGAGCTCGGCTCAGAGGATCACAGCCGCCAGACGGAGGTCTTCAGAGAGGCTCAGACCTCCTTCAAC
>XM_039811456.1
GGTTGCTTCGCCCCCGCCAGTTGGCTGTAGAAACAGCGCCATTATCAAACAGCGTTCATCTTGTTGTTCTTTTCGGGTTGTTTACGGACAAACTTTCATAAATAGGTTCAGATAAACGGAGGTAAACTCAAAGTTTGTGACTTTATTAGATGTTTAGTTATCGTCCGGATGACGCGAGCTTCGTCGCATGTGAAGCTAACGGAGGGAGCTAACGAAGCTAACGGAGGTAGCTAACGGGGCTAACTTGTAGCAGTTGTAAGCTGAACTCTCGAGCCGCGGTGTTTCCTGCGTTGAGTGTCCGTTGGTAGAGTTGCCTTGTCGGCCACATCAGGGATGAGTTGCCCGGTGAACCTCCAGGATCTTCCGTCCGGAGTGTTTGAAACGGTTTTTACTCCAGAAAACGTGAGAGTAAGGACCATGAACTCTCTGACTCCGCTCAGCTTCCCCAAAACCAGATCAGCTCTGTGGGACGGCAGCCCTGCAGGAGACAAGCTCCGCCTCCAGCTCGGCactcacagGAAGCCTCGGCTGGTGCTGctggagaaagctctgcgtctGGCTCAGCGTCACGCCCGTCACAGCAACAAGCCCCGCCTCCTGTGTTTCCTCCTGGGCTCGCTGTGTGTCGACGCAGATGAGGGAGGGGTCACTGTGACTCTGGACCGGTGACCCGGTCGGGACCAGCCGAGCCTCGGGCGGGGTCCCCACCCGCTGCTGCCCGGAGACGTCCTGGTTCCCTGTCTGTTCTCCTCAGAGACTGTCCCCTCGTCTGACGCCGTCGTCCAATCAGAGGCTGAGCTGCATCACTGCTTCAAGgtgTTGCAGCAGTGCGTGAGCGGCAGACAGTCTCTGGACCTGTCTCAGCTGTTGAGGGTCAGAGGTCGGGTGGTCTGCTGTCAGCAGTCTGACTCCGCGGCGTTCTCCCTCAGCTGGGCGGCCGTGTGTCCGTCTGTCAGCGTGGAGGTCCAGCCGGTCCGAGCCGTCCCCGTCATCCCCACGGCTCTGCTGAGGAGTCTGACCGGCGCCACCCGCCCACCGCTGCACGCCAACCGGCAGAGAGGgttTCTGACCATGGATCAGACCaggaagctgctgctgctgctggagtctGATCCTAAAGCCCTCCAACCGCCGCTGGTCGGACTCTGGCTGAGTGGAGTCGTTCACGTCTCCAACCCTCAGGTGTGGGCCTGGTGTCTGAGGTTCCTGTGTAGCTCGGGCCTCCCCAGGACAGttCTGTCTGAGAGTGGCTGTTTCCTCCTGGTCCTGTTCGGTTCGACCCACCGAGCTCCTCAGTTCTTCCAGTGTCGAGGATCAGCATCTGGACCACAGCTGGACTACCGCCTGCTGACCGCCTCCCAGTGCGTCACACTCTACCAGCAGGCGGTCTCGGTGGAGGGTCAGACTCTGCGCTGTGAGCTCGGCTCAGAGGATCACAGCCGCCAGACGGAGGTCTTCAGAGAGGCTCAGACCTCCTTCAACAGAACTTGTCTCCCCCGCCCGTCCCCGAGCCCCCACCTCCCCGCTCAGCAGGCTCGCAGAGTTCAGCCGTCTGTTCCTGAACTTTCTCTGCTGATTGACAGCGCTGCCGTCTCAATCACAACAGCTGGCAGGAGGCGGCCCGCCCcaggcctgctgctgctgctgacaggaAGTCCGCCCCTCCAACACCTACGCTGCTCCCAtccccaccacctcctcctcctcctcccatcacCATCCACCTGTTTCTGTTCCTCCACCCTCCATCCATGGCtctgccccccctcctccctgtcCCTGCAGCcaccctccccccaccccacgGTGTGGAGactcctctcttccctccccTCGGTGTGGGagactcctcctctcttccctctccaCGGTGTGGAGACTCCTCCCCTCACGGTGTGGAgactccccctctcttccctccctcGGTGTGGAGAacctccctctcttccctcccCTCGGTGTGGGgaactcctcctcttcctcacccgTCCCATCCCGCAGCAGCAGCCTCTGTGTCTTCCTCCTGTGTGCATCATCAAGGGGGGAGGAGTCATCCCATCTGACACATATAACAGCTGCTCCTCCATCAGGGACCGACAGCTCCGCCTCCTGCAGGAGCAGGTCCAGATGTTGCTGGAGGCTCAGAGGAAACTTCAGTCGTCGTCCGGCCAGCAGGTCGATACTCAGACACCCAAAAGCACCGCCAGCATCGCCGTGGGAACAGGTGCCAGTTTGTTCTGGGGGTCTCCGGTCCAGTTCCCCCTCCCACATCAGGAAGAACAGGCCCCTCGCCCTTCCTCACAGGCCGACCTGTCCGTCAACGGGCCTGGGGGCGGAGCCGAGAACAGTGACATCACAGCTCAAGAGGCTGCCTGCTCCCCCTCTGCTCAGCACAGCGTTAGCGGGCTGCAGAGTCCCGTCCTGGGAGAGAGTGTGAGCATGTACAGACCTGCAGACGACCAGCAGAGCTTCTTTAACAACCTGAtgACTCAGGTGACCAGTCGTCTCCAGGAGTCAGAGAGTAAACAGGaagtggaggaagaagaagaggaggaggagtccCGGAGGCGGAGCCTGTCTGTGGTTTCGGCCCAGTCGTCCCGGAGGAGGCGGAGCTGTGGAGGAGACTCGGTGCTCAGCGCCACCGTGaggcagctgcagcagctcggAGTCAACGTGGAAGAAGATCTGAGCGAGGCGGACCGGAGAAACCAGCAGACTATAGAGAGCAGCAGCACTCTGGCGGGTATCAACCCAGCGGCTGTTCTGTCCAGACTGAGCGTGTCCGAGTCCTCGGCGAGCTCTCTGTTCCCCGGTGCCAGCGTGGACCTGAGTCTGGAGGCCAACGCCATCGCGCTGCGCTACCTGAGCGACTCCCAGCTCAGCCGGCTGTCTCTGGGAGGCCACGCCCCCCAAACAGTCCCCGCCTCCGCCTCCAGCTCCAACCACTCCCTGCTGTCGCCTAGCAACATGTCCCTGGCCACCAGGAAGTACATGCGGCGCTACGGCCTCATCGAGGAAGAGGACGgcgaagaggaagaagaagaagtagttCGCCAGCCGTTCCTCCCACAGAGTCAGCTGATCCGCGACCTGCAGCCCAAAATGCCGCTGTACCCCGGCGGGAACAAAGCCAACGGCGCCAACAAGGAGAACCGGTCCAACCGGCATCCAGCGTCAGTCAGGACCGGCAGCCGCCAGACGGAGGGATCGGTAGGGAACATCCTGGACCTGAGCCGCCTCAGGCAGCTCCCCAAACTCTTCTGACTCCACATCCTGGACCTGAGCCGCCTCAGACAGCTGCCCAAACTCTTCTGACTCCACATCCTGGACCTGAGCCGCCTCAGACAGCTCCCCAAACTCTTCTGACTCCACATCCTGGACCTGGGCCGCCTCAGACAGCTGCCCAAACTCTTCTGACTCCACATCCTGGATCTGA

