G92788


Basic Information

Item Value
gene id G92788
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3135416 ~ 3136578 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU125036
ctaacacacaactacaataatttaacaaacagttacactattaacaagtaacaacaaaataaatgttgagttggtatggcaaccagcttcaaactttagcagttcttttgcagaaaaatgaccatatttgccttctctggcaagatactccacctctcctgacttatggcatgtaggcctactgcacaggagaaaactctctcaggtggtgtccaagaggtctgtacacacccaggtagGAGTTTAAAAGGgtagacaatttggggaggctgtcctgcctcccccaccaccaggctacaggctcttgaacgatagactagcagagtaagtgttaaatgtttactagcgatcacgtgcagtcggTGAacggttaatatgcttttacgtccgttttggtgagcccggagggaaaatatgccattttaaaagtagcctacatattcggtagctagctaacgatagACTACAGAGGGAGTGAGATATTTTTAagtccgtttcagagcgtgtacaGAAAGCCgactatcagcagtgattgtagagtagcatgtcgggggaatagcgcttcacaccgcgagcgggcacgtggccactcggcagaaaagggagaaagaagaagagtcTGCTGttgtccggagcgacagaggggaaatatttcagtcggaaccgaaattcgcgttctaatccggtccgaatactaccgtttgcgtaggaaccgggtttcggtacccaaccctactcacaAGACTTGTGGAACTAGTCTGCGTCGATATGAACGCGTCTGACATCGTGTATCAGGTGACCGTTGACACACTGGGCGCCTGCAGGATGCTGTAAACTGGAAGCAGGTTGTCTGATGTTACTCTGCGGTTGGAAATCATGGATGTAGAAGTTTAAAACGCAGACAATCCtcttggagaaagaacaacctGCAAGATTTATTATCAAGGTGGAACTGTTCCTGAAAGGTCTGTAAGATACCTAACTGATTAGACTGACTGaaggagagacaggcaggcagacagacagacacacagacagaccgacaaggtggaactgttactgaaaggtct

Function

NR:

description
PREDICTED: doublecortin domain-containing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125036 True 1070 lncRNA 0.46 2 3135416 3136578

Neighbor

gene id symbol gene type direction distance location
LOC120565438 gadd45b coding upstream 132877 2999620 ~ 3002539 (+)
LOC120565437 LOC104954941,LOC104939024,LOC103367594,LOC105940182,LOC103463144 coding upstream 276298 2845744 ~ 2859118 (+)
LOC120565422 NA coding upstream 294557 2821642 ~ 2840859 (+)
LOC120565421 NA coding upstream 541433 2586515 ~ 2593983 (+)
LOC120565432 NA coding upstream 673819 2450531 ~ 2461597 (+)
LOC120565597 sgta coding downstream 81148 3217726 ~ 3574149 (+)
LOC120565455 patj,LOC104952322 coding downstream 201254 3337832 ~ 3348216 (+)
LOC120566051 NA coding downstream 493606 3630184 ~ 3633365 (+)
LOC120565880 LOC104960898 coding downstream 690285 3826863 ~ 3854810 (+)
LOC120565394 LOC104935534,LOC103395676,LOC104932847,LOC103395770 coding downstream 995285 4131863 ~ 4132573 (+)
G92789 NA non-coding upstream 68339 3026092 ~ 3067077 (+)
G92791 NA non-coding upstream 70300 3057413 ~ 3065116 (+)
G92785 NA non-coding upstream 102355 3026529 ~ 3033061 (+)
G92781 NA non-coding upstream 113207 3021516 ~ 3022209 (+)
G92779 NA non-coding upstream 127351 3007696 ~ 3008065 (+)
G92786 NA non-coding downstream 29104 3165682 ~ 3172182 (+)
G92827 NA non-coding downstream 225514 3362092 ~ 3421936 (+)
G92839 NA non-coding downstream 268485 3405063 ~ 3452057 (+)
G92842 NA non-coding downstream 299359 3435937 ~ 3476682 (+)
G92857 NA non-coding downstream 337913 3474491 ~ 3477249 (+)
G92782 LOC103461136,LOC106954349 other upstream 3212 3125889 ~ 3132204 (+)
G92773 NA other upstream 41006 3010674 ~ 3094410 (+)
G92770 NA other upstream 152402 2982226 ~ 2983014 (+)
G92575 NA other upstream 553045 2533744 ~ 2582371 (+)
reep6 reep6 other upstream 755156 2371988 ~ 2380260 (+)
G92826 NA other downstream 215189 3351767 ~ 3464206 (+)
G92838 NA other downstream 289156 3425734 ~ 3490621 (+)
LOC120565459 NA other downstream 403456 3540034 ~ 3595388 (+)
G92848 NA other downstream 464400 3600978 ~ 3606825 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other downstream 578341 3714919 ~ 3823782 (+)

Expression


Co-expression Network