G92782 (LOC103461136,LOC106954349)


Basic Information

Item Value
gene id G92782
gene name LOC103461136,LOC106954349
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3125889 ~ 3132204 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU125014
cgctggaTACAACCCATCAGGGTGGTAAATCTCTGCAGGATGACCCACTTCAGAAAGGTTGAAAATCACCAACTttcccctttttgtttttttaaagtaactatGGCAACCACATGGTCCCGTCAGAGCACACTGGAGGCTCCAAGACGACCGCTGCTCTCCCGGTCCGTTCCACATCCGGAGTCCCAATCCCGTCTCACtgatgcctgtctgtctgtcttcctgtccCCTGTAGCCAATGGCAACGACAGTAAGAAGTTCAAAGGCGACTTCAGAGGTCCCGGGCTGCCGTCCCGCGTCATCCACGTCCGCAAGCTTCCCAACGACATCAGCGAGGCCGAGGTCATCAGCCTGGGTCTGCCCTTCGGAGACGTCACCAACCTGCTGATGCTCAAAGCCAAAAACCAGGCCTTCTTGGAGATGAACTCGGAGGAAGCGGCCCAGAACATGGTGGCACTACTCCACGGTGATGCCCATCATCCGCCACCACCCGGTCCACCCAGTTCTCCAACCACAAGGAGCTCAAGACAGACAACTC

Function

NR:

description
PREDICTED: polypyrimidine tract-binding protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125014 True 538 TUCP 0.56 2 3125889 3132204

Neighbor

gene id symbol gene type direction distance location
LOC120565438 gadd45b coding upstream 123350 2999620 ~ 3002539 (+)
LOC120565437 LOC104954941,LOC104939024,LOC103367594,LOC105940182,LOC103463144 coding upstream 266771 2845744 ~ 2859118 (+)
LOC120565422 NA coding upstream 285030 2821642 ~ 2840859 (+)
LOC120565421 NA coding upstream 531906 2586515 ~ 2593983 (+)
LOC120565432 NA coding upstream 664292 2450531 ~ 2461597 (+)
LOC120565597 sgta coding downstream 85522 3217726 ~ 3574149 (+)
LOC120565455 patj,LOC104952322 coding downstream 205628 3337832 ~ 3348216 (+)
LOC120566051 NA coding downstream 497980 3630184 ~ 3633365 (+)
LOC120565880 LOC104960898 coding downstream 694659 3826863 ~ 3854810 (+)
LOC120565394 LOC104935534,LOC103395676,LOC104932847,LOC103395770 coding downstream 999659 4131863 ~ 4132573 (+)
G92789 NA non-coding upstream 58812 3026092 ~ 3067077 (+)
G92791 NA non-coding upstream 60773 3057413 ~ 3065116 (+)
G92785 NA non-coding upstream 92828 3026529 ~ 3033061 (+)
G92781 NA non-coding upstream 103680 3021516 ~ 3022209 (+)
G92779 NA non-coding upstream 117824 3007696 ~ 3008065 (+)
G92788 NA non-coding downstream 3212 3135416 ~ 3136578 (+)
G92786 NA non-coding downstream 33478 3165682 ~ 3172182 (+)
G92827 NA non-coding downstream 229888 3362092 ~ 3421936 (+)
G92839 NA non-coding downstream 272859 3405063 ~ 3452057 (+)
G92842 NA non-coding downstream 303733 3435937 ~ 3476682 (+)
G92773 NA other upstream 31479 3010674 ~ 3094410 (+)
G92770 NA other upstream 142875 2982226 ~ 2983014 (+)
G92575 NA other upstream 543518 2533744 ~ 2582371 (+)
reep6 reep6 other upstream 745629 2371988 ~ 2380260 (+)
G92333 NA other upstream 756217 2365899 ~ 2369672 (+)
G92826 NA other downstream 219563 3351767 ~ 3464206 (+)
G92838 NA other downstream 293530 3425734 ~ 3490621 (+)
LOC120565459 NA other downstream 407830 3540034 ~ 3595388 (+)
G92848 NA other downstream 468774 3600978 ~ 3606825 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other downstream 582715 3714919 ~ 3823782 (+)

Expression


Co-expression Network