Function

GO: NA

KEGG:

id description
K16724 STIL; SCL-interrupting locus protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU124204 False 253 lncRNA 0.60 2 1874886 1876314
XM_039811456.1 True 3439 mRNA 0.61 18 1867721 1889087

Neighbor

gene id symbol gene type direction distance location
sid1 NA coding upstream 230223 1635963 ~ 1637498 (+)
LOC120565565 LOC108250349,LOC108249964 coding upstream 237041 1625574 ~ 1630680 (+)
LOC120565564 LOC102210819 coding upstream 292944 1537999 ~ 1574777 (+)
LOC120566171 LOC108248660 coding upstream 486807 1322405 ~ 1380914 (+)
plppr3b NA coding upstream 842578 1010747 ~ 1025143 (+)
serpinc1 NA coding downstream 2467 1891554 ~ 1908999 (+)
LOC120565574 NA coding downstream 91751 1980838 ~ 1993868 (+)
dph5 dph5,LOC102795811 coding downstream 161875 2050962 ~ 2071903 (+)
LOC120565427 NA coding downstream 523144 2412231 ~ 2420605 (+)
LOC120565428 NA coding downstream 534900 2423987 ~ 2427127 (+)
G92257 NA non-coding upstream 36864 1804469 ~ 1830857 (+)
G92248 NA non-coding upstream 89891 1743775 ~ 1777830 (+)
G92247 NA non-coding upstream 114769 1733566 ~ 1752952 (+)
LOC120565416 NA non-coding upstream 167219 1699420 ~ 1700502 (+)
G92228 NA non-coding upstream 207355 1659798 ~ 1660366 (+)
G92274 NA non-coding downstream 63899 1952986 ~ 1953927 (+)
G92275 NA non-coding downstream 70765 1959852 ~ 1960134 (+)
G92276 NA non-coding downstream 93430 1982517 ~ 1983028 (+)
G92279 NA non-coding downstream 120181 2009268 ~ 2048527 (+)
G92281 NA non-coding downstream 120892 2009979 ~ 2010670 (+)
G92234 NA other upstream 63326 1696974 ~ 1804395 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other upstream 331865 1463719 ~ 1535856 (+)
G92169 dbt,LOC102778223 other upstream 611527 1241387 ~ 1256194 (+)
trmt13 NA other upstream 639042 1220810 ~ 1228679 (+)
G92157 NA other upstream 663675 1202887 ~ 1204046 (+)
LOC120565575 NA other downstream 99721 1988808 ~ 2025931 (+)
G92293 NA other downstream 183095 2072182 ~ 2076104 (+)
G92333 NA other downstream 476812 2365899 ~ 2369672 (+)
reep6 reep6 other downstream 482901 2371988 ~ 2380260 (+)
G92575 NA other downstream 644657 2533744 ~ 2582371 (+)

Expression


Co-expression Network